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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g00290.t01
CDS Infomation

cds chromosome:12X:8:14603038:14609600:1 gene:VIT_08s0007g00290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:D7THP4]
Sequence

ATGGCGAACCCTAGGCTTCGACTTCTCCTTCCTTGGAGGAAATTCTCCAAAAGAGACTGG
GCAATCGCAGCCTTCGGATTCACCATCTTCTTCTTCGCTCTCTCTTTCACCTCCACCAAA
ACCATCGCACCCCTGGATTTGGTTGACTTGACGTTGGTGCGCCATGCCAAGGATAAAGGC
GCCGTTTGTTTAGATGGTAGTGCCCCTGGATATCATTTTCGAAGTGGTTTTGGATCTGGC
TCTAACAATTGGGTTCTTCATATAGAGGGTGGAGGCTGGTGTAATACTGTAGCATCTTGT
TTAATTCGTAAAACAACTGCACTAGGTTCTTCAAACTACATGGAACGTCAAGTTCGCTTT
TCCGGAATTTTAAGCCATGACTCATCACAGAATCCTGATTTCTTTGACTGGAATAAAGTC
AAGCTGCGGTATTGTGATGGTGCTTCTTTTGCTGGAAACTCTCAAAAGAATGAAACACAA
CTCTTCTTCAGAGGTCAGCGCATCTGGGAAGCAGTTATGGATGAACTCTTATCAATAGGA
CTGTCTAATGCTAAACAGGTTCTTCTTTCAGGGTGCTCTGCTGGAGGATTGGCAACTCTC
ATACACTGTGATGACTTCCGGGGGATTTTGCCAAAGGATGCCACTGTCAAATGCCTTGCT
GATGCAGGTTTTTTCCTTGATGAGAAAGATGTTACTGGAAATCGCAGAATAAGGTCTTTC
TATAGTGATGTTGTCCACCTTCAGGGTGTAGCAAACAGTTTGGATAAGGATTGTGTTGGA
AGAATGGAACCATCCCAGTGTTTCTTTCCTCAAGAATTTATCAAGAACATAAAAACCCCA
GTTTTCCTTGTCAACCCAGCTTATGATTTTTGGCAGATTCAATATGTTTTGATACCAGCT
GAATCAGATCCTTCTGGCAAATGGGCAAAATGCAGACTGAGCATTCAGAAGTGTAGTCCT
GCCCAGATTGAAATTCTACATGGTTTCCGAAATTCTATGCTAAAGACACTGAGTGAGTTC
CAACAAAACAAGGATGGAGGCATGTTTATAAACTCTTGCTTTAGTCACTGCCAAACATTG
ATGACTGAGACATGGCATTCTCCTTATTCTCCCAGGATCAACAATAAGACCATTGCAGAA
TCTGTAGGTGACTGGTACTTCAACCGAAAATTAGTGAAGCAAATTGATTGCCCTTATCCA
TGTAATCCTACTTGTTCTAACATGGACTTTACTTGGCATCGATGA

Peptide Sequence

PEP ID

VIT_08s0007g00290.t01
PEP Infomation

pep chromosome:12X:8:14603038:14609600:1 gene:VIT_08s0007g00290 transcript:VIT_08s0007g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:D7THP4]
Sequence

MANPRLRLLLPWRKFSKRDWAIAAFGFTIFFFALSFTSTKTIAPLDLVDLTLVRHAKDKG
AVCLDGSAPGYHFRSGFGSGSNNWVLHIEGGGWCNTVASCLIRKTTALGSSNYMERQVRF
SGILSHDSSQNPDFFDWNKVKLRYCDGASFAGNSQKNETQLFFRGQRIWEAVMDELLSIG
LSNAKQVLLSGCSAGGLATLIHCDDFRGILPKDATVKCLADAGFFLDEKDVTGNRRIRSF
YSDVVHLQGVANSLDKDCVGRMEPSQCFFPQEFIKNIKTPVFLVNPAYDFWQIQYVLIPA
ESDPSGKWAKCRLSIQKCSPAQIEILHGFRNSMLKTLSEFQQNKDGGMFINSCFSHCQTL
MTETWHSPYSPRINNKTIAESVGDWYFNRKLVKQIDCPYPCNPTCSNMDFTWHR

Transcript Sequence

Transcript ID

VIT_08s0007g00290.t01
Transcript Infomation

cdna chromosome:12X:8:14603038:14609600:1 gene:VIT_08s0007g00290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:D7THP4]
Sequence

TAGCTGAAGAGTTGCTGCGTCTCTGTCGTCCCGTGCTGTGATTAGGCTCAGTCTAGTTGA
TGCCTTTGTCCATCCCAAATGGCGAACCCTAGGCTTCGACTTCTCCTTCCTTGGAGGAAA
TTCTCCAAAAGAGACTGGGCAATCGCAGCCTTCGGATTCACCATCTTCTTCTTCGCTCTC
TCTTTCACCTCCACCAAAACCATCGCACCCCTGGATTTGGTTGACTTGACGTTGGTGCGC
CATGCCAAGGATAAAGGCGCCGTTTGTTTAGATGGTAGTGCCCCTGGATATCATTTTCGA
AGTGGTTTTGGATCTGGCTCTAACAATTGGGTTCTTCATATAGAGGGTGGAGGCTGGTGT
AATACTGTAGCATCTTGTTTAATTCGTAAAACAACTGCACTAGGTTCTTCAAACTACATG
GAACGTCAAGTTCGCTTTTCCGGAATTTTAAGCCATGACTCATCACAGAATCCTGATTTC
TTTGACTGGAATAAAGTCAAGCTGCGGTATTGTGATGGTGCTTCTTTTGCTGGAAACTCT
CAAAAGAATGAAACACAACTCTTCTTCAGAGGTCAGCGCATCTGGGAAGCAGTTATGGAT
GAACTCTTATCAATAGGACTGTCTAATGCTAAACAGGTTCTTCTTTCAGGGTGCTCTGCT
GGAGGATTGGCAACTCTCATACACTGTGATGACTTCCGGGGGATTTTGCCAAAGGATGCC
ACTGTCAAATGCCTTGCTGATGCAGGTTTTTTCCTTGATGAGAAAGATGTTACTGGAAAT
CGCAGAATAAGGTCTTTCTATAGTGATGTTGTCCACCTTCAGGGTGTAGCAAACAGTTTG
GATAAGGATTGTGTTGGAAGAATGGAACCATCCCAGTGTTTCTTTCCTCAAGAATTTATC
AAGAACATAAAAACCCCAGTTTTCCTTGTCAACCCAGCTTATGATTTTTGGCAGATTCAA
TATGTTTTGATACCAGCTGAATCAGATCCTTCTGGCAAATGGGCAAAATGCAGACTGAGC
ATTCAGAAGTGTAGTCCTGCCCAGATTGAAATTCTACATGGTTTCCGAAATTCTATGCTA
AAGACACTGAGTGAGTTCCAACAAAACAAGGATGGAGGCATGTTTATAAACTCTTGCTTT
AGTCACTGCCAAACATTGATGACTGAGACATGGCATTCTCCTTATTCTCCCAGGATCAAC
AATAAGACCATTGCAGAATCTGTAGGTGACTGGTACTTCAACCGAAAATTAGTGAAGCAA
ATTGATTGCCCTTATCCATGTAATCCTACTTGTTCTAACATGGACTTTACTTGGCATCGA
TGA