Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g04680.t01
CDS Infomation

cds chromosome:12X:8:18624359:18625680:1 gene:VIT_08s0007g04680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6HKD3]
Sequence

ATGGCATTGCCTTTGCGAGCCCTCTTGTCATCATTGCTGCCGCTGCTTTTGCTCCTGCTG
TCTCATGATGTCCATGCCAATGGATGGACAGGGAATGCACGTCATGCATTGCTTTCCAAG
CACCATAGACCAAAGTTCAAGCCTGGCCCTTGGCATAATGCTCATGCCACCTTTTATGGA
GGAGCCGATGCCTCACAAACAATGGGGGGAGCTTGTGGCTATGGAGACCTGCATAAGCAA
GGGTATGGGGTTCAAACCGCAGCGTTGAGCACGGTTCTCTTCAATGGTGGGCAGGCATGT
GGGGCTTGTTTCGAAATCAAATGTGTGGATGATCCACAGGGGTGCAAGCGAGGGCAGGCA
TCACTCATGGTTACAGCCACCAACCTGTGCCCTCCAAGTAGCAATGGAGGATGGTGTAAT
CCACCTCGTGAACACTTTGATCTCTCCCAGCCTGCATTTCTTCAGATTGCCGAGTACAAG
GCTGGCATTGTTCCCGTTCAGTATCGCAGGGTCCCATGCAAGAAGAAAGGAGGGATTCGA
TTCACAATATCTGGGAATCCTTACTTCAACCTTGTGTTTATATGGAATGTTGGAGGAGCT
GGAGATATCACGAGTGTGCAGGTGAAGGGCGATCGCAAACTGAAATGGACAACACTCAAG
CGTAATTGGGGTCAGAACTGGGAGACTGACGCCATGTTGGTTGGGGAATCACTCACCTTC
CGAGTCAGAGTAAGTGATGGTAGATACTCTACCTCCTGGCATATCGCCCCAAAGAACTGG
CAGTTCGGCCAGACCTTTGAAGGCAAGAACTTCAAGTAG

Peptide Sequence

PEP ID

VIT_08s0007g04680.t01
PEP Infomation

pep chromosome:12X:8:18624359:18625680:1 gene:VIT_08s0007g04680 transcript:VIT_08s0007g04680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6HKD3]
Sequence

MALPLRALLSSLLPLLLLLLSHDVHANGWTGNARHALLSKHHRPKFKPGPWHNAHATFYG
GADASQTMGGACGYGDLHKQGYGVQTAALSTVLFNGGQACGACFEIKCVDDPQGCKRGQA
SLMVTATNLCPPSSNGGWCNPPREHFDLSQPAFLQIAEYKAGIVPVQYRRVPCKKKGGIR
FTISGNPYFNLVFIWNVGGAGDITSVQVKGDRKLKWTTLKRNWGQNWETDAMLVGESLTF
RVRVSDGRYSTSWHIAPKNWQFGQTFEGKNFK

Transcript Sequence

Transcript ID

VIT_08s0007g04680.t01
Transcript Infomation

cdna chromosome:12X:8:18624359:18625680:1 gene:VIT_08s0007g04680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6HKD3]
Sequence

AAAAACTACAAGTCCCTTGGACTCTCAAAGGCATTGCCAAACAAAGTTTTTAGGTACCAT
GGCATTGCCTTTGCGAGCCCTCTTGTCATCATTGCTGCCGCTGCTTTTGCTCCTGCTGTC
TCATGATGTCCATGCCAATGGATGGACAGGGAATGCACGTCATGCATTGCTTTCCAAGCA
CCATAGACCAAAGTTCAAGCCTGGCCCTTGGCATAATGCTCATGCCACCTTTTATGGAGG
AGCCGATGCCTCACAAACAATGGGGGGAGCTTGTGGCTATGGAGACCTGCATAAGCAAGG
GTATGGGGTTCAAACCGCAGCGTTGAGCACGGTTCTCTTCAATGGTGGGCAGGCATGTGG
GGCTTGTTTCGAAATCAAATGTGTGGATGATCCACAGGGGTGCAAGCGAGGGCAGGCATC
ACTCATGGTTACAGCCACCAACCTGTGCCCTCCAAGTAGCAATGGAGGATGGTGTAATCC
ACCTCGTGAACACTTTGATCTCTCCCAGCCTGCATTTCTTCAGATTGCCGAGTACAAGGC
TGGCATTGTTCCCGTTCAGTATCGCAGGGTCCCATGCAAGAAGAAAGGAGGGATTCGATT
CACAATATCTGGGAATCCTTACTTCAACCTTGTGTTTATATGGAATGTTGGAGGAGCTGG
AGATATCACGAGTGTGCAGGTGAAGGGCGATCGCAAACTGAAATGGACAACACTCAAGCG
TAATTGGGGTCAGAACTGGGAGACTGACGCCATGTTGGTTGGGGAATCACTCACCTTCCG
AGTCAGAGTAAGTGATGGTAGATACTCTACCTCCTGGCATATCGCCCCAAAGAACTGGCA
GTTCGGCCAGACCTTTGAAGGCAAGAACTTCAAGTAGAGACCTTTCCATCTGAATATCCT
TCCTGTTCTGCCAGGCACAAAGGATCTCTTATGTTTGCTGGGCCATGCATATCATGCGTT
TTCTGTAAAAAAATTTAAGATAGCAGTCCAGGCACCTTAGAGGATAGACACATTGACCGA
ATTCTGAGCTAGTCTCGGAAACGCTGTGTTGTTGGCTTGTTGCTTTTAAGGGTCTGTACG
GGCAACCAAAGTAATGGATTTGTTATCAAATTCTCAAGTTCA