Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g01610.t01
CDS Infomation

cds chromosome:12X:8:15696918:15699430:1 gene:VIT_08s0007g01610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGCAAGGGCTTCTGCTATGTAATCCTTCATACAACGCTCCATCTCTGCCCTCCCTT
CATTTCCCAATATCCACAGCTAAACGTACCACTGTCATCTCTGTAAGCCTTGATTCAGCC
GATACCCGACCGCTTACAGCCAGAGAAAGAAGACAACTCAGAAACGAGAGGAGAGAGAGC
AAAGCCACCACCAATTGGAGAGAAGAGGTGGAGGAAAGGCTTCTCAAGAAGCCCAAGAAG
AGGTATGCTTCCTGGACCGAAGAGCTTAACCTCGACAACCTCGCTCTTTTGGGTCCTCAA
TGGTGGGTCGTTCGCGTTTCACGGGTTTCGGGTCAGGAGTCAGCGGAACGACTCGCCCGA
TCCTTGGCCAGGAACTTCCCCGACATTGATTTCAAGGTTTATGTTCCATCTGTCCAAGTG
AAAAGGAAATTAAAGAATGGATCGATTTCAGTTAAACCAAAACCCCTCTTTCCTGGGTGT
GTATTTTTAAGGTGTGTACTGAACAAGGAGACACATGACTTTATAAGAGAATGTGATGGG
ATTGGAGGCTTTGTTGGATCCAAAGTTGGAAATACAAAAAGGCAGATTAACAAACCCAGG
CCAGTTTCTGTTGATGATATTGAAGCAATCTTCAAACAATCAAAAGAAGAACAGGAAAAA
GCAGACAAAGCTTTTGAAGAAGAGCAGCAAAAAGAAGAAACTATTAACCCTGAGAAACTG
ATTATATACCCTCATTTAGATTCCAAAGATGTTACAATATCTGTAGTAGATTCCAAGCCA
AAAAGGCGATCCAGAAAAGCTTCCAAACCTATTGCAGATGGTGCATCAACAGCAAAGCAT
GATAAGCTCCTTAAACCAGGTTCAACCGTCCGAGTTGTATCTGGGACTTTTACAGAGTTC
TCGGGCAGCCTTAAAAAGCTGGATCGCAAAAATGGAAAGGCAACTGTTGGATTCACTCTC
TTTGGAAAGGAGACCTTAGTGGACCTTGATGTCAATGAAATTGTTGCAGAAACAAAGTGA

Peptide Sequence

PEP ID

VIT_08s0007g01610.t01
PEP Infomation

pep chromosome:12X:8:15696918:15699430:1 gene:VIT_08s0007g01610 transcript:VIT_08s0007g01610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKQGLLLCNPSYNAPSLPSLHFPISTAKRTTVISVSLDSADTRPLTARERRQLRNERRES
KATTNWREEVEERLLKKPKKRYASWTEELNLDNLALLGPQWWVVRVSRVSGQESAERLAR
SLARNFPDIDFKVYVPSVQVKRKLKNGSISVKPKPLFPGCVFLRCVLNKETHDFIRECDG
IGGFVGSKVGNTKRQINKPRPVSVDDIEAIFKQSKEEQEKADKAFEEEQQKEETINPEKL
IIYPHLDSKDVTISVVDSKPKRRSRKASKPIADGASTAKHDKLLKPGSTVRVVSGTFTEF
SGSLKKLDRKNGKATVGFTLFGKETLVDLDVNEIVAETK

Transcript Sequence

Transcript ID

VIT_08s0007g01610.t01
Transcript Infomation

cdna chromosome:12X:8:15696918:15699430:1 gene:VIT_08s0007g01610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTAGCAGCAGCAGGAGAAGATGAAGCAAGGGCTTCTGCTATGTAATCCTTCATACAACG
CTCCATCTCTGCCCTCCCTTCATTTCCCAATATCCACAGCTAAACGTACCACTGTCATCT
CTGTAAGCCTTGATTCAGCCGATACCCGACCGCTTACAGCCAGAGAAAGAAGACAACTCA
GAAACGAGAGGAGAGAGAGCAAAGCCACCACCAATTGGAGAGAAGAGGTGGAGGAAAGGC
TTCTCAAGAAGCCCAAGAAGAGGTATGCTTCCTGGACCGAAGAGCTTAACCTCGACAACC
TCGCTCTTTTGGGTCCTCAATGGTGGGTCGTTCGCGTTTCACGGGTTTCGGGTCAGGAGT
CAGCGGAACGACTCGCCCGATCCTTGGCCAGGAACTTCCCCGACATTGATTTCAAGGTTT
ATGTTCCATCTGTCCAAGTGAAAAGGAAATTAAAGAATGGATCGATTTCAGTTAAACCAA
AACCCCTCTTTCCTGGGTGTGTATTTTTAAGGTGTGTACTGAACAAGGAGACACATGACT
TTATAAGAGAATGTGATGGGATTGGAGGCTTTGTTGGATCCAAAGTTGGAAATACAAAAA
GGCAGATTAACAAACCCAGGCCAGTTTCTGTTGATGATATTGAAGCAATCTTCAAACAAT
CAAAAGAAGAACAGGAAAAAGCAGACAAAGCTTTTGAAGAAGAGCAGCAAAAAGAAGAAA
CTATTAACCCTGAGAAACTGATTATATACCCTCATTTAGATTCCAAAGATGTTACAATAT
CTGTAGTAGATTCCAAGCCAAAAAGGCGATCCAGAAAAGCTTCCAAACCTATTGCAGATG
GTGCATCAACAGCAAAGCATGATAAGCTCCTTAAACCAGGTTCAACCGTCCGAGTTGTAT
CTGGGACTTTTACAGAGTTCTCGGGCAGCCTTAAAAAGCTGGATCGCAAAAATGGAAAGG
CAACTGTTGGATTCACTCTCTTTGGAAAGGAGACCTTAGTGGACCTTGATGTCAATGAAA
TTGTTGCAGAAACAAAGTGATGTAAGCAACTTTTTCACTGATAATTCTTATTAAATGTTA
AGTTTATCCATTTCATAGCTTTAATTCCACTCTCCTTTATTGTATTTTCACCCTTTTTCC
TGCATAGCCTTTGAATCTAGAACGTACACTGTGA