Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g04390.t01
CDS Infomation

cds chromosome:12X:8:18335905:18342508:-1 gene:VIT_08s0007g04390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGTCGTCTATTTCAATTTTGGCCCTGATCTTGGCCTTCGCCGCCATTCTACTGACG
GCGGCCGTAGTCCACTGTGGTTCTCCGGCCAGCCTTCTCACTCTGGAGAGGGCTTTTCCG
GTGAACCAGCGGGTCGAGCTCGAGGTACTCAGGGCTCGTGATCAAGCCAGGCACGGACGA
TTATTGCGAGGTGTAGTTGGGGGTGTTGTTGATTTCACCGTCTATGGTACCTCCGATCCG
TACCTGGTTGGGCTTTATTTTACAAAAGTGAAACTGGGCTCTCCTCCAAGGGAATTCAAT
GTGCAGATTGATACTGGAAGTGATATATTGTGGGTTACCTGCAATTCGTGCAATGATTGC
CCCAGAACCAGCGGACTCGGAATTGAGCTCAGTTTTTTTGATCCTTCCAGCTCATCAACC
ACTTCTCTAGTCTCCTGTTCACACCCAATATGTACTTCCCTAGTTCAAACCACTGCAGCT
GAGTGCTCCCCTCAGAGTAATCAGTGCAGTTACTCATTCCACTATGGGGATGGAAGTGGG
ACAACAGGTTATTATGTATCCGACATGTTGTATTTTGACACAGTTTTGGGGGACTCTTTG
ATTGCTAACTCCTCAGCTTCCATTGTATTTGGGTGTAGCACCTACCAATCCGGAGACTTG
ACTAAAGTGGATAAGGCAATTGATGGAATTTTTGGGTTTGGCCAACAGGATCTATCTGTT
GTGTCACAATTGTCATCACTAGGGATAACACCAAAGGTGTTCTCCCATTGCTTGAAAGGA
GAAGGAGATGGTGGGGGTAAGCTGGTCCTTGGTGAGATTTTGGAGCCAAATATAATTTAT
AGTCCACTTGTGCCATCACAGTCTCATTATAATCTAAACCTGCAGAGCATTTCTGTCAAT
GGGCAACTGCTGCCAATTGATCCGGCTGTGTTTGCAACATCCAACAACCAAGGAACAATT
GTTGATTCTGGAACAACTTTGACATACCTAGTGGAAACCGCTTATGATCCTTTTGTAAGC
GCTATAACTGCAACTGTTTCATCATCTACGACTCCTGTCCTTTCAAAAGGAAACCAGTGT
TATCTAGTCTCCACCAGTGTAGATGAAATATTTCCTCCAGTCAGTTTAAACTTTGCTGGC
GGTGCATCCATGGTTTTAAAACCAGGAGAATACCTTATGCATCTTGGTTTTTCTGATGGT
GCTGCAATGTGGTGCATTGGATTTCAGAAAGTTGCAGAACCAGGGATAACAATTTTAGGA
GATCTTGTTCTAAAGGATAAAATCTTTGTTTATGACCTTGCTCATCAACGGATTGGATGG
GCTAACTATGACTGTTCATTGTCTGTAAATGTCTCTGTAACATCTGGTAAGGATGAATTC
ATAAATTCAGGACAGCTGAGTATGAGCAGCTCGTCACAGAACATGCTCTTTGAGCCGATA
CCTAGAAGCATTAAGGCTCTCCTTATCCACATTTTAGTGTTCAGTGGGTTCCTATTCTTT
GTAACTTAA

Peptide Sequence

PEP ID

VIT_08s0007g04390.t01
PEP Infomation

pep chromosome:12X:8:18335905:18342508:-1 gene:VIT_08s0007g04390 transcript:VIT_08s0007g04390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPSSISILALILAFAAILLTAAVVHCGSPASLLTLERAFPVNQRVELEVLRARDQARHGR
LLRGVVGGVVDFTVYGTSDPYLVGLYFTKVKLGSPPREFNVQIDTGSDILWVTCNSCNDC
PRTSGLGIELSFFDPSSSSTTSLVSCSHPICTSLVQTTAAECSPQSNQCSYSFHYGDGSG
TTGYYVSDMLYFDTVLGDSLIANSSASIVFGCSTYQSGDLTKVDKAIDGIFGFGQQDLSV
VSQLSSLGITPKVFSHCLKGEGDGGGKLVLGEILEPNIIYSPLVPSQSHYNLNLQSISVN
GQLLPIDPAVFATSNNQGTIVDSGTTLTYLVETAYDPFVSAITATVSSSTTPVLSKGNQC
YLVSTSVDEIFPPVSLNFAGGASMVLKPGEYLMHLGFSDGAAMWCIGFQKVAEPGITILG
DLVLKDKIFVYDLAHQRIGWANYDCSLSVNVSVTSGKDEFINSGQLSMSSSSQNMLFEPI
PRSIKALLIHILVFSGFLFFVT

Transcript Sequence

Transcript ID

VIT_08s0007g04390.t01
Transcript Infomation

cdna chromosome:12X:8:18335905:18342508:-1 gene:VIT_08s0007g04390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACACTGGTCTCCTTTCTCTCTCTAAAGCCTCCCTTCATTTTCTCTCTCTCTCTCTAA
AAATGCTGAAAAGCAATCACATCGATCTTTGCTACTGAACCACAGAACCAATTCCAATGC
CGTCGTCTATTTCAATTTTGGCCCTGATCTTGGCCTTCGCCGCCATTCTACTGACGGCGG
CCGTAGTCCACTGTGGTTCTCCGGCCAGCCTTCTCACTCTGGAGAGGGCTTTTCCGGTGA
ACCAGCGGGTCGAGCTCGAGGTACTCAGGGCTCGTGATCAAGCCAGGCACGGACGATTAT
TGCGAGGTGTAGTTGGGGGTGTTGTTGATTTCACCGTCTATGGTACCTCCGATCCGTACC
TGGTTGGGCTTTATTTTACAAAAGTGAAACTGGGCTCTCCTCCAAGGGAATTCAATGTGC
AGATTGATACTGGAAGTGATATATTGTGGGTTACCTGCAATTCGTGCAATGATTGCCCCA
GAACCAGCGGACTCGGAATTGAGCTCAGTTTTTTTGATCCTTCCAGCTCATCAACCACTT
CTCTAGTCTCCTGTTCACACCCAATATGTACTTCCCTAGTTCAAACCACTGCAGCTGAGT
GCTCCCCTCAGAGTAATCAGTGCAGTTACTCATTCCACTATGGGGATGGAAGTGGGACAA
CAGGTTATTATGTATCCGACATGTTGTATTTTGACACAGTTTTGGGGGACTCTTTGATTG
CTAACTCCTCAGCTTCCATTGTATTTGGGTGTAGCACCTACCAATCCGGAGACTTGACTA
AAGTGGATAAGGCAATTGATGGAATTTTTGGGTTTGGCCAACAGGATCTATCTGTTGTGT
CACAATTGTCATCACTAGGGATAACACCAAAGGTGTTCTCCCATTGCTTGAAAGGAGAAG
GAGATGGTGGGGGTAAGCTGGTCCTTGGTGAGATTTTGGAGCCAAATATAATTTATAGTC
CACTTGTGCCATCACAGTCTCATTATAATCTAAACCTGCAGAGCATTTCTGTCAATGGGC
AACTGCTGCCAATTGATCCGGCTGTGTTTGCAACATCCAACAACCAAGGAACAATTGTTG
ATTCTGGAACAACTTTGACATACCTAGTGGAAACCGCTTATGATCCTTTTGTAAGCGCTA
TAACTGCAACTGTTTCATCATCTACGACTCCTGTCCTTTCAAAAGGAAACCAGTGTTATC
TAGTCTCCACCAGTGTAGATGAAATATTTCCTCCAGTCAGTTTAAACTTTGCTGGCGGTG
CATCCATGGTTTTAAAACCAGGAGAATACCTTATGCATCTTGGTTTTTCTGATGGTGCTG
CAATGTGGTGCATTGGATTTCAGAAAGTTGCAGAACCAGGGATAACAATTTTAGGAGATC
TTGTTCTAAAGGATAAAATCTTTGTTTATGACCTTGCTCATCAACGGATTGGATGGGCTA
ACTATGACTGTTCATTGTCTGTAAATGTCTCTGTAACATCTGGTAAGGATGAATTCATAA
ATTCAGGACAGCTGAGTATGAGCAGCTCGTCACAGAACATGCTCTTTGAGCCGATACCTA
GAAGCATTAAGGCTCTCCTTATCCACATTTTAGTGTTCAGTGGGTTCCTATTCTTTGTAA
CTTAAGCCTCAGGTTTGAAATCCCATTCCTTGTTCAATGTGTTTTGGCCTTGGTCAATTC
TTATTTATGGTGGTTGGCCAACAGTTCCCTTATTATTTGGATTGCTAGCAGTAGCTGGTT
CTTGTCCTATATAATTCAAATTCTGATTGCTAGCAAATGTGGTGTTGTGTACCCTCTTCT
AACCAAAATTTCCTCCTCCTAGAGAGTACTGCATCTTGAGCAATGCTGCCTTGTAAATTG
TATCTACACCACTTCTTGAGGGTTGAAGAATTGAACTATGGCATCATTGGTGGTACAAAC
CACAAAGCAGCTATATCAATTGTTGTTGAGTTAGCAAGAGATGTATAGTGCCCAAGTACA
GCACTCCGATATCTGTAAGGTCTATTAGGCAATTGCAAAAAAAGATTCGTATTTGTTACC
TTGTTTTGTTCTTTCTTTTTTCCCACTGAACTATGTAATTCCCTTGCTTCACTGCCATCC
CATTGTTGCTTCCGAGACAGCATTGATTGATGTGAATGATCATTTATATATTAGTGCTAT
ATTATCATAC