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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g02880.t01
CDS Infomation

cds chromosome:12X:8:16943614:16944421:-1 gene:VIT_08s0007g02880 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casparian strip membrane protein 1 [Source:UniProtKB/Swiss-Prot;Acc:A7PP95]
Sequence

ATGAGCAGCGGCGCCAACGCAACTACAATCGATGTCCCAGAGACAAGGGCTGAAGCCAAA
GGGAAAGCCCCTCTCATTGCAGCTCCCATTGTTGCAACCACTAAAGCTACCCCACACCCG
AATGCAGGATGGAAGAAGGGGCTTGCTATATTCGATTTCCTCCTAAGGCTAGCTGCTATA
GCAGCTACACTGGCCGCTGCTACCACCATGGGAACTACTGATGAAACTCTTCCCTTCTTT
ACCCAGTTCTTCCAGTTCCAAGCTAGTTTTGACGACCTGCCTGCGTTTATGTTTTTCGTA
GTTGCGACTGCTATAGCCAGTGGCTACCTCGCCCTCTCTCTACCCTTTTCATTAGTGAGC
ATCTTTCGCCCACATGCGCAGGGAATAAGGCTGCTTCTGATCATCTCTGACACTGTGATG
CTTGCTTTGACCACGGCTGGGGCAGCCTCAGCGACTGCCATAGTTTACTTGGCACACAAC
GGCGACTCAAGCGCAAACTGGATAGCAATCTGTCAGCAATTTACTGATTTCTGCCAGAGT
GTGAGCGGGGCTGTGGTGGCATCATTCATAGCTGTGGTTATCTTCATGTTGTTGGTTATG
ATGTCTGCCTTGGCTCTCAGAAAGCACTGA

Peptide Sequence

PEP ID

VIT_08s0007g02880.t01
PEP Infomation

pep chromosome:12X:8:16943614:16944421:-1 gene:VIT_08s0007g02880 transcript:VIT_08s0007g02880.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casparian strip membrane protein 1 [Source:UniProtKB/Swiss-Prot;Acc:A7PP95]
Sequence

MSSGANATTIDVPETRAEAKGKAPLIAAPIVATTKATPHPNAGWKKGLAIFDFLLRLAAI
AATLAAATTMGTTDETLPFFTQFFQFQASFDDLPAFMFFVVATAIASGYLALSLPFSLVS
IFRPHAQGIRLLLIISDTVMLALTTAGAASATAIVYLAHNGDSSANWIAICQQFTDFCQS
VSGAVVASFIAVVIFMLLVMMSALALRKH

Transcript Sequence

Transcript ID

VIT_08s0007g02880.t01
Transcript Infomation

cdna chromosome:12X:8:16943614:16944421:-1 gene:VIT_08s0007g02880 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casparian strip membrane protein 1 [Source:UniProtKB/Swiss-Prot;Acc:A7PP95]
Sequence

ATGAGCAGCGGCGCCAACGCAACTACAATCGATGTCCCAGAGACAAGGGCTGAAGCCAAA
GGGAAAGCCCCTCTCATTGCAGCTCCCATTGTTGCAACCACTAAAGCTACCCCACACCCG
AATGCAGGATGGAAGAAGGGGCTTGCTATATTCGATTTCCTCCTAAGGCTAGCTGCTATA
GCAGCTACACTGGCCGCTGCTACCACCATGGGAACTACTGATGAAACTCTTCCCTTCTTT
ACCCAGTTCTTCCAGTTCCAAGCTAGTTTTGACGACCTGCCTGCGTTTATGTTTTTCGTA
GTTGCGACTGCTATAGCCAGTGGCTACCTCGCCCTCTCTCTACCCTTTTCATTAGTGAGC
ATCTTTCGCCCACATGCGCAGGGAATAAGGCTGCTTCTGATCATCTCTGACACTGTGATG
CTTGCTTTGACCACGGCTGGGGCAGCCTCAGCGACTGCCATAGTTTACTTGGCACACAAC
GGCGACTCAAGCGCAAACTGGATAGCAATCTGTCAGCAATTTACTGATTTCTGCCAGAGT
GTGAGCGGGGCTGTGGTGGCATCATTCATAGCTGTGGTTATCTTCATGTTGTTGGTTATG
ATGTCTGCCTTGGCTCTCAGAAAGCACTGA