Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g07260.t01
CDS Infomation

cds chromosome:12X:8:20881458:20884063:-1 gene:VIT_08s0007g07260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin alpha chain [Source:UniProtKB/TrEMBL;Acc:D7TI76]
Sequence

ATGAGAGAGGTGATAAGCATACACATTGGGCAAGCTGGGATCCAAGTGGGAAATGAATGT
TGGGAACTTTTCTGCCTTGAACATGGCATTCAATCTGATGGCATGATGCCCAGTGGCACC
TCTAATGGTGCTGGCCATGATGCTTTTAATACTTTCTTCAGCGAGACCGACGCCGGTAAA
TATGTGCCTAGAGCTGTCTTTGTTGATCTTGAACCTAGTGTTATCGATGAAGTTCGGACA
GGGGTCTATAAACAACTCTTCCATCCTGAGCAGCTCATATCTGGCAAGGAAGATGCTGCT
AATAACTATGCCCGGGGACATTATACAGTGGGGAAAGATATTGTGGATTTGTGCCTTGAT
CGAGTCAGAAAATTAGCGGACGTTTGCTCTGGCTTGCAAGGGTTTTTGGTGTTTAATGCT
GTGGGTGGTGGCACTGGTTCTGGATTTGGGTCCTTGGTTCTTGAACGCCTCTCTGCAGAT
TATGGAAAGAAGTCAAAACTTGGGTTTACCATCTATCCTTCTCCTCAGGTTTCTACAGCA
GTTGTGGAGCCTTACAACAGTGTGCTGTCCACTCATTCCCTCCTTGAACACACAGATGTG
GCTGTGCTTTTGGACAATGAAGCCATTTACGATATCTGCAGGCGATCCTTAGACCTTGAA
AGGCCAACCTACACTAACTTGAACCGCTTAATATCCCAAATCATATCTTCAATCACCACT
TCCTTGAGATTCGATGGAGCCATTAATGTGGACATTACAGAATTCCAAACTAACCTTGTC
CCATATCCTCGAATACATTTCATGTTATCATCTTACGCCCCGGTGATCTCAGCTGCAAAG
GTTTACCATGAGCAGCTCTCAGTCCCTGAGATCACAACTGCTGTGTTTGAGCCCTCAAGC
ATGATGGCAAAGTGTGACCCAAGGCATGGAAAGTACATGGCCTGCTGTTTGATGTATCGG
GGAGACGTAGTTCCAAAGGATGTCAATGCTTCCGTTGCTAACATCAAGACTAAGAGGACG
GTTCAATTCGTTGACTGGTGCCCAACTGGTTTCAAGTGCGGTATCAATTACCAGGCCCCA
ACAGCGGTTCCTGGGGCCGAACTGGCTAAGGTGAAGAGAGCAGTATGTATGATAAGCAAC
AACACAGCTGTTGCTGAGGTTTTTGAGAGAATTACCCACAAGTTTGATCTCATGTATGTG
AAGCGAGCGTTCGTGCACTGGTATGTGGGAGAAGGAATGGAGGAAGGTGAATTCTCTGAA
GCCCGGGAGGATCTTGCCACTCTGGAGAAAGACTATGAGGAAGTTGTGGCAGAAGCTATT
GATATCGAGGCAGAGGAATGA

Peptide Sequence

PEP ID

VIT_08s0007g07260.t01
PEP Infomation

pep chromosome:12X:8:20881458:20884063:-1 gene:VIT_08s0007g07260 transcript:VIT_08s0007g07260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin alpha chain [Source:UniProtKB/TrEMBL;Acc:D7TI76]
Sequence

MREVISIHIGQAGIQVGNECWELFCLEHGIQSDGMMPSGTSNGAGHDAFNTFFSETDAGK
YVPRAVFVDLEPSVIDEVRTGVYKQLFHPEQLISGKEDAANNYARGHYTVGKDIVDLCLD
RVRKLADVCSGLQGFLVFNAVGGGTGSGFGSLVLERLSADYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDLERPTYTNLNRLISQIISSITT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKVYHEQLSVPEITTAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNASVANIKTKRTVQFVDWCPTGFKCGINYQAP
TAVPGAELAKVKRAVCMISNNTAVAEVFERITHKFDLMYVKRAFVHWYVGEGMEEGEFSE
AREDLATLEKDYEEVVAEAIDIEAEE

Transcript Sequence

Transcript ID

VIT_08s0007g07260.t01
Transcript Infomation

cdna chromosome:12X:8:20881458:20884063:-1 gene:VIT_08s0007g07260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tubulin alpha chain [Source:UniProtKB/TrEMBL;Acc:D7TI76]
Sequence

AAGAGAAAGAATGAGAGAGGTGATAAGCATACACATTGGGCAAGCTGGGATCCAAGTGGG
AAATGAATGTTGGGAACTTTTCTGCCTTGAACATGGCATTCAATCTGATGGCATGATGCC
CAGTGGCACCTCTAATGGTGCTGGCCATGATGCTTTTAATACTTTCTTCAGCGAGACCGA
CGCCGGTAAATATGTGCCTAGAGCTGTCTTTGTTGATCTTGAACCTAGTGTTATCGATGA
AGTTCGGACAGGGGTCTATAAACAACTCTTCCATCCTGAGCAGCTCATATCTGGCAAGGA
AGATGCTGCTAATAACTATGCCCGGGGACATTATACAGTGGGGAAAGATATTGTGGATTT
GTGCCTTGATCGAGTCAGAAAATTAGCGGACGTTTGCTCTGGCTTGCAAGGGTTTTTGGT
GTTTAATGCTGTGGGTGGTGGCACTGGTTCTGGATTTGGGTCCTTGGTTCTTGAACGCCT
CTCTGCAGATTATGGAAAGAAGTCAAAACTTGGGTTTACCATCTATCCTTCTCCTCAGGT
TTCTACAGCAGTTGTGGAGCCTTACAACAGTGTGCTGTCCACTCATTCCCTCCTTGAACA
CACAGATGTGGCTGTGCTTTTGGACAATGAAGCCATTTACGATATCTGCAGGCGATCCTT
AGACCTTGAAAGGCCAACCTACACTAACTTGAACCGCTTAATATCCCAAATCATATCTTC
AATCACCACTTCCTTGAGATTCGATGGAGCCATTAATGTGGACATTACAGAATTCCAAAC
TAACCTTGTCCCATATCCTCGAATACATTTCATGTTATCATCTTACGCCCCGGTGATCTC
AGCTGCAAAGGTTTACCATGAGCAGCTCTCAGTCCCTGAGATCACAACTGCTGTGTTTGA
GCCCTCAAGCATGATGGCAAAGTGTGACCCAAGGCATGGAAAGTACATGGCCTGCTGTTT
GATGTATCGGGGAGACGTAGTTCCAAAGGATGTCAATGCTTCCGTTGCTAACATCAAGAC
TAAGAGGACGGTTCAATTCGTTGACTGGTGCCCAACTGGTTTCAAGTGCGGTATCAATTA
CCAGGCCCCAACAGCGGTTCCTGGGGCCGAACTGGCTAAGGTGAAGAGAGCAGTATGTAT
GATAAGCAACAACACAGCTGTTGCTGAGGTTTTTGAGAGAATTACCCACAAGTTTGATCT
CATGTATGTGAAGCGAGCGTTCGTGCACTGGTATGTGGGAGAAGGAATGGAGGAAGGTGA
ATTCTCTGAAGCCCGGGAGGATCTTGCCACTCTGGAGAAAGACTATGAGGAAGTTGTGGC
AGAAGCTATTGATATCGAGGCAGAGGAATGAGA