Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_08s0007g04820.t01
CDS Infomation	cds chromosome:12X:8:18784751:18787240:1 gene:VIT_08s0007g04820 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:E7BTN4]
Sequence	ATGTTAGATGTAGATCATTCTCGGAGAAAACCAACCCAGACTCATCCTTCTGCATCAGCC ATGCTTCGCAGGACCTGCATTGTCCTAATCTCTCTTCTAAGCTCACTTTCTGCACTTGCT ACGCCAATGCAGAACCTCACCCTCCTCGGTCAACATCCAGACCCCGAAGCTGTTGTCCAA GAAGTTCAAAGAAGAGTAAATGTGTCGGTGTCAAGAAGACAAACACTAGAAGTGTCCCAA AGCGACCAGTCCTCCTCATGCGTCACGGGAAACCCCATAGACGACTGCTGGAGGTGCGAC CCCAACTGGGAAGCCGACCGCCAACGCCTCGCCGACTGCGCCATTGGATTCGGCCAGTAC GCCCTCGGCGGCAAAGGCGGTCAGATCTACGTCGTCACCGACTCCTCCGACCACGACGCC GTCACCCCTCGCCCCGGCACACTCCGCTACGCCGTCATCCAGTCCGACCCTCTCTGGATC GTCTTTGCCACCAACATGCTCATCAAACTCTCCCAGGAGCTCATCTTCAACAGCTACAAA ACCCTAGACGGCCGTGGCGCCAACGTCCACATCGTCGGAGGCGGTTGCATCACTCTCCAG TACATCAGTAACGTCATCATCCACAACATCCACATCCACCATTGCGTGCAGTCGGGCGAG GCTAACGTGCGGTCGAGCCCCACACACTACGGGTGGCGCACACTGTCGGACGGTGATGGA ATATCGATATTCGGATCACGAGACATATGGATCGACCACTGTTCGTTGTCCCATTGTAAA GACGGTTTGATCGATGCAGTGATGGGTTCCACAGGCATAACAATATCCAACAACTTTTTC TCGCATCACGATGAGGTGATGCTGTTAGGTCACAGCGATTCGTATGTGCCCGATTCAGGG ATGCAGGTCACTATAGCATTTAATCACTTTGGTGAGCAGCTGGTGCAGCGGATGCCTAGG TGCAGACGCGGCTATATACACGTGGTCAACAATGATTTTACTCGTTGGGAGATGTATGCT ATTGGGGGTAGCGGTAGCCCCACCATCAACAGCCAGGGGAATCGCTATACCGCGCCTTCC AATCGCAACGCCAAGGAGGTGACGAAGCGCGTGGATACGGATGAGAAGAAGTGGAGGGAC TGGAATTGGAGGAGCGAGGGGGACATATTGGTGAACGGAGCCTTCTTCATTGCATCAGGT GAAACCGTTGAGGTTCTCTACGAAAAAGCCTACAGCGTGGAGCCCAAATCTGCTGCCCTC ATTGATCAACTTACCACTAACGCCGGTGTCCTCGGTGGCAGCGGCAACAACCTTGGAACG TGGAGGACAGAACGAAGTGGTGGGGGATATGGTTTTGGTGATGACTACTCCGAGAATATG TTGAGCGGCTCACCATCCTCCTTTGCCCTTTCTTCCACTCTCCTTCCTCCTTTATTTCTC TTATCTTCCTTTCTACTCTTGTACCTCTAA

Peptide Sequence

PEP ID	VIT_08s0007g04820.t01
PEP Infomation	pep chromosome:12X:8:18784751:18787240:1 gene:VIT_08s0007g04820 transcript:VIT_08s0007g04820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:E7BTN4]
Sequence	MLDVDHSRRKPTQTHPSASAMLRRTCIVLISLLSSLSALATPMQNLTLLGQHPDPEAVVQ EVQRRVNVSVSRRQTLEVSQSDQSSSCVTGNPIDDCWRCDPNWEADRQRLADCAIGFGQY ALGGKGGQIYVVTDSSDHDAVTPRPGTLRYAVIQSDPLWIVFATNMLIKLSQELIFNSYK TLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCVQSGEANVRSSPTHYGWRTLSDGDG ISIFGSRDIWIDHCSLSHCKDGLIDAVMGSTGITISNNFFSHHDEVMLLGHSDSYVPDSG MQVTIAFNHFGEQLVQRMPRCRRGYIHVVNNDFTRWEMYAIGGSGSPTINSQGNRYTAPS NRNAKEVTKRVDTDEKKWRDWNWRSEGDILVNGAFFIASGETVEVLYEKAYSVEPKSAAL IDQLTTNAGVLGGSGNNLGTWRTERSGGGYGFGDDYSENMLSGSPSSFALSSTLLPPLFL LSSFLLLYL

Transcript Sequence

Transcript ID	VIT_08s0007g04820.t01
Transcript Infomation	cdna chromosome:12X:8:18784751:18787240:1 gene:VIT_08s0007g04820 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:E7BTN4]
Sequence	ATGTTAGATGTAGATCATTCTCGGAGAAAACCAACCCAGACTCATCCTTCTGCATCAGCC ATGCTTCGCAGGACCTGCATTGTCCTAATCTCTCTTCTAAGCTCACTTTCTGCACTTGCT ACGCCAATGCAGAACCTCACCCTCCTCGGTCAACATCCAGACCCCGAAGCTGTTGTCCAA GAAGTTCAAAGAAGAGTAAATGTGTCGGTGTCAAGAAGACAAACACTAGAAGTGTCCCAA AGCGACCAGTCCTCCTCATGCGTCACGGGAAACCCCATAGACGACTGCTGGAGGTGCGAC CCCAACTGGGAAGCCGACCGCCAACGCCTCGCCGACTGCGCCATTGGATTCGGCCAGTAC GCCCTCGGCGGCAAAGGCGGTCAGATCTACGTCGTCACCGACTCCTCCGACCACGACGCC GTCACCCCTCGCCCCGGCACACTCCGCTACGCCGTCATCCAGTCCGACCCTCTCTGGATC GTCTTTGCCACCAACATGCTCATCAAACTCTCCCAGGAGCTCATCTTCAACAGCTACAAA ACCCTAGACGGCCGTGGCGCCAACGTCCACATCGTCGGAGGCGGTTGCATCACTCTCCAG TACATCAGTAACGTCATCATCCACAACATCCACATCCACCATTGCGTGCAGTCGGGCGAG GCTAACGTGCGGTCGAGCCCCACACACTACGGGTGGCGCACACTGTCGGACGGTGATGGA ATATCGATATTCGGATCACGAGACATATGGATCGACCACTGTTCGTTGTCCCATTGTAAA GACGGTTTGATCGATGCAGTGATGGGTTCCACAGGCATAACAATATCCAACAACTTTTTC TCGCATCACGATGAGGTGATGCTGTTAGGTCACAGCGATTCGTATGTGCCCGATTCAGGG ATGCAGGTCACTATAGCATTTAATCACTTTGGTGAGCAGCTGGTGCAGCGGATGCCTAGG TGCAGACGCGGCTATATACACGTGGTCAACAATGATTTTACTCGTTGGGAGATGTATGCT ATTGGGGGTAGCGGTAGCCCCACCATCAACAGCCAGGGGAATCGCTATACCGCGCCTTCC AATCGCAACGCCAAGGAGGTGACGAAGCGCGTGGATACGGATGAGAAGAAGTGGAGGGAC TGGAATTGGAGGAGCGAGGGGGACATATTGGTGAACGGAGCCTTCTTCATTGCATCAGGT GAAACCGTTGAGGTTCTCTACGAAAAAGCCTACAGCGTGGAGCCCAAATCTGCTGCCCTC ATTGATCAACTTACCACTAACGCCGGTGTCCTCGGTGGCAGCGGCAACAACCTTGGAACG TGGAGGACAGAACGAAGTGGTGGGGGATATGGTTTTGGTGATGACTACTCCGAGAATATG TTGAGCGGCTCACCATCCTCCTTTGCCCTTTCTTCCACTCTCCTTCCTCCTTTATTTCTC TTATCTTCCTTTCTACTCTTGTACCTCTAACCCCATCTTCTTGTGATAATGAATCATTTT TCTGTACTGTTATTTGCATTGACTCTTTTAAGTCTTAACTATGCATGTCATACCAA