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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g00440.t01
CDS Infomation

cds chromosome:12X:8:14732840:14734936:-1 gene:VIT_08s0007g00440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BPE2]
Sequence

ATGGCTCTTCTCACTCTTCTTTCCCTTGCTTCACTCCTCTCCTTTCTTACCCTGGTTCAT
GCTCGAATCCCCGGCGTTTACACCAGTGGGCCGTGGGAGAGTGCTCATGCCACATTCTAC
GGTGGCAGCGATGCCTCCGGTACTATGGGGGGTGCTTGTGGGTATGGGAATCTCTACAGC
CAGGGCTACGGAGTCAACACGGCAGCACTGAGCACCGCACTGTTCAACAGCGGGCTCAGC
TGTGGCGCTTGCTTTGAGATCAAGTGCGCCAACGACCCCAAGTGGTGCCACTCCGGCAGC
CCCTCCATCTTCGTCACCGCCACCAACTTCTGCCCACCTAACTACGCTCTTCCCAGCGAC
AATGGCGGCTGGTGTAACCCTCCTCGTCCCCACTTCGACCTTGCCATGCCCATGTTTCTC
AAGATCGCCGAGTACCGCGCCGGAATTGTCCCCGTTGCTTTCCGTCGGGTATCCTGCCGA
AAGAGTGGAGGAATCAGATTCACCGTCAACGGTTTCCGCTACTTCAACCTGGTTCTGGTC
ACCAACGTCGCGGGTGCAGGGGATATCGTGCGGGTGAGCATCAAAGGATCCAAAACCGGG
TGGATGAGCATGAGCCGCAACTGGGGACAGAACTGGCAGTCCAACGCCGTTCTGGTGGGC
CAATCACTCTCCTTCAGAGTCACCGGAAGTGACCGCCGCACCTCCACCTCCTGGAACGTC
GCCCCCGCTAACTGGCAGTTCGGTCAAACTTTCTCCGGCAGGAACTTCCGGATCTAA

Peptide Sequence

PEP ID

VIT_08s0007g00440.t01
PEP Infomation

pep chromosome:12X:8:14732840:14734936:-1 gene:VIT_08s0007g00440 transcript:VIT_08s0007g00440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BPE2]
Sequence

MALLTLLSLASLLSFLTLVHARIPGVYTSGPWESAHATFYGGSDASGTMGGACGYGNLYS
QGYGVNTAALSTALFNSGLSCGACFEIKCANDPKWCHSGSPSIFVTATNFCPPNYALPSD
NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVSCRKSGGIRFTVNGFRYFNLVLV
TNVAGAGDIVRVSIKGSKTGWMSMSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNV
APANWQFGQTFSGRNFRI

Transcript Sequence

Transcript ID

VIT_08s0007g00440.t01
Transcript Infomation

cdna chromosome:12X:8:14732840:14734936:-1 gene:VIT_08s0007g00440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5BPE2]
Sequence

CCCAACCCAAAGCCCATCTCTCTCTCTCTCTCTCTCTCTCAATGGCTCTTCTCACTCTTC
TTTCCCTTGCTTCACTCCTCTCCTTTCTTACCCTGGTTCATGCTCGAATCCCCGGCGTTT
ACACCAGTGGGCCGTGGGAGAGTGCTCATGCCACATTCTACGGTGGCAGCGATGCCTCCG
GTACTATGGGGGGTGCTTGTGGGTATGGGAATCTCTACAGCCAGGGCTACGGAGTCAACA
CGGCAGCACTGAGCACCGCACTGTTCAACAGCGGGCTCAGCTGTGGCGCTTGCTTTGAGA
TCAAGTGCGCCAACGACCCCAAGTGGTGCCACTCCGGCAGCCCCTCCATCTTCGTCACCG
CCACCAACTTCTGCCCACCTAACTACGCTCTTCCCAGCGACAATGGCGGCTGGTGTAACC
CTCCTCGTCCCCACTTCGACCTTGCCATGCCCATGTTTCTCAAGATCGCCGAGTACCGCG
CCGGAATTGTCCCCGTTGCTTTCCGTCGGGTATCCTGCCGAAAGAGTGGAGGAATCAGAT
TCACCGTCAACGGTTTCCGCTACTTCAACCTGGTTCTGGTCACCAACGTCGCGGGTGCAG
GGGATATCGTGCGGGTGAGCATCAAAGGATCCAAAACCGGGTGGATGAGCATGAGCCGCA
ACTGGGGACAGAACTGGCAGTCCAACGCCGTTCTGGTGGGCCAATCACTCTCCTTCAGAG
TCACCGGAAGTGACCGCCGCACCTCCACCTCCTGGAACGTCGCCCCCGCTAACTGGCAGT
TCGGTCAAACTTTCTCCGGCAGGAACTTCCGGATCTAAGTCTTGCTCCGACATTTTAAAA
GAAATTCCCGCCTTCAGTTTTCCTTTATTTTCCCGGGAAAATTGAACGTAGCGGGTTGGT
AAAAGCATAATTGGGGTTTGGGTTTTGGTAGGATTAGCGCAAAAGACCAAGGAAAATGAT
AGGGTAGGAAAGTGACTAAGTGAAGTGAGTGTGTGCTAAGTTGTAACTGTTTTCTTTGTT
CTTTTCTTTTTTCACTTTTATAATTTTATTTCCTTTTTGACTTTGATGGTCTGTTGTCAG
TGGGGCTGTTTCGGGTGAAAGTGAAAACCGGCAAAAAAAAAAAACAAAAAAAAAGGCAAA
GCGTTGGGGCTGAAGTGGCTGCAAAGCAAAAACATGTAGCCCGCAGCTTCGATAATATTT
ATGTATCTCTAAATCACTATGAATTATAAATATATGTTTGTGTTATTTGAATCAA