Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g07570.t01
CDS Infomation

cds chromosome:12X:8:21051637:21067875:-1 gene:VIT_08s0007g07570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGGCGAGTCGAAAACTACAAGGCGAGATTGACAGGGTTCTGAAGAAGGTTCAGGAA
GGCGTGGATGTTTTCGATAGTATCTGGAACAAGGTTTACGACACGGATAATGCCAATCAG
AAGGAGAAGTTTGAGGCTGATTTGAAGAAGGAGATCAAGAAACTTCAGCGGTATAGAGAC
CAGATCAAGACATGGATTCAGTCCAGCGAGATCAAGGACAAGAAGGTTAGTGCCTCTTAT
GAGCAGGCTCTGCTGGATGCTCGGAAGCTTATCGAGCGTGAAATGGAAAGATTTAAGATA
TGTGAAAAAGAAACTAAGACAAAAGCATTCTCCAAAGAAGGGCTGGGCCAACAACCTAAA
ACTGACCCAAAGGAGAAGGCTAAATCAGAGACAAGGGACTGGTTGAACACTGTGGTGGGG
GAGTTGGAATCCCAAATTGATAGCTTTGAAGCTGAAATTGAAGGGCTATCTGTTAAAAAA
GGAAAGACAAGACCACCTAGACTGACACATTTGGAGACATCTATTGCTAGACACAAGGCT
CATATAATGAAGTTAGAACTGATTTTGAGGCTACTGGATAATGATGAATTGAGTCCTGAG
CAGGTCAATGATGTAAAAGACTTCTTGGATGATTATGTGGAACGTAATCAGGAGGACTTT
GAAGAATTTAGTGATGTAGATGACCTTTACAACTCTTTGCCATTAGACAAGGTGGAATCA
CTTGAAGATCTGGTTACAATTGGTGCTCCAGGCCTTGTTAAGGGTGCACCAGCTCTAAGC
TTGAAGAATTCTTTGACACCAACCCAAATACCGGCCACAGTCACATCTCCTCTTCAACAG
AGTACTTCCATCCAGGAACAATCCGAGGAGACAGCTTCACAGGACAGCAATTCTGAGATT
GGTCCAAGAACTCCACCTGCCAAAAATAGTGTAATTGGTTCTTCTGCTTCATCAACACCG
ACGGGGAGCCATGCAACTCCTATACCTTTGAATGTTTCAGCTCATAATTTGTCTGCATCA
CCTGCTCCGACAATTCTTCCCAGTTCTACTTCTGTTCGAGGTGTCCTGGAAAATGCTGGT
ACTGCTATTTCATCTCCTGTTAATGTGTCTAGTTCTGCAAAGGAAGAAGAGATTGCAAGC
TTCCCAGGCAGGAGATCTTCACCTGCTCTTGTTGAAACTGGACTAGTGAGGGGCATTGGT
AGAGGTGTTCCATCCAGCCAACCATCAACAAGTGTCCCACTTAGTTCTGGCATTACAATT
CCAAGCAATGGAGGCCTTGGTGCAGTTCCTTCAGCCAATGACATGTCAAAGAGAAGTACT
TTAGGTGCTGATGAGAGACTTGGGGGTGGTGGTATGGTGCAGCCTTTGGTTTCCCCACTG
AGTAATAGAATGATCTTGCCACAAACTGCCAAGACTAATGATGGAACTGGCTTGGCTGAT
TCTAGTAGTGTTGGAGAGGCTGCAGTCATAGCTGGCAGAGTCTTCTCTCCTTCTGTAGTT
CCTGGCATGCAATGGAGGCCAGGAAGTTCCTTTCAGAATCAAAATGAATCGGGACAGTTT
CGGGGAAGAACTGAAATTACACTTGATCAGAAGGAGAAATTTTTGCAGCGTCTCCAGCAA
GTGCAGCAACAAACTCAGAGTACCATTCTTGGTATGCCCCCTCTTTCTGGAGGAAATCAT
AAGCAGTTCTCTGCACAACAGCAAAACCCACTCTTGCAGCAGTTTAATTCTCAAAGCTCA
TCTGTCTCACCTCAAGTTGGTCTGGGAGTTGGAGTCCAGGCACCTGGTCTCAACACTGTT
ACATCTGCCGCCATACAGCAACAGCCAGGTTCCATCCACCAACAGTCTAATCAGCAAGCT
TTGTTATCTACTGGTCCAAAAGATGCTGATGTTGGCCATGTCAAAGCTGAGGACCAGCAG
CAACAACAAAATGTATCTGATGACTCGACAATGGAATCTGCTCCTAGTTCTCTTGGAAAG
AATCTCATGAATGAGGATGATTTGAAAGCTCCATATGCAATGGACACATCTGCAGGAGTA
TCTGGCTCTTTGACAGAGCCTTCCCAAGTGCCAAGAGATACTGATCTCTCTCCTGGGCAA
CCTGTACAATCTAACCAACCTTCTGGCAGCCTTGGTGTTATTGGTCGAAGAAGCATATCT
GACCTTGGTGCAATAGGTGATACCCTCAGTGGATCAGCTGTGAATTCTGGGGGGATGCAT
GATCAGCTTTACAATCTACAGATGCTTGAGGCTGCTTTTTACAAGCTTCCTCAACCTAAA
GACTCGGAACGTGCAAGGAACTATACTCCAAGGCACCCTGCTGTGACCCCTCCAAGCTAT
CCTCAAGTACAGGCACCCATTGTCAATAATCCTGCCTTCTGGGAACGGCTGGGTCTTGAT
ACTTTTGGCACTGACACCCTGTTCTTTGCATTTTACTATCAGCAGAATACTTATCAGCAA
TATTTGGCTGCAAAAGAACTAAAGAAGCAATCGTGGAGATACCACAGGAAATATAACACA
TGGTTTCAGAGGCATGAGGAGCCAAAAGTTGCCACTGATGAATTTGAACAGGGGACATAT
GTGTACTTTGATTTCCATATTGCTAATGATGACCTACAACATGGATGGTGCCAGAGGATC
AAGACTGAATTCACTTTTGAATATAACTATCTCGAAGATGAACTTATTGTATAG

Peptide Sequence

PEP ID

VIT_08s0007g07570.t01
PEP Infomation

pep chromosome:12X:8:21051637:21067875:-1 gene:VIT_08s0007g07570 transcript:VIT_08s0007g07570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNTVVGELESQIDSFEAEIEGLSVKKGKTRPPRLTHLETSIARHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFEEFSDVDDLYNSLPLDKVES
LEDLVTIGAPGLVKGAPALSLKNSLTPTQIPATVTSPLQQSTSIQEQSEETASQDSNSEI
GPRTPPAKNSVIGSSASSTPTGSHATPIPLNVSAHNLSASPAPTILPSSTSVRGVLENAG
TAISSPVNVSSSAKEEEIASFPGRRSSPALVETGLVRGIGRGVPSSQPSTSVPLSSGITI
PSNGGLGAVPSANDMSKRSTLGADERLGGGGMVQPLVSPLSNRMILPQTAKTNDGTGLAD
SSSVGEAAVIAGRVFSPSVVPGMQWRPGSSFQNQNESGQFRGRTEITLDQKEKFLQRLQQ
VQQQTQSTILGMPPLSGGNHKQFSAQQQNPLLQQFNSQSSSVSPQVGLGVGVQAPGLNTV
TSAAIQQQPGSIHQQSNQQALLSTGPKDADVGHVKAEDQQQQQNVSDDSTMESAPSSLGK
NLMNEDDLKAPYAMDTSAGVSGSLTEPSQVPRDTDLSPGQPVQSNQPSGSLGVIGRRSIS
DLGAIGDTLSGSAVNSGGMHDQLYNLQMLEAAFYKLPQPKDSERARNYTPRHPAVTPPSY
PQVQAPIVNNPAFWERLGLDTFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNT
WFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV

Transcript Sequence

Transcript ID

VIT_08s0007g07570.t01
Transcript Infomation

cdna chromosome:12X:8:21051637:21067875:-1 gene:VIT_08s0007g07570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGTGGAATGGGGGCGAGTCGAAAACTACAAGGCGAGATTGACAGGGTTCTGAAGAAGGT
TCAGGAAGGCGTGGATGTTTTCGATAGTATCTGGAACAAGGTTTACGACACGGATAATGC
CAATCAGAAGGAGAAGTTTGAGGCTGATTTGAAGAAGGAGATCAAGAAACTTCAGCGGTA
TAGAGACCAGATCAAGACATGGATTCAGTCCAGCGAGATCAAGGACAAGAAGGTTAGTGC
CTCTTATGAGCAGGCTCTGCTGGATGCTCGGAAGCTTATCGAGCGTGAAATGGAAAGATT
TAAGATATGTGAAAAAGAAACTAAGACAAAAGCATTCTCCAAAGAAGGGCTGGGCCAACA
ACCTAAAACTGACCCAAAGGAGAAGGCTAAATCAGAGACAAGGGACTGGTTGAACACTGT
GGTGGGGGAGTTGGAATCCCAAATTGATAGCTTTGAAGCTGAAATTGAAGGGCTATCTGT
TAAAAAAGGAAAGACAAGACCACCTAGACTGACACATTTGGAGACATCTATTGCTAGACA
CAAGGCTCATATAATGAAGTTAGAACTGATTTTGAGGCTACTGGATAATGATGAATTGAG
TCCTGAGCAGGTCAATGATGTAAAAGACTTCTTGGATGATTATGTGGAACGTAATCAGGA
GGACTTTGAAGAATTTAGTGATGTAGATGACCTTTACAACTCTTTGCCATTAGACAAGGT
GGAATCACTTGAAGATCTGGTTACAATTGGTGCTCCAGGCCTTGTTAAGGGTGCACCAGC
TCTAAGCTTGAAGAATTCTTTGACACCAACCCAAATACCGGCCACAGTCACATCTCCTCT
TCAACAGAGTACTTCCATCCAGGAACAATCCGAGGAGACAGCTTCACAGGACAGCAATTC
TGAGATTGGTCCAAGAACTCCACCTGCCAAAAATAGTGTAATTGGTTCTTCTGCTTCATC
AACACCGACGGGGAGCCATGCAACTCCTATACCTTTGAATGTTTCAGCTCATAATTTGTC
TGCATCACCTGCTCCGACAATTCTTCCCAGTTCTACTTCTGTTCGAGGTGTCCTGGAAAA
TGCTGGTACTGCTATTTCATCTCCTGTTAATGTGTCTAGTTCTGCAAAGGAAGAAGAGAT
TGCAAGCTTCCCAGGCAGGAGATCTTCACCTGCTCTTGTTGAAACTGGACTAGTGAGGGG
CATTGGTAGAGGTGTTCCATCCAGCCAACCATCAACAAGTGTCCCACTTAGTTCTGGCAT
TACAATTCCAAGCAATGGAGGCCTTGGTGCAGTTCCTTCAGCCAATGACATGTCAAAGAG
AAGTACTTTAGGTGCTGATGAGAGACTTGGGGGTGGTGGTATGGTGCAGCCTTTGGTTTC
CCCACTGAGTAATAGAATGATCTTGCCACAAACTGCCAAGACTAATGATGGAACTGGCTT
GGCTGATTCTAGTAGTGTTGGAGAGGCTGCAGTCATAGCTGGCAGAGTCTTCTCTCCTTC
TGTAGTTCCTGGCATGCAATGGAGGCCAGGAAGTTCCTTTCAGAATCAAAATGAATCGGG
ACAGTTTCGGGGAAGAACTGAAATTACACTTGATCAGAAGGAGAAATTTTTGCAGCGTCT
CCAGCAAGTGCAGCAACAAACTCAGAGTACCATTCTTGGTATGCCCCCTCTTTCTGGAGG
AAATCATAAGCAGTTCTCTGCACAACAGCAAAACCCACTCTTGCAGCAGTTTAATTCTCA
AAGCTCATCTGTCTCACCTCAAGTTGGTCTGGGAGTTGGAGTCCAGGCACCTGGTCTCAA
CACTGTTACATCTGCCGCCATACAGCAACAGCCAGGTTCCATCCACCAACAGTCTAATCA
GCAAGCTTTGTTATCTACTGGTCCAAAAGATGCTGATGTTGGCCATGTCAAAGCTGAGGA
CCAGCAGCAACAACAAAATGTATCTGATGACTCGACAATGGAATCTGCTCCTAGTTCTCT
TGGAAAGAATCTCATGAATGAGGATGATTTGAAAGCTCCATATGCAATGGACACATCTGC
AGGAGTATCTGGCTCTTTGACAGAGCCTTCCCAAGTGCCAAGAGATACTGATCTCTCTCC
TGGGCAACCTGTACAATCTAACCAACCTTCTGGCAGCCTTGGTGTTATTGGTCGAAGAAG
CATATCTGACCTTGGTGCAATAGGTGATACCCTCAGTGGATCAGCTGTGAATTCTGGGGG
GATGCATGATCAGCTTTACAATCTACAGATGCTTGAGGCTGCTTTTTACAAGCTTCCTCA
ACCTAAAGACTCGGAACGTGCAAGGAACTATACTCCAAGGCACCCTGCTGTGACCCCTCC
AAGCTATCCTCAAGTACAGGCACCCATTGTCAATAATCCTGCCTTCTGGGAACGGCTGGG
TCTTGATACTTTTGGCACTGACACCCTGTTCTTTGCATTTTACTATCAGCAGAATACTTA
TCAGCAATATTTGGCTGCAAAAGAACTAAAGAAGCAATCGTGGAGATACCACAGGAAATA
TAACACATGGTTTCAGAGGCATGAGGAGCCAAAAGTTGCCACTGATGAATTTGAACAGGG
GACATATGTGTACTTTGATTTCCATATTGCTAATGATGACCTACAACATGGATGGTGCCA
GAGGATCAAGACTGAATTCACTTTTGAATATAACTATCTCGAAGATGAACTTATTGTATA
GAAGATGAACAAAAGATTCTACATCGATGATCATTGTTGACACTTGGTTTGTACCATGCC
CACTATGCTAGATTTTATGTCAGCAAGTTTCTGTTACTTGGAATACTAGTACTGCCATTT
AAATTGTGATTTG