Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g04850.t01
CDS Infomation

cds chromosome:12X:8:18797403:18803660:-1 gene:VIT_08s0007g04850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A5BED9]
Sequence

ATGTTCAACAAAATTATAAAGCGCGGCCATCGGAAGCCGTCCAAGGCCGATGCGATAGAT
TCGGGATTGTATGGATTTGGACCGGCTGGGAATCGCAATTCTGGGATGGTATCGACGTCG
AATGTGGTTGTAAACCATGCGTCTCGGACTGCCCCAGCTCTATCAGTGGTCAATTCGGCG
CCACAGCCCGGTGGGGCTGTGATTGATCCAACGGCTCTGCCTTCCGGCAATATTGATCCC
CTTCCTCCGTTTCGGGATGTTGCTGTGTCGGATCGACAACTTTTGTTTCTTAGGAAACTA
CAAATTTGCTGTTTCCAGTTTGATTTCACGGACACTTTGAAATCAGTACGGGAAAAGGAA
ATTAAGAGGCAGACCCTATTGGAGCTTATTGACTTTATACAATCCGGTTCTGGGAAAATT
ACAGAGAACAATCAAGAAGAGATGATTAAGATGATTTCTGTAAATATTTTCCGATGTTTT
CCTCCAGCTCCCCATGAAAATTCCGGCTCAGAAATGCTGGAGATAGAAGAGGAGCCCTAT
GCGGAACCAGCGTGGCCTCATCTTCATCTTGTGTATGAGCTACTTTTAAGGTATGTTGTT
TCATCGGACACCGACACGAAGATTGCCAAGCGGTATATTGATCATTCGTTTGTTCTAAAA
CTGCTTGATTTGTTTGATGCTGATGACCCACGAGAGCGGGAGTATTTGAAAACCATATTA
CATCGCATATATGGGAAGTTCATGGTGCACCGGCCCTTTATTAGAAAGGCCATTAATAAT
ATATTTTATCGGTTTATATATGAGACAGAACGGCACAGTGGTATTGGTGAGCTTCTGGAG
ATTCTTGGGAGTATAATAAATGGGTTTGCGTTGCCCATGAAAGAGGAGCATAAGTTGTTC
CTTGTTCGGGCTCTTATACCATTGCATAAGCCTAAGGCACTTGCACTGTATCATCAGCAG
CTGTCTTACTGCATCACTCAATTTGTTGAGAAAGATTACAAGTTAGCAGATACGGTTATT
AGGGGTTTGCTAAAATATTGGCCTATCACTAATTGTACGAAGGAACTTCTTTTCCTTGGG
GAATTAGAAGAAGTGTTGGAGGCAACACAGTCTGCTGAATTTCAACGCTGCATGGTTCCT
CTTTTCAGACAGATAGGCCGCTGCCTGAATAGCTCTCAATCTCAGGTTGCCGAAAGAGCC
TTCTTTTTGTGGAAAAATGACCACATTGTGAGCTTAATTGCCCAGAATCGCAATGTCATT
CTCCCAATCATTTTTGAGCCATTGGAAAAGAACGTTCGGTCTCATTGGAACCAGGCAGTC
CATGGTCTCACCATTAATATTCGGAAAATGTTCTTGGAAATGGATTTTGATTTGTTTGAA
GAATGCCAGAAGCAGCATGAAGAGATGGAGGCCAGGGCGAGAGAGTTGGAAGAGCAACGG
GAATTGACATGGAAGAGACTGGCAGAAGCAGCAGAACAAAGAAAAGGAGAGGATGGGATT
ACAGTCTAA

Peptide Sequence

PEP ID

VIT_08s0007g04850.t01
PEP Infomation

pep chromosome:12X:8:18797403:18803660:-1 gene:VIT_08s0007g04850 transcript:VIT_08s0007g04850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A5BED9]
Sequence

MFNKIIKRGHRKPSKADAIDSGLYGFGPAGNRNSGMVSTSNVVVNHASRTAPALSVVNSA
PQPGGAVIDPTALPSGNIDPLPPFRDVAVSDRQLLFLRKLQICCFQFDFTDTLKSVREKE
IKRQTLLELIDFIQSGSGKITENNQEEMIKMISVNIFRCFPPAPHENSGSEMLEIEEEPY
AEPAWPHLHLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFDADDPREREYLKTIL
HRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLF
LVRALIPLHKPKALALYHQQLSYCITQFVEKDYKLADTVIRGLLKYWPITNCTKELLFLG
ELEEVLEATQSAEFQRCMVPLFRQIGRCLNSSQSQVAERAFFLWKNDHIVSLIAQNRNVI
LPIIFEPLEKNVRSHWNQAVHGLTINIRKMFLEMDFDLFEECQKQHEEMEARARELEEQR
ELTWKRLAEAAEQRKGEDGITV

Transcript Sequence

Transcript ID

VIT_08s0007g04850.t01
Transcript Infomation

cdna chromosome:12X:8:18797403:18803660:-1 gene:VIT_08s0007g04850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A5BED9]
Sequence

AACTCCTCCTCCAATTGCAGAAATCACTCTCGATCACTTCGCCGGTTTCCGGCGACATGC
TACAACGCTCACCTTCGCCTTTGCAGTATATGAACGGCTCAACATATCTTGAATTCAGAT
TGCGATTACGGTACCTTTCTGCCCTGATTCGCATCCCAGATCCGTTTTCTTTTGATTTAT
GAAAAACCATGTGAAGTGATTGTAACCGATGAAAATATAGGATTGCTGTTGCTTTCATGA
TCGGCTTTCACTTGTAACCATCGTTCGTTTTGTTGCTCATTCATGATTTGATCCATATAT
CTCCGTAGTTCACAGTTTTGGGGTTAGGGGTTACTAATTGAGATGTTCAACAAAATTATA
AAGCGCGGCCATCGGAAGCCGTCCAAGGCCGATGCGATAGATTCGGGATTGTATGGATTT
GGACCGGCTGGGAATCGCAATTCTGGGATGGTATCGACGTCGAATGTGGTTGTAAACCAT
GCGTCTCGGACTGCCCCAGCTCTATCAGTGGTCAATTCGGCGCCACAGCCCGGTGGGGCT
GTGATTGATCCAACGGCTCTGCCTTCCGGCAATATTGATCCCCTTCCTCCGTTTCGGGAT
GTTGCTGTGTCGGATCGACAACTTTTGTTTCTTAGGAAACTACAAATTTGCTGTTTCCAG
TTTGATTTCACGGACACTTTGAAATCAGTACGGGAAAAGGAAATTAAGAGGCAGACCCTA
TTGGAGCTTATTGACTTTATACAATCCGGTTCTGGGAAAATTACAGAGAACAATCAAGAA
GAGATGATTAAGATGATTTCTGTAAATATTTTCCGATGTTTTCCTCCAGCTCCCCATGAA
AATTCCGGCTCAGAAATGCTGGAGATAGAAGAGGAGCCCTATGCGGAACCAGCGTGGCCT
CATCTTCATCTTGTGTATGAGCTACTTTTAAGGTATGTTGTTTCATCGGACACCGACACG
AAGATTGCCAAGCGGTATATTGATCATTCGTTTGTTCTAAAACTGCTTGATTTGTTTGAT
GCTGATGACCCACGAGAGCGGGAGTATTTGAAAACCATATTACATCGCATATATGGGAAG
TTCATGGTGCACCGGCCCTTTATTAGAAAGGCCATTAATAATATATTTTATCGGTTTATA
TATGAGACAGAACGGCACAGTGGTATTGGTGAGCTTCTGGAGATTCTTGGGAGTATAATA
AATGGGTTTGCGTTGCCCATGAAAGAGGAGCATAAGTTGTTCCTTGTTCGGGCTCTTATA
CCATTGCATAAGCCTAAGGCACTTGCACTGTATCATCAGCAGCTGTCTTACTGCATCACT
CAATTTGTTGAGAAAGATTACAAGTTAGCAGATACGGTTATTAGGGGTTTGCTAAAATAT
TGGCCTATCACTAATTGTACGAAGGAACTTCTTTTCCTTGGGGAATTAGAAGAAGTGTTG
GAGGCAACACAGTCTGCTGAATTTCAACGCTGCATGGTTCCTCTTTTCAGACAGATAGGC
CGCTGCCTGAATAGCTCTCAATCTCAGGTTGCCGAAAGAGCCTTCTTTTTGTGGAAAAAT
GACCACATTGTGAGCTTAATTGCCCAGAATCGCAATGTCATTCTCCCAATCATTTTTGAG
CCATTGGAAAAGAACGTTCGGTCTCATTGGAACCAGGCAGTCCATGGTCTCACCATTAAT
ATTCGGAAAATGTTCTTGGAAATGGATTTTGATTTGTTTGAAGAATGCCAGAAGCAGCAT
GAAGAGATGGAGGCCAGGGCGAGAGAGTTGGAAGAGCAACGGGAATTGACATGGAAGAGA
CTGGCAGAAGCAGCAGAACAAAGAAAAGGAGAGGATGGGATTACAGTCTAACAGATTTTT
TGTGGTGGAAGGCACCACTAAAAAAAAAAGAATTGATGATGGTAGATGGGACGGAGAATG
CTCCTTTCAGTCCTTTGTCCATTTTGGTGCTATTGTGTTAATTTTTTTTTTCCTCAATAT
ATATTATATAATTTTTTTTTAACCTTCTCTTATTTTTTATTGTTTATTAAATATCATTCC
GATCCTACCAATGAAAATATCAGGAGAGCAGCGAGCTTTGTAATTTAGAATGTATGAAAA
ATTGTGAGTAATGCGCTGCTGCCGAGGAAGAATGATTCTGT