Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_08s0007g07180.t01
CDS Infomation	cds chromosome:12X:8:20821577:20826139:-1 gene:VIT_08s0007g07180 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/TrEMBL;Acc:F6HLF0]
Sequence	ATGTCATCACGTTTTTGGACTGCTCAGGGTGACAGTGACACTGAGGAGGAGGAGAGTGAT TATGAGGATGGAGTTGAAAGGGGAGGAGCAGCAGGTGAGTCTGCACCACATGCTGGCAGC AGATACCTACAGGCTAATGCTAGTGATAGTGATGATTCTGATGGTCAAAAGCGTGTTGTG CGATCTGCTAAAGACAAGCGGTTTGAGGAGATGTCTGCTACTGTTGATCAGATGAAGAAT GCTATGAAGATCAATGACTGGGTCAGCCTACAAGAGAGCTTTGACAAAATAAATAAGCAG CTTGAGAAAGTCATGCGGGTTACAGAATCTGATAAAGTTCCTACCCTTTACATTAAGGCG CTTGTGATGTTGGAGGACTTTTTGAGTCAGGCTTTGGCAAATAAGGATGCCAAGAAGAAG ATGAGTAGTAGTAATGCCAAGGCCCTGAACTCAATGAAACAGAAATTGAAGAAGAACAAT AAGCAGTATGAAGATCTGATTAATAAGTATAGGGAACATCCTGAGAGCGAAGAAGAAGGT GATGAGGATGAGGAGATGGAGGAGGATGAGGATTCTGGCTCAGAGTTTGAGGAGGACCCT TCAAAAATTGCAATGAGATCAGATTCTGAAGAAGACGAGGAGGATGGAGAGGATAGAGAA GATAGTGCTGCTGAAGCTGGTGGGGGTTGGGAGAAAAAGATGAGCAAGAAAGATAAGCTA ATGGACAAGCAGTTCATGAAGGACCCAAGTGAGATTACATGGGATACGGTTAACAAGAAA TTCAAGGAGATTGTGGCTGTTCGTGGTAGGAAAGGAACTGGAAGGATTGAGCAGGTCGAA CAGCTTACTTTCTTGACAAGGGTTGCCAAGACCCCTGCCCAGAAGCTGGAGATCCTTTTC AGTGTCGTTTCTGCTCAGTTTGATGTTAATCCAAGTCTTAGTGGGCACATGCCAATAAAT GTGTGGAAGAAGTGTGTGCAGAATATGCTTGTTATACTTGACATTCTAGTTCAGCATTCA AACATTTTGGTGGATGATGTTGTTGAGCCTGAAGAGAATGAAACCCAAAAAGGAGCAGAC TATAAGGGGACAATTCGAGTTTGGGGAAATTTGGTTGCCTTCCTTGAGAGGATAGATGTG GAGTTCTTTAAGAGCTTGCAGTGCATTGATCCACACACTCGCGAGTATGTTGAAAGACTG AGGGATGAGCCTTTGTTTCTTGTGCTTGCCCAAAATGTCCAGGATTATTTAGAGCGAGTC GGGGATTTCAAGGCTGCTTCAAAGGTAGCTCTGAGGCGGGTTGAGCTCATCTATTATAAA CCACAGGAGGTGTATGACGCAATGAAAAATTTGGCTGAACAAACAGAAGATACAGAGAAC GGAGAATCAGAGGCAGGTGAGGAGCCCAGAGTTGAAGAAAGTAGGGGTCCACCTGCATTT GTTGTTACTCCTGAGGTGGTGCCTCGAAAACCCACATTTCCAGAGAATAGTAGGACTCTG ATGGATATTCTAGTTTCCCTCATATACAATCATGGGGATGAACGGACTAAGGCTCGGGCT ATGCTCTGTGACATTTACCACCATGCTATCCTGGATGAGTTTTCAACTGCCCGTGATCTG TTGCTGATGAGTCACTTGCAGGACAATGTTCAGCATATGGACATTTCAACGCAGATCCTT TTTAACAGGGCCATGGCACAGCTTGGACTGTGTGCATTTAGGGTTGGACTGATTGCTGAA GGACATGGTTGCCTGTCTGAACTATATTCAGGAGGGAGAGTAAAGGAATTGCTCGCACAA GGTGTTTCACAAAGTCGGTACCACGAGAAGACTCCAGAGCAGGAGAGGATTGAAAGGAGA CGACAGATGCCTTACCACATGCACATAAATCTTGAGCTCCTGGAGGGAGTCCATCTAATA TGTGCCATGCTCCTGGAGGTCCCAAACATGGCTGCCAATACGCACGATGCCAAGCGCAAG GTTATAAGTAAAACATTTCGGCGGTTGCTTGAGGTGAGTGAAAGGCAGACATTCACTGGC CCACCTGAAAATGTTAGAGACCATGTAATGGCTGCCACCAGGGCCCTTAGCAAGGGGGAC TTCCAGAAAGCCTTTGATGTTATCAAGTCCCTTGATTTTTGGAAGCTCCTCAGGAACCGT GAGGATGTCCTTGAGATGCTGAGGGCGAAGATAAAGGAAGAGGCTCTGAGGACCTACCTT TTTACCTACTCATTATCCTATAATACTCTGAGCTTGGACCAGCTTACCAAAATGTTTGAC CTTTCAGAAACTCTGACCCACAGTATCATCAGTAAGATGATGGTCATGGAAGAGTTGCAT GCAAGCTGGGACCAGCCCACCCGTTGCATTGTTTTCCATGATGTGGAGCACACAAGGCTG CAGGCCTTGTCATTCCAGCTGACAGACAAGCTGACAATTCTTGCAGAAAACAACGAGCGG GCATATGAGGCTAAAATAGGTGGTGGTGGGTTGGATCTGCCACTAAGGCGGAGGGATGGC CAGGATTATGCTGGTGCAGCTTCTGTTGGTGGTAAATGGCAGGACAACTTTTCTTTCAGT CAGGGAAGGCAAGGTGGTGTGCGCACTGGATATGGTGTGGGTGGGAGGCCATTAGGTCCT GGCTCTTCTGCAGGCACCTTTTCAAGGGACAGAGGTGGTCAGTCACGAGGAACAGGAGGC TATTCAGGGGGCTACCAGAGCACTCGGTATCAAGATGCTGCATATGGGAGGACTGCTTAT CAGACTAGTTCAGCTGTAAGGGGATCCCAGATGGATACTTCAACCCGCATGGTCAGTCTG AACAGGGGTGTTCGTGCTTAG

Peptide Sequence

PEP ID	VIT_08s0007g07180.t01
PEP Infomation	pep chromosome:12X:8:20821577:20826139:-1 gene:VIT_08s0007g07180 transcript:VIT_08s0007g07180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/TrEMBL;Acc:F6HLF0]
Sequence	MSSRFWTAQGDSDTEEEESDYEDGVERGGAAGESAPHAGSRYLQANASDSDDSDGQKRVV RSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESDKVPTLYIKA LVMLEDFLSQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKYREHPESEEEG DEDEEMEEDEDSGSEFEEDPSKIAMRSDSEEDEEDGEDREDSAAEAGGGWEKKMSKKDKL MDKQFMKDPSEITWDTVNKKFKEIVAVRGRKGTGRIEQVEQLTFLTRVAKTPAQKLEILF SVVSAQFDVNPSLSGHMPINVWKKCVQNMLVILDILVQHSNILVDDVVEPEENETQKGAD YKGTIRVWGNLVAFLERIDVEFFKSLQCIDPHTREYVERLRDEPLFLVLAQNVQDYLERV GDFKAASKVALRRVELIYYKPQEVYDAMKNLAEQTEDTENGESEAGEEPRVEESRGPPAF VVTPEVVPRKPTFPENSRTLMDILVSLIYNHGDERTKARAMLCDIYHHAILDEFSTARDL LLMSHLQDNVQHMDISTQILFNRAMAQLGLCAFRVGLIAEGHGCLSELYSGGRVKELLAQ GVSQSRYHEKTPEQERIERRRQMPYHMHINLELLEGVHLICAMLLEVPNMAANTHDAKRK VISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLLRNR EDVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLTHSIISKMMVMEELH ASWDQPTRCIVFHDVEHTRLQALSFQLTDKLTILAENNERAYEAKIGGGGLDLPLRRRDG QDYAGAASVGGKWQDNFSFSQGRQGGVRTGYGVGGRPLGPGSSAGTFSRDRGGQSRGTGG YSGGYQSTRYQDAAYGRTAYQTSSAVRGSQMDTSTRMVSLNRGVRA

Transcript Sequence

Transcript ID	VIT_08s0007g07180.t01
Transcript Infomation	cdna chromosome:12X:8:20821577:20826139:-1 gene:VIT_08s0007g07180 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/TrEMBL;Acc:F6HLF0]
Sequence	TCACTTGCCCCCGCTATCGTCTTCTCTCTCTCGAACTCCAGATTTGTTTTGGAACCTGGT TAGTTTGGGTGGCAAGATATTTTTCTGATTCCTGATTTCTGAATTGTGAAATCTAGCAGA GAGAGATGTCATCACGTTTTTGGACTGCTCAGGGTGACAGTGACACTGAGGAGGAGGAGA GTGATTATGAGGATGGAGTTGAAAGGGGAGGAGCAGCAGGTGAGTCTGCACCACATGCTG GCAGCAGATACCTACAGGCTAATGCTAGTGATAGTGATGATTCTGATGGTCAAAAGCGTG TTGTGCGATCTGCTAAAGACAAGCGGTTTGAGGAGATGTCTGCTACTGTTGATCAGATGA AGAATGCTATGAAGATCAATGACTGGGTCAGCCTACAAGAGAGCTTTGACAAAATAAATA AGCAGCTTGAGAAAGTCATGCGGGTTACAGAATCTGATAAAGTTCCTACCCTTTACATTA AGGCGCTTGTGATGTTGGAGGACTTTTTGAGTCAGGCTTTGGCAAATAAGGATGCCAAGA AGAAGATGAGTAGTAGTAATGCCAAGGCCCTGAACTCAATGAAACAGAAATTGAAGAAGA ACAATAAGCAGTATGAAGATCTGATTAATAAGTATAGGGAACATCCTGAGAGCGAAGAAG AAGGTGATGAGGATGAGGAGATGGAGGAGGATGAGGATTCTGGCTCAGAGTTTGAGGAGG ACCCTTCAAAAATTGCAATGAGATCAGATTCTGAAGAAGACGAGGAGGATGGAGAGGATA GAGAAGATAGTGCTGCTGAAGCTGGTGGGGGTTGGGAGAAAAAGATGAGCAAGAAAGATA AGCTAATGGACAAGCAGTTCATGAAGGACCCAAGTGAGATTACATGGGATACGGTTAACA AGAAATTCAAGGAGATTGTGGCTGTTCGTGGTAGGAAAGGAACTGGAAGGATTGAGCAGG TCGAACAGCTTACTTTCTTGACAAGGGTTGCCAAGACCCCTGCCCAGAAGCTGGAGATCC TTTTCAGTGTCGTTTCTGCTCAGTTTGATGTTAATCCAAGTCTTAGTGGGCACATGCCAA TAAATGTGTGGAAGAAGTGTGTGCAGAATATGCTTGTTATACTTGACATTCTAGTTCAGC ATTCAAACATTTTGGTGGATGATGTTGTTGAGCCTGAAGAGAATGAAACCCAAAAAGGAG CAGACTATAAGGGGACAATTCGAGTTTGGGGAAATTTGGTTGCCTTCCTTGAGAGGATAG ATGTGGAGTTCTTTAAGAGCTTGCAGTGCATTGATCCACACACTCGCGAGTATGTTGAAA GACTGAGGGATGAGCCTTTGTTTCTTGTGCTTGCCCAAAATGTCCAGGATTATTTAGAGC GAGTCGGGGATTTCAAGGCTGCTTCAAAGGTAGCTCTGAGGCGGGTTGAGCTCATCTATT ATAAACCACAGGAGGTGTATGACGCAATGAAAAATTTGGCTGAACAAACAGAAGATACAG AGAACGGAGAATCAGAGGCAGGTGAGGAGCCCAGAGTTGAAGAAAGTAGGGGTCCACCTG CATTTGTTGTTACTCCTGAGGTGGTGCCTCGAAAACCCACATTTCCAGAGAATAGTAGGA CTCTGATGGATATTCTAGTTTCCCTCATATACAATCATGGGGATGAACGGACTAAGGCTC GGGCTATGCTCTGTGACATTTACCACCATGCTATCCTGGATGAGTTTTCAACTGCCCGTG ATCTGTTGCTGATGAGTCACTTGCAGGACAATGTTCAGCATATGGACATTTCAACGCAGA TCCTTTTTAACAGGGCCATGGCACAGCTTGGACTGTGTGCATTTAGGGTTGGACTGATTG CTGAAGGACATGGTTGCCTGTCTGAACTATATTCAGGAGGGAGAGTAAAGGAATTGCTCG CACAAGGTGTTTCACAAAGTCGGTACCACGAGAAGACTCCAGAGCAGGAGAGGATTGAAA GGAGACGACAGATGCCTTACCACATGCACATAAATCTTGAGCTCCTGGAGGGAGTCCATC TAATATGTGCCATGCTCCTGGAGGTCCCAAACATGGCTGCCAATACGCACGATGCCAAGC GCAAGGTTATAAGTAAAACATTTCGGCGGTTGCTTGAGGTGAGTGAAAGGCAGACATTCA CTGGCCCACCTGAAAATGTTAGAGACCATGTAATGGCTGCCACCAGGGCCCTTAGCAAGG GGGACTTCCAGAAAGCCTTTGATGTTATCAAGTCCCTTGATTTTTGGAAGCTCCTCAGGA ACCGTGAGGATGTCCTTGAGATGCTGAGGGCGAAGATAAAGGAAGAGGCTCTGAGGACCT ACCTTTTTACCTACTCATTATCCTATAATACTCTGAGCTTGGACCAGCTTACCAAAATGT TTGACCTTTCAGAAACTCTGACCCACAGTATCATCAGTAAGATGATGGTCATGGAAGAGT TGCATGCAAGCTGGGACCAGCCCACCCGTTGCATTGTTTTCCATGATGTGGAGCACACAA GGCTGCAGGCCTTGTCATTCCAGCTGACAGACAAGCTGACAATTCTTGCAGAAAACAACG AGCGGGCATATGAGGCTAAAATAGGTGGTGGTGGGTTGGATCTGCCACTAAGGCGGAGGG ATGGCCAGGATTATGCTGGTGCAGCTTCTGTTGGTGGTAAATGGCAGGACAACTTTTCTT TCAGTCAGGGAAGGCAAGGTGGTGTGCGCACTGGATATGGTGTGGGTGGGAGGCCATTAG GTCCTGGCTCTTCTGCAGGCACCTTTTCAAGGGACAGAGGTGGTCAGTCACGAGGAACAG GAGGCTATTCAGGGGGCTACCAGAGCACTCGGTATCAAGATGCTGCATATGGGAGGACTG CTTATCAGACTAGTTCAGCTGTAAGGGGATCCCAGATGGATACTTCAACCCGCATGGTCA GTCTGAACAGGGGTGTTCGTGCTTAGTGTAGTAAATCAAAAGTTGAATTGGACACAGTTA CGTGGTGTGGTTTTGGCTCTTCAAAAGCAGGTTCTGCTCCATTGGATCTGATTTTGAATT TTTTCTAGTAAGCTATAAAATTTGTTAAGGCACAAGTTTATTTATATCTTTTTAATTATG TACTTGCGGCAATTAAAAGACCGGGAAATGCAGCGAGTAGCTTCTAATGTTGGTTTACTT ATATTCAGATTGGT