Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g02240.t01
CDS Infomation

cds chromosome:12X:8:16261364:16265961:-1 gene:VIT_08s0007g02240 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger [Source:UniProtKB/TrEMBL;Acc:F6HKS5]
Sequence

ATGGCGTCTCAGGAGCCGTGGCAGATGGAGAACGGCAACCTCAAGGGCTCCAGCAAGGAG
ATTAAACATGGAAGGACCGCCCACAACATGTCCTCTTCTTCCCTTCGGAAGAAGTCCGAT
CTCTCCCTTGTCAACAAAGTTCCCTGCGGATTGGTGAGGCAGCTATTGGCCAATCTCCAG
GAGGTCATCCTCGGGACTAAGCTCTCCGTTCTCTTTCCGGCTATCCCGCTTGCCATCGTC
GCCCAGTACTACGGCTTTGCCGGGCCTTGGATTTTCGGTCTGAGCTTGCTTGGACTCACC
CCGCTTGCTGAACGGCTTGGCTTTCTGACCGAGCAAATAGCATATTATACTGGTCCAACA
GTTGGAGGGCTTCTAAATGCAACATGTGGTAATGCCACAGAGCTGATAATTGCAATATTC
GCTTTGAGCAAGAACAAAATTTTAGTGGTGAAGTATTCTCTACTGGGCTCTGTGCTCTCC
AATCTTCTTCTGGTTCTTGGGACTTCTCTCTTCTGTGGTGGCATTTACAACCTTAGAGAG
GAGCAGAAATATGATAGGAAACAATCCGACATAAACTCGCTCCTTCTGCTTCTGGGATTG
TTGTGCCACATGCTACCATTGATGTTTCGGTATGCAGCAAACCCCAGTGGTGCCGCTCTT
ATTGCAGACTCAACTCTCTCTCTATCAAGAGCTGGCAGCATTGTGATGCTCGTAGCATAC
TTGGCTTACCTAGTTTTCCAGTTGTGGACCCACAGGAAATTGTTTGAGGCACCAGAGGAT
GGTGATGATGACACTGTGAGTTCTGATGAAGAGCCTGTTATAGGATTTTGGAGTTCAGTT
GTCTGGCTGATTTTAATGACGGCTATCATTGCTTTATTATCTGAGTTTGTTGTCGGCACG
ATTGAGGTTGCATCAGAATCTTGGGGTATTTCTGTCAGCTTCATCAGCATAATCTTGTTG
CCCATAGTTGGAAACGCTGCAGAACATGCTGGAGCAGTCATATTCGCCTTTAAGAACAAG
TTGGATATATCTTTGGGTGTTGCTTTGGGGTCTGCAACTCAAATTGCAATGTTTGTGGTT
CCATTATGCGTGTTGGTTGCCTGGATAATGGGCATCAGGATGGATCTTGATTTCAGTCTC
CTTGAGACAAGCTCTCTTGCTTTAGCCATAATTGTCACAGCCTTCACTCTACAGGATGGA
TCTTCTCACTACATGAAAGGATTGGTCCTTCTGCTGTGCTATGTTGTTATCGGGGCCTGC
TTTTTCGTTTCCAAAACAACCCCCGACCAAGGAAATGGCATCACCCCGGGGATCAAGTTG
CCAACTGAAGGAGTCGTCAGTGCTTAA

Peptide Sequence

PEP ID

VIT_08s0007g02240.t01
PEP Infomation

pep chromosome:12X:8:16261364:16265961:-1 gene:VIT_08s0007g02240 transcript:VIT_08s0007g02240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger [Source:UniProtKB/TrEMBL;Acc:F6HKS5]
Sequence

MASQEPWQMENGNLKGSSKEIKHGRTAHNMSSSSLRKKSDLSLVNKVPCGLVRQLLANLQ
EVILGTKLSVLFPAIPLAIVAQYYGFAGPWIFGLSLLGLTPLAERLGFLTEQIAYYTGPT
VGGLLNATCGNATELIIAIFALSKNKILVVKYSLLGSVLSNLLLVLGTSLFCGGIYNLRE
EQKYDRKQSDINSLLLLLGLLCHMLPLMFRYAANPSGAALIADSTLSLSRAGSIVMLVAY
LAYLVFQLWTHRKLFEAPEDGDDDTVSSDEEPVIGFWSSVVWLILMTAIIALLSEFVVGT
IEVASESWGISVSFISIILLPIVGNAAEHAGAVIFAFKNKLDISLGVALGSATQIAMFVV
PLCVLVAWIMGIRMDLDFSLLETSSLALAIIVTAFTLQDGSSHYMKGLVLLLCYVVIGAC
FFVSKTTPDQGNGITPGIKLPTEGVVSA

Transcript Sequence

Transcript ID

VIT_08s0007g02240.t01
Transcript Infomation

cdna chromosome:12X:8:16261364:16265961:-1 gene:VIT_08s0007g02240 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger [Source:UniProtKB/TrEMBL;Acc:F6HKS5]
Sequence

GGAAATCTATCTGCTAGCTATCTATTCTGTAGATTAATTATCGGGAGAAACATCAGTAGA
GTTGCACCTACTAGGTAAGTTAAGAATGGCGTCTCAGGAGCCGTGGCAGATGGAGAACGG
CAACCTCAAGGGCTCCAGCAAGGAGATTAAACATGGAAGGACCGCCCACAACATGTCCTC
TTCTTCCCTTCGGAAGAAGTCCGATCTCTCCCTTGTCAACAAAGTTCCCTGCGGATTGGT
GAGGCAGCTATTGGCCAATCTCCAGGAGGTCATCCTCGGGACTAAGCTCTCCGTTCTCTT
TCCGGCTATCCCGCTTGCCATCGTCGCCCAGTACTACGGCTTTGCCGGGCCTTGGATTTT
CGGTCTGAGCTTGCTTGGACTCACCCCGCTTGCTGAACGGCTTGGCTTTCTGACCGAGCA
AATAGCATATTATACTGGTCCAACAGTTGGAGGGCTTCTAAATGCAACATGTGGTAATGC
CACAGAGCTGATAATTGCAATATTCGCTTTGAGCAAGAACAAAATTTTAGTGGTGAAGTA
TTCTCTACTGGGCTCTGTGCTCTCCAATCTTCTTCTGGTTCTTGGGACTTCTCTCTTCTG
TGGTGGCATTTACAACCTTAGAGAGGAGCAGAAATATGATAGGAAACAATCCGACATAAA
CTCGCTCCTTCTGCTTCTGGGATTGTTGTGCCACATGCTACCATTGATGTTTCGGTATGC
AGCAAACCCCAGTGGTGCCGCTCTTATTGCAGACTCAACTCTCTCTCTATCAAGAGCTGG
CAGCATTGTGATGCTCGTAGCATACTTGGCTTACCTAGTTTTCCAGTTGTGGACCCACAG
GAAATTGTTTGAGGCACCAGAGGATGGTGATGATGACACTGTGAGTTCTGATGAAGAGCC
TGTTATAGGATTTTGGAGTTCAGTTGTCTGGCTGATTTTAATGACGGCTATCATTGCTTT
ATTATCTGAGTTTGTTGTCGGCACGATTGAGGTTGCATCAGAATCTTGGGGTATTTCTGT
CAGCTTCATCAGCATAATCTTGTTGCCCATAGTTGGAAACGCTGCAGAACATGCTGGAGC
AGTCATATTCGCCTTTAAGAACAAGTTGGATATATCTTTGGGTGTTGCTTTGGGGTCTGC
AACTCAAATTGCAATGTTTGTGGTTCCATTATGCGTGTTGGTTGCCTGGATAATGGGCAT
CAGGATGGATCTTGATTTCAGTCTCCTTGAGACAAGCTCTCTTGCTTTAGCCATAATTGT
CACAGCCTTCACTCTACAGGATGGATCTTCTCACTACATGAAAGGATTGGTCCTTCTGCT
GTGCTATGTTGTTATCGGGGCCTGCTTTTTCGTTTCCAAAACAACCCCCGACCAAGGAAA
TGGCATCACCCCGGGGATCAAGTTGCCAACTGAAGGAGTCGTCAGTGCTTAATAGGCTTT
GGCCCTTTGGGGTCGTTTCTCTCCTGATGAAGAAAGCAATGTTGTAATGCTATTTTTCCA
ACAATCCCTTGATTGGAAATGGGAGGATCAAGTGCAATATTTGTTATTCTTTCATTTGGA
TTGGCCTTGTGCAGCGTAGGGCGTGAAGTTCACATGCATGTTACATTTGGCATTAGAGAT
TGTGGAGGCTCCAAGGTCGAGAAGGATATTAGTGGTGGATGTAGCGTTACAACTTGATGA
AGAAGACCAGCATACAAGCATATATGGTCATGTATATTCGTTGGTAACTGAGTATGGTTT
GTTATGCTAGTAGAGTGGTGGGTGGGGCACCGCACAGGGCTACTTTCCTTCTGTAGTTCT
ATTATCAATAAATGGAAATTGGTGTTTTGAGTTTGCTATGTCTTTGTAAAATTCTGGAAC
GATTTCAACTTCTATTATTGTTTCCTAATGCGGCACCCCTATAAGTAT