Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g06150.t01
CDS Infomation

cds chromosome:12X:8:19956815:19960291:-1 gene:VIT_08s0007g06150 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L6 [Source:UniProtKB/TrEMBL;Acc:F6HLL3]
Sequence

ATGGCACCAAGGAAAACCCCAAGAACAAGCCGAAACCCGGATCTGATTCGCGGCGTCGGC
AAGTTCTCTAGATCGAAAATGTACCACAAGCGTGGTCTCTGGGCCATCAAGGCTAAAAAC
GGCGGTGTTTTCCCTTGCCACGAGAAGAAGCCGGTGGCTCCAGCTCCATTGGAGAAGCTG
CCAAAGTTCTACCCGGCCGATGATGTCAAGAAGCCATTGATCAATAAGCACAAAGCCAAG
CCGACCAAACTCAGGGCAAGTATTACACCTGGAACGGTGTTGATTATCTTGGCTGGGAGG
TTTAAAGGGAAGAGAGTTGTTTTTCTGAAACAACTCTCATCCGGGTTGCTTCTGATTACC
GGGCCATTCAAGATTAATGGTGTTCCTCTAAGGCGTGTAAATCAAGCTTATGTGATTGCA
ACTTCCACGAAGGTTGACATTTCCAAGGTCAATGTGGAGAAGTTTGATGACAAGTACTTT
GCCAAGGAAGTACAAAAGAAGAAGAAGGGAGAGGGAGAGTTTTTTGAGGCAGAGAAGGAG
GAAAAGAAGGATCTCCCGCAGGAGAAGAAAGATGACCAGAAGGCTGTTGATGCTTCATTG
ATTGCATCCATTGAGGGAGTTCCCGAGTTGAAGGTATACCTGGCTGCAAGATTTTCTCTC
AAGTCAGGCATGAAACCTCATGAGCTTGTCTTCTAA

Peptide Sequence

PEP ID

VIT_08s0007g06150.t01
PEP Infomation

pep chromosome:12X:8:19956815:19960291:-1 gene:VIT_08s0007g06150 transcript:VIT_08s0007g06150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L6 [Source:UniProtKB/TrEMBL;Acc:F6HLL3]
Sequence

MAPRKTPRTSRNPDLIRGVGKFSRSKMYHKRGLWAIKAKNGGVFPCHEKKPVAPAPLEKL
PKFYPADDVKKPLINKHKAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLIT
GPFKINGVPLRRVNQAYVIATSTKVDISKVNVEKFDDKYFAKEVQKKKKGEGEFFEAEKE
EKKDLPQEKKDDQKAVDASLIASIEGVPELKVYLAARFSLKSGMKPHELVF

Transcript Sequence

Transcript ID

VIT_08s0007g06150.t01
Transcript Infomation

cdna chromosome:12X:8:19956815:19960291:-1 gene:VIT_08s0007g06150 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosomal protein L6 [Source:UniProtKB/TrEMBL;Acc:F6HLL3]
Sequence

TTAACAGTGCCGTGGTTGCTGAGACAGAGGCTTGAGAGTCGCAGCGATGGCACCAAGGAA
AACCCCAAGAACAAGCCGAAACCCGGATCTGATTCGCGGCGTCGGCAAGTTCTCTAGATC
GAAAATGTACCACAAGCGTGGTCTCTGGGCCATCAAGGCTAAAAACGGCGGTGTTTTCCC
TTGCCACGAGAAGAAGCCGGTGGCTCCAGCTCCATTGGAGAAGCTGCCAAAGTTCTACCC
GGCCGATGATGTCAAGAAGCCATTGATCAATAAGCACAAAGCCAAGCCGACCAAACTCAG
GGCAAGTATTACACCTGGAACGGTGTTGATTATCTTGGCTGGGAGGTTTAAAGGGAAGAG
AGTTGTTTTTCTGAAACAACTCTCATCCGGGTTGCTTCTGATTACCGGGCCATTCAAGAT
TAATGGTGTTCCTCTAAGGCGTGTAAATCAAGCTTATGTGATTGCAACTTCCACGAAGGT
TGACATTTCCAAGGTCAATGTGGAGAAGTTTGATGACAAGTACTTTGCCAAGGAAGTACA
AAAGAAGAAGAAGGGAGAGGGAGAGTTTTTTGAGGCAGAGAAGGAGGAAAAGAAGGATCT
CCCGCAGGAGAAGAAAGATGACCAGAAGGCTGTTGATGCTTCATTGATTGCATCCATTGA
GGGAGTTCCCGAGTTGAAGGTATACCTGGCTGCAAGATTTTCTCTCAAGTCAGGCATGAA
ACCTCATGAGCTTGTCTTCTAAAGGAACTTCTCAGTTATTAGGATACATGCTCTGCTCTG
GAATTTGTTTGATTTAGAGTATCAGGGATTGTATTTCAGATTTTGTTCGGCAGAACCCAA
ATTTTGT