Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g00600.t01
CDS Infomation

cds chromosome:12X:8:14844802:14847616:1 gene:VIT_08s0007g00600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase [Source:UniProtKB/TrEMBL;Acc:D7THL9]
Sequence

ATGGGTTCTTCTCGTCTTCCTCCATCAGCTTCAATGGCAGCTCTCGTATTTGGTTTCTTG
GTTTTATCAGCATTGCCGGAGCTCGCAGCAGGCGTGACCAGGCACTACACATTCAATATT
ACGTTGCACAATGTGACAAGGCTGTGCCAGACGAAGAGCATTATTAGCGTGAATGGACGT
TTCCCAGGTCCTCCCGTTGTAGCAAGGGAAGGTGATAGAGTGGTGGTTAAAGTGGTTAAT
AAAGTTTCCAACAATGTGACTATTCATTGGCACGGTGTTCGCCAGCTTCGAAGTGCTTGG
GCAGATGGACCGACGTACGTGACACAGTGTCCAATACAGACCGGCCAGACATACACCTAC
AACTTCACCATCACAGGCCAGAGAGGAACTCTCCTGTGGCATGCTCACATCTCATGGCTG
AGAGCTACGCTGTATGGCCCTATCATCATCCTCCCCAGGCGCAATGAATCTTACCCATTC
CCAAAGCCCCACAAGGAAGTGACAATTATTTTTGGAGAGTGGTGGAATGCAGACCCAGAG
GCAGTGATCAGCCAGGCGCTGCAGAGTGGAGGAGGCCCAAATGTTTCAGATGCGTACACC
ATCAACGGTCTTCCAGGCCCACTGTACAATTGTTCCTCCAAAGACACATACAAGCTGAAG
GTGAAACCAGGGAAGACCTACCTCCTCCGTTTGATCAACGCTGCACTCAACGACGAACTT
TTCTTCAGCATAGCCAACCACACCCTCACCGTGGTTGAAGGCGATGCTACTTATGTCAAA
CCTTTTGACACCAACGTACTTGTCATCACCCCAGGCCAAACCACCAATGTTCTCCTCAAG
ACCAAGCCCTACTTCCCCAACTCCACCTTCCTCATGGCCGCAAGGCCCTACTTCACCGGC
CAAGGCACCTTTGACAATTCCACAACTGCCGGCATTCTGGAATACGTGAACCCATCAAAG
CCCACTTCCTCTCAAAATAAACTTCCCCTCCTCAAACCAACCCTCCCACCTGTCAATCCC
AATGCCACCGGCTTCGTCACCAACTTCACCAGGAAATTCCGTAGCTTGGCTACTGCTAAA
TTCCCTGCCAACGTCCCCCAAACTGTGGACAAGCGATTTTTCTTCACTATTGGACTTGGG
TCCAACCCATGTCCTAAAGACATGACATGCCAGGGACCCAATGGCACCAAATTTTCAGCT
TCAGTCAACAACATCTCTTTTATACTTCCATCAGTATCTATCATGCAAGCCTATTTCTTT
GGGCAGAATGGTGTTTACACCACTGATTTCCCAACATACCCACCAGTGCCCTTCAACTAT
ACGGGAACTCCACCAAACAACACCATGGTGAGCAACGGAACCCGAGTTGTGGTGCTCCCA
TTCAACACCAGTGTGGAGCTGGTAATGCAGGACACCTCCATTCTCGGTGCTGAGAGTCAC
CCTTTTCACCTCCATGGTTACAATTTCTATGTGGTCGGCCAAGGGATTGGCAACTATGAC
CCAAACACGGATCCTGCCAACTTCAATCTAGTCGACCCCGTTGAAAGGAACACCTTTGGA
GTTCCGGCCGGTGGTTGGGTTGCCATTCGCTTCCAAGCTGACAACCCAGGTGTATGGTTC
ATGCACTGCCACTTGGATGTCCACACAAGCTGGGGCTTGAGGATGGCATGGATCGTACTG
GATGGACAGCAACCCAATCAGAAGTTACCACCCCCACCCTCCGACCTCCCCAAATGTTGA

Peptide Sequence

PEP ID

VIT_08s0007g00600.t01
PEP Infomation

pep chromosome:12X:8:14844802:14847616:1 gene:VIT_08s0007g00600 transcript:VIT_08s0007g00600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase [Source:UniProtKB/TrEMBL;Acc:D7THL9]
Sequence

MGSSRLPPSASMAALVFGFLVLSALPELAAGVTRHYTFNITLHNVTRLCQTKSIISVNGR
FPGPPVVAREGDRVVVKVVNKVSNNVTIHWHGVRQLRSAWADGPTYVTQCPIQTGQTYTY
NFTITGQRGTLLWHAHISWLRATLYGPIIILPRRNESYPFPKPHKEVTIIFGEWWNADPE
AVISQALQSGGGPNVSDAYTINGLPGPLYNCSSKDTYKLKVKPGKTYLLRLINAALNDEL
FFSIANHTLTVVEGDATYVKPFDTNVLVITPGQTTNVLLKTKPYFPNSTFLMAARPYFTG
QGTFDNSTTAGILEYVNPSKPTSSQNKLPLLKPTLPPVNPNATGFVTNFTRKFRSLATAK
FPANVPQTVDKRFFFTIGLGSNPCPKDMTCQGPNGTKFSASVNNISFILPSVSIMQAYFF
GQNGVYTTDFPTYPPVPFNYTGTPPNNTMVSNGTRVVVLPFNTSVELVMQDTSILGAESH
PFHLHGYNFYVVGQGIGNYDPNTDPANFNLVDPVERNTFGVPAGGWVAIRFQADNPGVWF
MHCHLDVHTSWGLRMAWIVLDGQQPNQKLPPPPSDLPKC

Transcript Sequence

Transcript ID

VIT_08s0007g00600.t01
Transcript Infomation

cdna chromosome:12X:8:14844802:14847616:1 gene:VIT_08s0007g00600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Laccase [Source:UniProtKB/TrEMBL;Acc:D7THL9]
Sequence

ATGGGTTCTTCTCGTCTTCCTCCATCAGCTTCAATGGCAGCTCTCGTATTTGGTTTCTTG
GTTTTATCAGCATTGCCGGAGCTCGCAGCAGGCGTGACCAGGCACTACACATTCAATATT
ACGTTGCACAATGTGACAAGGCTGTGCCAGACGAAGAGCATTATTAGCGTGAATGGACGT
TTCCCAGGTCCTCCCGTTGTAGCAAGGGAAGGTGATAGAGTGGTGGTTAAAGTGGTTAAT
AAAGTTTCCAACAATGTGACTATTCATTGGCACGGTGTTCGCCAGCTTCGAAGTGCTTGG
GCAGATGGACCGACGTACGTGACACAGTGTCCAATACAGACCGGCCAGACATACACCTAC
AACTTCACCATCACAGGCCAGAGAGGAACTCTCCTGTGGCATGCTCACATCTCATGGCTG
AGAGCTACGCTGTATGGCCCTATCATCATCCTCCCCAGGCGCAATGAATCTTACCCATTC
CCAAAGCCCCACAAGGAAGTGACAATTATTTTTGGAGAGTGGTGGAATGCAGACCCAGAG
GCAGTGATCAGCCAGGCGCTGCAGAGTGGAGGAGGCCCAAATGTTTCAGATGCGTACACC
ATCAACGGTCTTCCAGGCCCACTGTACAATTGTTCCTCCAAAGACACATACAAGCTGAAG
GTGAAACCAGGGAAGACCTACCTCCTCCGTTTGATCAACGCTGCACTCAACGACGAACTT
TTCTTCAGCATAGCCAACCACACCCTCACCGTGGTTGAAGGCGATGCTACTTATGTCAAA
CCTTTTGACACCAACGTACTTGTCATCACCCCAGGCCAAACCACCAATGTTCTCCTCAAG
ACCAAGCCCTACTTCCCCAACTCCACCTTCCTCATGGCCGCAAGGCCCTACTTCACCGGC
CAAGGCACCTTTGACAATTCCACAACTGCCGGCATTCTGGAATACGTGAACCCATCAAAG
CCCACTTCCTCTCAAAATAAACTTCCCCTCCTCAAACCAACCCTCCCACCTGTCAATCCC
AATGCCACCGGCTTCGTCACCAACTTCACCAGGAAATTCCGTAGCTTGGCTACTGCTAAA
TTCCCTGCCAACGTCCCCCAAACTGTGGACAAGCGATTTTTCTTCACTATTGGACTTGGG
TCCAACCCATGTCCTAAAGACATGACATGCCAGGGACCCAATGGCACCAAATTTTCAGCT
TCAGTCAACAACATCTCTTTTATACTTCCATCAGTATCTATCATGCAAGCCTATTTCTTT
GGGCAGAATGGTGTTTACACCACTGATTTCCCAACATACCCACCAGTGCCCTTCAACTAT
ACGGGAACTCCACCAAACAACACCATGGTGAGCAACGGAACCCGAGTTGTGGTGCTCCCA
TTCAACACCAGTGTGGAGCTGGTAATGCAGGACACCTCCATTCTCGGTGCTGAGAGTCAC
CCTTTTCACCTCCATGGTTACAATTTCTATGTGGTCGGCCAAGGGATTGGCAACTATGAC
CCAAACACGGATCCTGCCAACTTCAATCTAGTCGACCCCGTTGAAAGGAACACCTTTGGA
GTTCCGGCCGGTGGTTGGGTTGCCATTCGCTTCCAAGCTGACAACCCAGGTGTATGGTTC
ATGCACTGCCACTTGGATGTCCACACAAGCTGGGGCTTGAGGATGGCATGGATCGTACTG
GATGGACAGCAACCCAATCAGAAGTTACCACCCCCACCCTCCGACCTCCCCAAATGTTGA
CTTTCACCTGTGATGGGTCCGAACTGGGATTGCAAATTTTTTGAGTGTCTCTGTTATCGA
CATTTTAAATCATAATGGTAATATTTTTTTGCCGTGTGCCTGATCAAGAGCGCATTATCT
CTCCCCCTGGTTTGTCAAATTTGTCGGTTGGCTGAAAGGGAGAGTGGAGCAGCTCATGAG
AAACTATCCCATGTATAAATTTCATGAATGAAAATCATATGATACGGTTTCACCCACCAA
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