Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g03200.t01
CDS Infomation

cds chromosome:12X:8:17203453:17209275:1 gene:VIT_08s0007g03200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCAAGGACAAGAGCAAGTGCTGCAGCTGCAGCACAGAATCCAAATGTATCTGAGAAC
CCCATTGAATGTGAAAAGCCTGCGGAACCTGAAGAGCGTGTGGACCTTGATGGAGACAAT
GAGGATACAAAGGAGGAAGAGGTTGAGTCTGAAGAAGTAGAGGAAGAAGTGGAAGAGATA
GAGGAAGAGGAGGAAGAAGAAGTAGAAGAAGAGGTGGAAGAAGATGAAGAGGAGGAAGAT
ACCTACTTTGCTGATGCACAAAAAGATCCAGATGGTGACGATGAGATAAAATCTGCCAAA
GGAGAAGTAGACAATGAAAATAGAAGGCATGCAGAACTACTAGCACTTCCTCCTCATGGG
TCAGAGGTCTACCTTGGTGGCATTCCAAATAATGCTTCTGAAGAGGATTTGAGGGGCTTT
TGTGAACCTGTAGGAGAAGTTACAGAGGTGAGAATTTTAAAGGGAAAAGATTCTGCTGAA
ACCAAGGGCTATGCTTTTGTGACATTCAGAACCAAGGAATTGGCTTCTAAGGCAATGGAG
GAGCTGAATAATGCCGAAATAAAGGGAAGAAAGATAAAGTGTTCAGCATCTCAAGTAAAG
CATCGATTGTTCATTAGTAATGTCCCCAGAACCTGGGAAGAGGAAGATATGAAGAAGGTT
GTAACAGAGATTGGACCTGGAGTTAATTTGGTGGACCTTTGGAAGGACCCACAGAACTCC
AGCCGGAACCGTGGATTTGCTTTCATCGAATATTATAATCATGCATGTGCAGAATACTCA
AGAAAAAAGATGTCAAATCCTAAATTTAAGCTTGACAATAATGCTTCAACTGTGAGTTGG
GCTGACCCTAAAAACGTGGAGTCTTCTGCTGCTTCACAGGTAAAGGCAGTATACATCAAG
AATTTACCAAAGTACATGACTCAAGATCAGTTAAGGGAGTTGTTTGGACAACATGGAAAG
ATCACAAAAGTAGTTATTCCTCCTGCAAAGGCTGGACAGGAAAACTGCAGATTTGGTTTT
GTTCACTTTGCTGAAAGGTCCAGTGCCATGAAGGCACTAAAGAACACTGAAAAATACGAA
ATTGATGGTCACATTTTAGGGTGTTCTCTTGCGAAACCACAGGCAGATAAGAAGTTTTCT
GGTGGATCAAATTCACAGAAGTCAGCCTTACTTCCAAGCTACCCTCCTTGGGTTGGTTAT
GGTTTGCTTGGTGGTGCTCCAGGTGCAGGATATGGTGCTGCAGGCTTTGGACAACCACTG
ACCTATGGTAGGGGACTGACTTCTGCTGGCACAGCCATGATGCCAATGCTTTTGCCTGAT
GGAAGGATTGGATATGTCCTGCAGCAGCCTGGAATGCAGCCATACACCCCTCCATCACAG
CCTAGGAGTGACAGGAGTGGAGGCGGCAGCACTAGTGGGGGAAGGCATAGTGGTGACAGA
GGCTATGGCCGCAGATGGTATAATCCATATTGA

Peptide Sequence

PEP ID

VIT_08s0007g03200.t01
PEP Infomation

pep chromosome:12X:8:17203453:17209275:1 gene:VIT_08s0007g03200 transcript:VIT_08s0007g03200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPRTRASAAAAAQNPNVSENPIECEKPAEPEERVDLDGDNEDTKEEEVESEEVEEEVEEI
EEEEEEEVEEEVEEDEEEEDTYFADAQKDPDGDDEIKSAKGEVDNENRRHAELLALPPHG
SEVYLGGIPNNASEEDLRGFCEPVGEVTEVRILKGKDSAETKGYAFVTFRTKELASKAME
ELNNAEIKGRKIKCSASQVKHRLFISNVPRTWEEEDMKKVVTEIGPGVNLVDLWKDPQNS
SRNRGFAFIEYYNHACAEYSRKKMSNPKFKLDNNASTVSWADPKNVESSAASQVKAVYIK
NLPKYMTQDQLRELFGQHGKITKVVIPPAKAGQENCRFGFVHFAERSSAMKALKNTEKYE
IDGHILGCSLAKPQADKKFSGGSNSQKSALLPSYPPWVGYGLLGGAPGAGYGAAGFGQPL
TYGRGLTSAGTAMMPMLLPDGRIGYVLQQPGMQPYTPPSQPRSDRSGGGSTSGGRHSGDR
GYGRRWYNPY

Transcript Sequence

Transcript ID

VIT_08s0007g03200.t01
Transcript Infomation

cdna chromosome:12X:8:17203453:17209275:1 gene:VIT_08s0007g03200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCAATTAGGGCAAACATCAAGCTTTTGAAGTGAGGAATTCAAAACTAGGGTTTTGACTG
TCCTGACATTCTCCTCCAGGCTTTCTTTTTACTCAGATAAATAGTTAAACAAATAAACTG
CCCATTATTTTTGGGCCAACATTCAGTGTCTAAATATCGAGACATTCATTGCTTCATTGT
TTTTGTACCATTGTTTCTGTACCCATTTAGCATCATCATCCTCTTGATTGTCATTCAGAA
TTATCTCTTGCCTGTCTCTATTAGTGCTGCTACTGTGTTATGATCCCTTTATCGGAAAAC
ATTCAATTGCAAACTCCTTGGAGCCATATTCATGGCACATATTCAATCGAGATTCTTACT
CTGCAACTCCTTTTGGCCTTTCATTTTGTTTCCACCTTTCCCCATTTGTTCTCTTTCTTC
TGCAAATGCTTCTGGCTTCTTTGCTTCCTTCACAGTTGTCTTGCAAGCTTACTTTATTAG
ATACGTACAATGCCAAGGACAAGAGCAAGTGCTGCAGCTGCAGCACAGAATCCAAATGTA
TCTGAGAACCCCATTGAATGTGAAAAGCCTGCGGAACCTGAAGAGCGTGTGGACCTTGAT
GGAGACAATGAGGATACAAAGGAGGAAGAGGTTGAGTCTGAAGAAGTAGAGGAAGAAGTG
GAAGAGATAGAGGAAGAGGAGGAAGAAGAAGTAGAAGAAGAGGTGGAAGAAGATGAAGAG
GAGGAAGATACCTACTTTGCTGATGCACAAAAAGATCCAGATGGTGACGATGAGATAAAA
TCTGCCAAAGGAGAAGTAGACAATGAAAATAGAAGGCATGCAGAACTACTAGCACTTCCT
CCTCATGGGTCAGAGGTCTACCTTGGTGGCATTCCAAATAATGCTTCTGAAGAGGATTTG
AGGGGCTTTTGTGAACCTGTAGGAGAAGTTACAGAGGTGAGAATTTTAAAGGGAAAAGAT
TCTGCTGAAACCAAGGGCTATGCTTTTGTGACATTCAGAACCAAGGAATTGGCTTCTAAG
GCAATGGAGGAGCTGAATAATGCCGAAATAAAGGGAAGAAAGATAAAGTGTTCAGCATCT
CAAGTAAAGCATCGATTGTTCATTAGTAATGTCCCCAGAACCTGGGAAGAGGAAGATATG
AAGAAGGTTGTAACAGAGATTGGACCTGGAGTTAATTTGGTGGACCTTTGGAAGGACCCA
CAGAACTCCAGCCGGAACCGTGGATTTGCTTTCATCGAATATTATAATCATGCATGTGCA
GAATACTCAAGAAAAAAGATGTCAAATCCTAAATTTAAGCTTGACAATAATGCTTCAACT
GTGAGTTGGGCTGACCCTAAAAACGTGGAGTCTTCTGCTGCTTCACAGGTAAAGGCAGTA
TACATCAAGAATTTACCAAAGTACATGACTCAAGATCAGTTAAGGGAGTTGTTTGGACAA
CATGGAAAGATCACAAAAGTAGTTATTCCTCCTGCAAAGGCTGGACAGGAAAACTGCAGA
TTTGGTTTTGTTCACTTTGCTGAAAGGTCCAGTGCCATGAAGGCACTAAAGAACACTGAA
AAATACGAAATTGATGGTCACATTTTAGGGTGTTCTCTTGCGAAACCACAGGCAGATAAG
AAGTTTTCTGGTGGATCAAATTCACAGAAGTCAGCCTTACTTCCAAGCTACCCTCCTTGG
GTTGGTTATGGTTTGCTTGGTGGTGCTCCAGGTGCAGGATATGGTGCTGCAGGCTTTGGA
CAACCACTGACCTATGGTAGGGGACTGACTTCTGCTGGCACAGCCATGATGCCAATGCTT
TTGCCTGATGGAAGGATTGGATATGTCCTGCAGCAGCCTGGAATGCAGCCATACACCCCT
CCATCACAGCCTAGGAGTGACAGGAGTGGAGGCGGCAGCACTAGTGGGGGAAGGCATAGT
GGTGACAGAGGCTATGGCCGCAGATGGTATAATCCATATTGAGTCAGTCGCCTTGTCTGA
ATGCAATTGTAGCAGGGGAAGTTCCTGCATCACTTAAATTACCGTAATTTGGTTGACACT
GATATTTAATGGTTTCACCAAATAGCCACAGCTTGTTGTGATGGAAATGTTGGAAGTTTT
CATACTTTGCCCATTGTATCAATGGTTGGAGATAAGCAGACTCGAACTGTTGACATCCGC
CACAGGGTAAACCCCCGCCTCTCAGGCCCCCCAACTGAACTGATGACTTCCACCACGTCA
AGGTGACACTCACTTGACCATCTGAATTTATCTGATCCCATTCCCACGCACTGGATATGA
ATATCAGATCAATCAAAATTCATTGCAA