Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g05410.t01
CDS Infomation

cds chromosome:12X:8:19354822:19363364:-1 gene:VIT_08s0007g05410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTTCTTCTTCTTCTTCTATATCTTTCACTTCGTTCCTCACTTCCCACTCTAAC
GCTACTGATCTCAACGTTCCGGGTTTCGTGTATGGGAAAGTTCCGGCAAGTTTACGGTTC
AATACTGTGAAAGGGAACAGGGCGTTGTTTGGGAAGAAATTTGAATTGAATTGTTTCCAA
GAGAAAGAGATGGATGTGAGCACTTCGGCGGTGGTTGATGGGATCGCAGACCGCTTAACT
GAAATGGAGGTTAAGGAGCCAAGTATTTCAACCATGTTGATTAATTATGAGAACAAATCC
GATCCTTTTGATGCAGTCAGTCCACCTCTTTACCAAACTGCTACATTCAAGCAGCCTTCA
GCTACTGAAAATGGACCCTATGATTATACTAGAAGTGGCAATCCTACCCGGGATGTTTTG
GAGAGCCTTTTGGCGAGGCTTGACAAAGCAGATCGAGCATTCTGTTTTACTAGTGGAATG
GCGGCTTTGGCTGCTGTTACTCATCTTATTGCACCTGGTGAGGAAATTGTTGCTGGAGAG
GACATATATGGTGGTTCTGATAGATTGCTGTCTCAAGTAACTACAAAAAGAGGAATTGTG
GTGAAACGAGTGGATACAACTAATTTAGAAGAGGTTGCATCTGCTATCGGCCCCATGACA
AAGCTTGTGTGGCTAGAGAGTCCAACCAACCCTCGACTACAAATCTCTGATATTCGAAAA
ATAACAGAGATGGCTCATACACATGGTGCTCTTTTATTGGTTGATAATAGTATTATGTCC
CCTGTATTGTCACAACCATTGGAACTTGGAGCAGACATTGTAATGCACTCGGCTACTAAA
TTTATAGCTGGACATAGTGATGTCATGGCTGGTGTGCTTGCTGTGAAAGGGGAAAGCTTG
GCAAAAGACTTGTACTTTTTGCAAAATGCAGAAGGCTCGGGGTTAGCTCCATTTGACTGT
TGGATATGTTTACGAGGTATTAAGACCATGGCCTTGCGTGTTGAGAAGCAACAGGAGAAT
GCACAAAAGATTGCTGAATTTCTCTCATCCCATCCACGAGTAAAGAAAGTTAACTATGCT
GGTCTTCCTGATCATCCAGGACGTTCTCTACACTATTCTCAGGCAAAGGGAGCTGGGTCT
GTTCTTAGCTTTTTGACGGGCTCACTGGAATTCTCAAAGTACATTGTTGAGACTACCAAG
TACTTCAGCATAACTGTTAGTTTTGGGAGTGTGAAGTCCCTCATAAGTATGCCTTGCTTT
ATGTCCCATGCAAGCATACCAGCAGCAGTGCGGGAGGCTAGAGGCCTCACTGAAGATCTT
GTTCGCATATCTGTGGGAATTGAGGACATCAACGATCTCATTGCTGATCTAGATTATGCA
CTGAGAACTGGGCCTCAATAG

Peptide Sequence

PEP ID

VIT_08s0007g05410.t01
PEP Infomation

pep chromosome:12X:8:19354822:19363364:-1 gene:VIT_08s0007g05410 transcript:VIT_08s0007g05410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSSSSSISFTSFLTSHSNATDLNVPGFVYGKVPASLRFNTVKGNRALFGKKFELNCFQ
EKEMDVSTSAVVDGIADRLTEMEVKEPSISTMLINYENKSDPFDAVSPPLYQTATFKQPS
ATENGPYDYTRSGNPTRDVLESLLARLDKADRAFCFTSGMAALAAVTHLIAPGEEIVAGE
DIYGGSDRLLSQVTTKRGIVVKRVDTTNLEEVASAIGPMTKLVWLESPTNPRLQISDIRK
ITEMAHTHGALLLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVLAVKGESL
AKDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQENAQKIAEFLSSHPRVKKVNYA
GLPDHPGRSLHYSQAKGAGSVLSFLTGSLEFSKYIVETTKYFSITVSFGSVKSLISMPCF
MSHASIPAAVREARGLTEDLVRISVGIEDINDLIADLDYALRTGPQ

Transcript Sequence

Transcript ID

VIT_08s0007g05410.t01
Transcript Infomation

cdna chromosome:12X:8:19354822:19363364:-1 gene:VIT_08s0007g05410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTAAGAGACCGAAGGGAAAGTTAAAATTCAATATTTCTAAGCTCGTCAATGGCTTCTTCT
TCTTCTTCTTCTATATCTTTCACTTCGTTCCTCACTTCCCACTCTAACGCTACTGATCTC
AACGTTCCGGGTTTCGTGTATGGGAAAGTTCCGGCAAGTTTACGGTTCAATACTGTGAAA
GGGAACAGGGCGTTGTTTGGGAAGAAATTTGAATTGAATTGTTTCCAAGAGAAAGAGATG
GATGTGAGCACTTCGGCGGTGGTTGATGGGATCGCAGACCGCTTAACTGAAATGGAGGTT
AAGGAGCCAAGTATTTCAACCATGTTGATTAATTATGAGAACAAATCCGATCCTTTTGAT
GCAGTCAGTCCACCTCTTTACCAAACTGCTACATTCAAGCAGCCTTCAGCTACTGAAAAT
GGACCCTATGATTATACTAGAAGTGGCAATCCTACCCGGGATGTTTTGGAGAGCCTTTTG
GCGAGGCTTGACAAAGCAGATCGAGCATTCTGTTTTACTAGTGGAATGGCGGCTTTGGCT
GCTGTTACTCATCTTATTGCACCTGGTGAGGAAATTGTTGCTGGAGAGGACATATATGGT
GGTTCTGATAGATTGCTGTCTCAAGTAACTACAAAAAGAGGAATTGTGGTGAAACGAGTG
GATACAACTAATTTAGAAGAGGTTGCATCTGCTATCGGCCCCATGACAAAGCTTGTGTGG
CTAGAGAGTCCAACCAACCCTCGACTACAAATCTCTGATATTCGAAAAATAACAGAGATG
GCTCATACACATGGTGCTCTTTTATTGGTTGATAATAGTATTATGTCCCCTGTATTGTCA
CAACCATTGGAACTTGGAGCAGACATTGTAATGCACTCGGCTACTAAATTTATAGCTGGA
CATAGTGATGTCATGGCTGGTGTGCTTGCTGTGAAAGGGGAAAGCTTGGCAAAAGACTTG
TACTTTTTGCAAAATGCAGAAGGCTCGGGGTTAGCTCCATTTGACTGTTGGATATGTTTA
CGAGGTATTAAGACCATGGCCTTGCGTGTTGAGAAGCAACAGGAGAATGCACAAAAGATT
GCTGAATTTCTCTCATCCCATCCACGAGTAAAGAAAGTTAACTATGCTGGTCTTCCTGAT
CATCCAGGACGTTCTCTACACTATTCTCAGGCAAAGGGAGCTGGGTCTGTTCTTAGCTTT
TTGACGGGCTCACTGGAATTCTCAAAGTACATTGTTGAGACTACCAAGTACTTCAGCATA
ACTGTTAGTTTTGGGAGTGTGAAGTCCCTCATAAGTATGCCTTGCTTTATGTCCCATGCA
AGCATACCAGCAGCAGTGCGGGAGGCTAGAGGCCTCACTGAAGATCTTGTTCGCATATCT
GTGGGAATTGAGGACATCAACGATCTCATTGCTGATCTAGATTATGCACTGAGAACTGGG
CCTCAATAGTAGCTTCATTCTTAATGCACTCATCTTAACATAATTATGTTTTATGTCGTT
GTTTTTGGTGTATGGTCAATTTTTATTCTGTAACGTTTGGGAGTTCGCAATCCATTTTGA
TAGACAAAAGGAAATAACATATTCAC