Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g03250.t01
CDS Infomation

cds chromosome:12X:8:17243123:17250890:-1 gene:VIT_08s0007g03250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGGAGTGCTCAATTTCTCATCATCTCCACTATTCCGGCCACTCTCTCGTCCTAGA
GTTCCAAATACCAGAGTGTCCATTAAGGCGTCGTCAGAATTCTCAGAGAAGCCTCTGCCT
TCCACTTCGGTGAGTACCAAAGAAGATCCAAAATTGGGGTTTAATCCTCCGTCCAATTTC
AAGCCGCCGGAGCCGAAGCCGTTTTCGATCAGGCCCGATAAAGTTTTTGACATTTTGGGA
GCTTCTCTTGCTTTGATACTTCGGCTTGGGACGGGTGTTTTTGTTTCCGGGTATTCTGCA
TCTTTTGTATCCGAAAGTGAGATTCCACCTGACGAGTATATTCTAGAAATTGCTGGTTTC
AAGGTGAAAGAGACTTCAAAAGTGGGCCCTCGACCAGAGAAACCAATTGAGATATATGAA
TTTGAAAGCTGTCCATTTTGTCGGAAGGTTAGGGAAATTGTAGCAGTGCTGGATCTTGAT
GTTCTGTTTTATCCGTGCCCAAGAAATGGTCCAAATTTCCGTCCCAAGGTTGCTCAGATG
GGTGGAAAACAGCAGTTCCCTTACATGGTGGATCCAAACACAGGAGTTGCAATGTATGAA
TCGGATGACATAATTAAGTATTTGGTTGGGAAATATGGTGATGGAAATGTCCCTTTTATG
TTGTCACTTGGTCTACTAACGACTTTGACAGAAGGTTTTGCTATGATTGGTCGCATGGGG
AAGGGGAGCTCTTATACACCGTCAAAGCTACCACCCAAACCACTTGAACTATGGGCATAT
GAGGCTTCTCCATTCTGCAAAGTTGTACGAGAAGTGATTGTTGAGCTAGAGTTACCACAC
ATACTGCGCAGTTGTGCCCGTGGCAGCCCAAAACGTCAACTACTGTATCAGAAAGCTAGA
CATTTTCAGGCACCTTATTTAGAAGATCCAAACACTGGAGTGAAAATGTTTGAAAGTGCA
GAAATTGTGGAATATCTAAAAGCAACATATGCTCTTCAATAA

Peptide Sequence

PEP ID

VIT_08s0007g03250.t01
PEP Infomation

pep chromosome:12X:8:17243123:17250890:-1 gene:VIT_08s0007g03250 transcript:VIT_08s0007g03250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGVLNFSSSPLFRPLSRPRVPNTRVSIKASSEFSEKPLPSTSVSTKEDPKLGFNPPSNF
KPPEPKPFSIRPDKVFDILGASLALILRLGTGVFVSGYSASFVSESEIPPDEYILEIAGF
KVKETSKVGPRPEKPIEIYEFESCPFCRKVREIVAVLDLDVLFYPCPRNGPNFRPKVAQM
GGKQQFPYMVDPNTGVAMYESDDIIKYLVGKYGDGNVPFMLSLGLLTTLTEGFAMIGRMG
KGSSYTPSKLPPKPLELWAYEASPFCKVVREVIVELELPHILRSCARGSPKRQLLYQKAR
HFQAPYLEDPNTGVKMFESAEIVEYLKATYALQ

Transcript Sequence

Transcript ID

VIT_08s0007g03250.t01
Transcript Infomation

cdna chromosome:12X:8:17243123:17250890:-1 gene:VIT_08s0007g03250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCACCGATATCCAGGGCTGCTACCACCGGAAAAACATGGCGGGAGTGCTCAATTTCTCA
TCATCTCCACTATTCCGGCCACTCTCTCGTCCTAGAGTTCCAAATACCAGAGTGTCCATT
AAGGCGTCGTCAGAATTCTCAGAGAAGCCTCTGCCTTCCACTTCGGTGAGTACCAAAGAA
GATCCAAAATTGGGGTTTAATCCTCCGTCCAATTTCAAGCCGCCGGAGCCGAAGCCGTTT
TCGATCAGGCCCGATAAAGTTTTTGACATTTTGGGAGCTTCTCTTGCTTTGATACTTCGG
CTTGGGACGGGTGTTTTTGTTTCCGGGTATTCTGCATCTTTTGTATCCGAAAGTGAGATT
CCACCTGACGAGTATATTCTAGAAATTGCTGGTTTCAAGGTGAAAGAGACTTCAAAAGTG
GGCCCTCGACCAGAGAAACCAATTGAGATATATGAATTTGAAAGCTGTCCATTTTGTCGG
AAGGTTAGGGAAATTGTAGCAGTGCTGGATCTTGATGTTCTGTTTTATCCGTGCCCAAGA
AATGGTCCAAATTTCCGTCCCAAGGTTGCTCAGATGGGTGGAAAACAGCAGTTCCCTTAC
ATGGTGGATCCAAACACAGGAGTTGCAATGTATGAATCGGATGACATAATTAAGTATTTG
GTTGGGAAATATGGTGATGGAAATGTCCCTTTTATGTTGTCACTTGGTCTACTAACGACT
TTGACAGAAGGTTTTGCTATGATTGGTCGCATGGGGAAGGGGAGCTCTTATACACCGTCA
AAGCTACCACCCAAACCACTTGAACTATGGGCATATGAGGCTTCTCCATTCTGCAAAGTT
GTACGAGAAGTGATTGTTGAGCTAGAGTTACCACACATACTGCGCAGTTGTGCCCGTGGC
AGCCCAAAACGTCAACTACTGTATCAGAAAGCTAGACATTTTCAGGCACCTTATTTAGAA
GATCCAAACACTGGAGTGAAAATGTTTGAAAGTGCAGAAATTGTGGAATATCTAAAAGCA
ACATATGCTCTTCAATAAGCAAAAATTTCAAGAAGTGTTCAAGGCCTTTATGCTTTTGTA
TATTATCTGCATTCTGTTTTGTTTGTAGCGTCTGAACTTTGTTGTCATATCTAAAATGCC
TCTACATATGTACCCATCATATCATCTTGTATTTCAATTATAATGGAATGGAGGTGCTCT
AACTTGGTGC