Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g07680.t01
CDS Infomation

cds chromosome:12X:8:21138702:21144717:-1 gene:VIT_08s0007g07680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small basic intrinsic protein 1 [Source:UniProtKB/TrEMBL;Acc:Q107W9]
Sequence

ATGGGTGTAATAAAGGCGGCGATTGGTGATGGGGTGTTGACTTTCATGTGGGTGTTCTGC
GTTTCGACGGTGGGGATATTCACCTCTCTCATATCGTCGGCCTTGGGGGTTCAGGCGCTG
CCGTTGGCTGCGATTTTCATCACCACTGTCCTTATCTTTGTTCTTGTGTTCGTGTTCAGC
GCGATAGGGGATGTCTTGGGTGGGGCCAGCTTCAATCCCACTGCAACTGCTGCGCTCTAT
GCCGCCGGTGTCACACCCGACAGCCTCATCTCCATGGCTTTCCGTTTTCCTGCTCAGGCA
GCTGGTGCTGTGGGTGGTGCCCTGGCAATCATGGAGGTGATGCCAACACAGTACAAACAC
ATGCTTGGGGGGCCTTCTTTGAAAGTGGACTTGCATACTGGAGCCATTGCTGAGGGGATT
TTGACCTTTACAATTAGCTTTCTCGTGCTTTTGGTTGTCCTCAAAGGTCCAAAGAGTCCA
GTATTGAAGACATGGTTGCTTGCCATGGCGACTGTAACTCTGGTCGTCTCAGGCTCTGCT
TACACTGGGCCTTCCATGAATCCCGCCAATGCATTTGGATGGGCATATATAAACAATTGG
CATAACACATGGGACCAGTTGTACGTTTACTGGATCTGCCCCTTCATAGGGGCAATATTG
GCTGCATGGGTCTTCCGATTCCTATTTCCAGCACCAACAAAGCAGAAGAAAGCCTGA

Peptide Sequence

PEP ID

VIT_08s0007g07680.t01
PEP Infomation

pep chromosome:12X:8:21138702:21144717:-1 gene:VIT_08s0007g07680 transcript:VIT_08s0007g07680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small basic intrinsic protein 1 [Source:UniProtKB/TrEMBL;Acc:Q107W9]
Sequence

MGVIKAAIGDGVLTFMWVFCVSTVGIFTSLISSALGVQALPLAAIFITTVLIFVLVFVFS
AIGDVLGGASFNPTATAALYAAGVTPDSLISMAFRFPAQAAGAVGGALAIMEVMPTQYKH
MLGGPSLKVDLHTGAIAEGILTFTISFLVLLVVLKGPKSPVLKTWLLAMATVTLVVSGSA
YTGPSMNPANAFGWAYINNWHNTWDQLYVYWICPFIGAILAAWVFRFLFPAPTKQKKA

Transcript Sequence

Transcript ID

VIT_08s0007g07680.t01
Transcript Infomation

cdna chromosome:12X:8:21138702:21144717:-1 gene:VIT_08s0007g07680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small basic intrinsic protein 1 [Source:UniProtKB/TrEMBL;Acc:Q107W9]
Sequence

AGGTAAGGTTGATCATCCATCCGGTGCAGGAAAGGCGGATATAGCCGTCTGTCTCTCTCC
GCACGAGGAGAGAAAAAGGGGAGGGGAAAGGGGGAGCCGAGAAGGATTTTGCGTTATTGA
GAGGGAGGATGGGTGTAATAAAGGCGGCGATTGGTGATGGGGTGTTGACTTTCATGTGGG
TGTTCTGCGTTTCGACGGTGGGGATATTCACCTCTCTCATATCGTCGGCCTTGGGGGTTC
AGGCGCTGCCGTTGGCTGCGATTTTCATCACCACTGTCCTTATCTTTGTTCTTGTGTTCG
TGTTCAGCGCGATAGGGGATGTCTTGGGTGGGGCCAGCTTCAATCCCACTGCAACTGCTG
CGCTCTATGCCGCCGGTGTCACACCCGACAGCCTCATCTCCATGGCTTTCCGTTTTCCTG
CTCAGGCAGCTGGTGCTGTGGGTGGTGCCCTGGCAATCATGGAGGTGATGCCAACACAGT
ACAAACACATGCTTGGGGGGCCTTCTTTGAAAGTGGACTTGCATACTGGAGCCATTGCTG
AGGGGATTTTGACCTTTACAATTAGCTTTCTCGTGCTTTTGGTTGTCCTCAAAGGTCCAA
AGAGTCCAGTATTGAAGACATGGTTGCTTGCCATGGCGACTGTAACTCTGGTCGTCTCAG
GCTCTGCTTACACTGGGCCTTCCATGAATCCCGCCAATGCATTTGGATGGGCATATATAA
ACAATTGGCATAACACATGGGACCAGTTGTACGTTTACTGGATCTGCCCCTTCATAGGGG
CAATATTGGCTGCATGGGTCTTCCGATTCCTATTTCCAGCACCAACAAAGCAGAAGAAAG
CCTGAGAAGGGGCATGAACTGAAATTCTATGTTAGTAGGTAAGTTAACTTAATAGGATTT
TATTCTATTTTCTGGTTGTGGGCTGAAACTATCATCTGTCTAGTGAATAAACGTGGAAGA
AGATGGAAGTAGAACAAATCTCTAGTGAATCATTGTGATGTAGATTTAAGTCGCATCTTG
AATTTGGGCCTTTGAGAACAAATTTGGCTTGATTGCTTGGAATCCCGCATTTTCTTCCTT
CAGGGTTTGATTTGGCCCAAACTATGCAAAGCTCTTTTTTTTTTTTTACCTTCGTTTTAT
TCAAGCTTTTTATTGGTGGACTCGATCTTATGGATCATGGTTGAGAGTATGTGATAGAAC
CGTTGATTAAATTATAAATCTGCCTCAGCCACTGTGATTTCGCA