Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g00140.t01
CDS Infomation

cds chromosome:12X:8:14523202:14525710:-1 gene:VIT_08s0007g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGATTCACTTCTCACTGCCCTTTCAATGGAGAATCATCATCCATCCACACTCTTA
TCCATGGATTCAAGTGCTTCATCGCACGAAGACCTGGATTTAGAGATGAATCGACAAATC
ATACTTACTCGCCCACCCGATATTAATTTACCTCTGTCGGCAGAGCGCAGCCCGCCCCCA
CCGCCGTGGAATTCTGACCAGTGTGACATTTTAGAAGTGGGGCTTGCGCCTCAAATTTAT
GAGACTGAGAGCTTCCTTACTATCCCTAAGGCCGGTAGGAAATGTGCCAAACGGGTAGAT
TGCATATGGGGTGCTTGGTTTTTCTTCAGTTTCTACTTTAAGCCTGCTTTGAATGAGAAG
TCCAAGGCAAAGATTATTAGGGACAGCAATGGAGTGTCTGGGTTTGATAAATCCGATCTC
AAGCTTGAAGTTTTTATGGTTCAGCATGATATGGAGAACATGTACATGTGGGTTTTCAAG
GAAAGGCCTGAGAATGCATTGGGTAAGATGCAGCTGAGGAGTTACATGAATGGGCATTCT
CGCCAAGGAGAGCGGTTGTTTCCTTTTAGTGTTGATAAGGGGTTTGTTCGGTCTCATAGG
ATGCAACGCAAGCATTATAGGGGATTATCTAATCCTCAGTGTGTTCATGGGATCGAAGTT
GTTCCATCTCCAAATCTCATTGGTGTTGATGAAGAAGAGAGGAAAAGGTGGATGGAACTC
ACAGGCAGGGATATGAACTTTTCAATCCCACCTGAGGCTAGTGATTTCAGTTCATGGAGG
AACCTTCCCAACACAGACTTTGAGCTTGAAAGGCCACCTCCTCCGGTGAAGAGTAACTCG
AATTCCCATTCAAAGAAATTGTTGAATGGGTCTGGGCTGAATTTGTCAACACAGCCATCC
AACCACAGCAATGGTGATGGAATGGACTTATCACCTGTTAGCAGCAAGAGGAGGAAGGAC
TTCTTCCCGCACGGGAACGATGATGATTGTTATTTGGCTGTTAATCCTCCTTCTGATCGA
GTTCAAGATATGGAGATTCACCCGAATGAGCCACCCTGGTTGAATGATTTTAGTGGGGTT
ATGAGGAATGTTTATGGGCCTGTCACAGCTGCAAAAACAATTTATGAGGATGTAGAGGGT
TATTTGATCATTATCAGCTTGCCCTTTGTGGATCTTCAGAGGGTGAAAGTATCTTGGAGG
AATACTCTCACCCATGGTATCATAAAAGTGTCTTGTGTGAGCACATCTCGCAGGCCATTT
ATCAAGAGACATGACAGAACTTTCAAGCTTACAGATCCATCATCCGAGCATTGCCCTCCA
GGGGAGTTCATCAGAGAAATCCCACTCTCAACCCGAATTCCCGAAGATGCTAACATTGAA
GCATATTATGATGGGCCTGGAACAACGCTTGAGATTTTGGTGCCAAAACTCCGTGTGGGG
CCAGAAGAACATGAGGTTCGTGTTTGCCTTCGTCCTCACCTTGCTGCCAATGAGCTGATG
CTGACTTGA

Peptide Sequence

PEP ID

VIT_08s0007g00140.t01
PEP Infomation

pep chromosome:12X:8:14523202:14525710:-1 gene:VIT_08s0007g00140 transcript:VIT_08s0007g00140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGDSLLTALSMENHHPSTLLSMDSSASSHEDLDLEMNRQIILTRPPDINLPLSAERSPPP
PPWNSDQCDILEVGLAPQIYETESFLTIPKAGRKCAKRVDCIWGAWFFFSFYFKPALNEK
SKAKIIRDSNGVSGFDKSDLKLEVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHS
RQGERLFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLIGVDEEERKRWMEL
TGRDMNFSIPPEASDFSSWRNLPNTDFELERPPPPVKSNSNSHSKKLLNGSGLNLSTQPS
NHSNGDGMDLSPVSSKRRKDFFPHGNDDDCYLAVNPPSDRVQDMEIHPNEPPWLNDFSGV
MRNVYGPVTAAKTIYEDVEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRRPF
IKRHDRTFKLTDPSSEHCPPGEFIREIPLSTRIPEDANIEAYYDGPGTTLEILVPKLRVG
PEEHEVRVCLRPHLAANELMLT

Transcript Sequence

Transcript ID

VIT_08s0007g00140.t01
Transcript Infomation

cdna chromosome:12X:8:14523202:14525710:-1 gene:VIT_08s0007g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAGGCGATGGTGAAGATGAGGATTATTACGCCCTCTGCACATCCCTCCTCTTGGGGAT
TCCAACTAGCTTCTCCCAAAAGATATAGTCTTCCTTTAGCGTTTTCTTACGTCTCTTTCT
CTCTCTCCGTAGGTAGAGATTGAAGAGATTTTTTTCCCCTTATTTTATTTTTATTTTTTT
GTTTAGGGTTTTATCCACAAATTTATTTTTTTTCCTTTTTCTAATTAAGATAGGGTTGGA
TTTTTGTTGATTTTAATTTTCTCTATATATAGGTAAAAATCAAAGATATTTAATGATTTG
ACTTACAAATATCTCTCATCAAAGTTTTAGGTTATATTGGTCTGGTGATTTTGTGGGTCT
TGAATCTTGACTTGTTTATTTGATCTTAATGTGGGTGTGGGGGCATATTCAAATTTGATA
TAGAAAGCTAGGGTTTTGATGGAGTGGGGTTATTGTGGGGATTGATTTGAAGAAGTTGGT
TATATAGGTTGTTTTGTTGAATTCTTTTGGATGAAAATTCCAAACCCCCCAGAAATAGTA
ACCCCAATCACAAAGGAGATGAGGTGAAATGGGAGATTCACTTCTCACTGCCCTTTCAAT
GGAGAATCATCATCCATCCACACTCTTATCCATGGATTCAAGTGCTTCATCGCACGAAGA
CCTGGATTTAGAGATGAATCGACAAATCATACTTACTCGCCCACCCGATATTAATTTACC
TCTGTCGGCAGAGCGCAGCCCGCCCCCACCGCCGTGGAATTCTGACCAGTGTGACATTTT
AGAAGTGGGGCTTGCGCCTCAAATTTATGAGACTGAGAGCTTCCTTACTATCCCTAAGGC
CGGTAGGAAATGTGCCAAACGGGTAGATTGCATATGGGGTGCTTGGTTTTTCTTCAGTTT
CTACTTTAAGCCTGCTTTGAATGAGAAGTCCAAGGCAAAGATTATTAGGGACAGCAATGG
AGTGTCTGGGTTTGATAAATCCGATCTCAAGCTTGAAGTTTTTATGGTTCAGCATGATAT
GGAGAACATGTACATGTGGGTTTTCAAGGAAAGGCCTGAGAATGCATTGGGTAAGATGCA
GCTGAGGAGTTACATGAATGGGCATTCTCGCCAAGGAGAGCGGTTGTTTCCTTTTAGTGT
TGATAAGGGGTTTGTTCGGTCTCATAGGATGCAACGCAAGCATTATAGGGGATTATCTAA
TCCTCAGTGTGTTCATGGGATCGAAGTTGTTCCATCTCCAAATCTCATTGGTGTTGATGA
AGAAGAGAGGAAAAGGTGGATGGAACTCACAGGCAGGGATATGAACTTTTCAATCCCACC
TGAGGCTAGTGATTTCAGTTCATGGAGGAACCTTCCCAACACAGACTTTGAGCTTGAAAG
GCCACCTCCTCCGGTGAAGAGTAACTCGAATTCCCATTCAAAGAAATTGTTGAATGGGTC
TGGGCTGAATTTGTCAACACAGCCATCCAACCACAGCAATGGTGATGGAATGGACTTATC
ACCTGTTAGCAGCAAGAGGAGGAAGGACTTCTTCCCGCACGGGAACGATGATGATTGTTA
TTTGGCTGTTAATCCTCCTTCTGATCGAGTTCAAGATATGGAGATTCACCCGAATGAGCC
ACCCTGGTTGAATGATTTTAGTGGGGTTATGAGGAATGTTTATGGGCCTGTCACAGCTGC
AAAAACAATTTATGAGGATGTAGAGGGTTATTTGATCATTATCAGCTTGCCCTTTGTGGA
TCTTCAGAGGGTGAAAGTATCTTGGAGGAATACTCTCACCCATGGTATCATAAAAGTGTC
TTGTGTGAGCACATCTCGCAGGCCATTTATCAAGAGACATGACAGAACTTTCAAGCTTAC
AGATCCATCATCCGAGCATTGCCCTCCAGGGGAGTTCATCAGAGAAATCCCACTCTCAAC
CCGAATTCCCGAAGATGCTAACATTGAAGCATATTATGATGGGCCTGGAACAACGCTTGA
GATTTTGGTGCCAAAACTCCGTGTGGGGCCAGAAGAACATGAGGTTCGTGTTTGCCTTCG
TCCTCACCTTGCTGCCAATGAGCTGATGCTGACTTGAGGAAGGGGCATTAATTAGGAAAT
TGTACGGGTGGTGGTGCCAAGGTTGGTGCTTTTGTTTACTAACCTTGTATCGTACTATGT
AATCTATGAAATGAAATGTGTGTCTCACATTTTTATCTTACTGTAATTTTTGCTCAGCAA
TTGCTATGGTTTTTGCTCCCATGCATACACTTAGGTTTTTCCTGTAATGAATTTTTTTTT
TTTTTTGAACTTATTATTTATTCTACTGGCTTATGTTTAGCTGTTTTGAGTTCA