Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g04240.t01
CDS Infomation

cds chromosome:12X:8:18215451:18217217:-1 gene:VIT_08s0007g04240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCGGGACAAGAAAAAGAAGAACGGGCCGAGCCAGCCTTGAGGTTGGCCGGCTCG
GAGAAGAGGGAGGCCGAAAGGGAGAGAGAAGAAGGAGCAAAATTGGTTTCTGATCGACAG
AAACAGGAGCAGCAGCAGCGCCCTGGTGTGATTGGGTCCGTTCTCAGGGCGGTTCAGGAG
ACCTATGAGCATGCTAAAGAAGCAGCCACCGGAAAGTCTCAGGAGGCCGTTGAGAAGACG
AGGGAAACTGCTGAGGTTGCTTCGGAGAAGGCGAGAGAGGCTGCACAAAAGACAGGTCAA
ACTAAAGATGCAGCCGCCGAAAAAACTCGTGGAGTGTCGGACGCTGCCTCCCAGAAGGCC
CAGGAGGCGAAAGAGAAGATGCGCGAATCCAAGGATTATACGGCTGACAAATCCAAGGAA
GCCAAGGACTCCGCTGCCGAGAAAGCCAGGGAGACCAAGGATACGGGAGCCGAAAAAACA
GTTGAGCACAAGAATTCTGCAGCAGAGAAGGCGAAGGAGACTAAGGATGCGGTGGCTGGA
CAGGCAGGGGAGTACAAGGACTACGCTGCGGAGAAAGCGAGAGGGGTCAAGGACACCACA
TTGGGGAAGACAGGGGAGTACAAAGATTATGCAGCAGAAAAAGCCAAGGAAACCAAGGAC
GCCACAGTGCAGAAAGCAGCCGAGTACAAGGACTATACTGCAGGGAAAGCTGAGGAAGGC
AAGGATACTTCTGTTGGTAAGATTACTGAGCTCAAGGATTCTGCAGCTGACGCCGCTAGA
AGGGCCATGGAATATTTGACTGGTAAGAAAGAGGAAACCAAGCACAAAACTTCCGAGACT
GCAGAGGCTGCTAAGGAGAGGTTGACTGAAACTGAGGAAGCAGCGAGACGGAAAATGGAA
GAGTTAAAACTTAAAGGGAAGGAGGAGCACAAGGAAGCCGAAGGGCGCGAAACCCAGCAA
TCTAAGGACGCTCCAGGTGTCAAGGGGGTGCTGATCAACGTGCGGGAGACTCCCACCGGA
TATGTAGCCACCGCTCTGAAAGCCGCAGATCAGATGACCGCTCAAACTTTCAACGACGTG
GGCCCCCTGGACGAGGAGGAGATTGCACGTGTAGATCATCAAGAAAAGACCTAG

Peptide Sequence

PEP ID

VIT_08s0007g04240.t01
PEP Infomation

pep chromosome:12X:8:18215451:18217217:-1 gene:VIT_08s0007g04240 transcript:VIT_08s0007g04240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASGQEKEERAEPALRLAGSEKREAEREREEGAKLVSDRQKQEQQQRPGVIGSVLRAVQE
TYEHAKEAATGKSQEAVEKTRETAEVASEKAREAAQKTGQTKDAAAEKTRGVSDAASQKA
QEAKEKMRESKDYTADKSKEAKDSAAEKARETKDTGAEKTVEHKNSAAEKAKETKDAVAG
QAGEYKDYAAEKARGVKDTTLGKTGEYKDYAAEKAKETKDATVQKAAEYKDYTAGKAEEG
KDTSVGKITELKDSAADAARRAMEYLTGKKEETKHKTSETAEAAKERLTETEEAARRKME
ELKLKGKEEHKEAEGRETQQSKDAPGVKGVLINVRETPTGYVATALKAADQMTAQTFNDV
GPLDEEEIARVDHQEKT

Transcript Sequence

Transcript ID

VIT_08s0007g04240.t01
Transcript Infomation

cdna chromosome:12X:8:18215451:18217217:-1 gene:VIT_08s0007g04240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCACTGAAAGAGAAGCAAATCTGATAAGGAGTAAAATCGGCATTCGAATATTTCTTTGTT
TGAGTGTGAGAGGATCATGGCTTCGGGACAAGAAAAAGAAGAACGGGCCGAGCCAGCCTT
GAGGTTGGCCGGCTCGGAGAAGAGGGAGGCCGAAAGGGAGAGAGAAGAAGGAGCAAAATT
GGTTTCTGATCGACAGAAACAGGAGCAGCAGCAGCGCCCTGGTGTGATTGGGTCCGTTCT
CAGGGCGGTTCAGGAGACCTATGAGCATGCTAAAGAAGCAGCCACCGGAAAGTCTCAGGA
GGCCGTTGAGAAGACGAGGGAAACTGCTGAGGTTGCTTCGGAGAAGGCGAGAGAGGCTGC
ACAAAAGACAGGTCAAACTAAAGATGCAGCCGCCGAAAAAACTCGTGGAGTGTCGGACGC
TGCCTCCCAGAAGGCCCAGGAGGCGAAAGAGAAGATGCGCGAATCCAAGGATTATACGGC
TGACAAATCCAAGGAAGCCAAGGACTCCGCTGCCGAGAAAGCCAGGGAGACCAAGGATAC
GGGAGCCGAAAAAACAGTTGAGCACAAGAATTCTGCAGCAGAGAAGGCGAAGGAGACTAA
GGATGCGGTGGCTGGACAGGCAGGGGAGTACAAGGACTACGCTGCGGAGAAAGCGAGAGG
GGTCAAGGACACCACATTGGGGAAGACAGGGGAGTACAAAGATTATGCAGCAGAAAAAGC
CAAGGAAACCAAGGACGCCACAGTGCAGAAAGCAGCCGAGTACAAGGACTATACTGCAGG
GAAAGCTGAGGAAGGCAAGGATACTTCTGTTGGTAAGATTACTGAGCTCAAGGATTCTGC
AGCTGACGCCGCTAGAAGGGCCATGGAATATTTGACTGGTAAGAAAGAGGAAACCAAGCA
CAAAACTTCCGAGACTGCAGAGGCTGCTAAGGAGAGGTTGACTGAAACTGAGGAAGCAGC
GAGACGGAAAATGGAAGAGTTAAAACTTAAAGGGAAGGAGGAGCACAAGGAAGCCGAAGG
GCGCGAAACCCAGCAATCTAAGGACGCTCCAGGTGTCAAGGGGGTGCTGATCAACGTGCG
GGAGACTCCCACCGGATATGTAGCCACCGCTCTGAAAGCCGCAGATCAGATGACCGCTCA
AACTTTCAACGACGTGGGCCCCCTGGACGAGGAGGAGATTGCACGTGTAGATCATCAAGA
AAAGACCTAGTGATCACCTCTACGGTCCCACCCCACACAACCCATGTTATGTTGATTATG
GATCTCTCTTTTGGTCCTAGCATGTTTCATGTTCTTGTCCAAAAAACATAATACCATCTT
ATGTTTGCGC