Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0191g00180.t01
CDS Infomation

cds chromosome:12X:7:14952241:14954822:-1 gene:VIT_07s0191g00180 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homodomain-leucine zipper protein ATHB-6-like protein [Source:UniProtKB/TrEMBL;Acc:F6HRP5]
Sequence

ATGAAGAGACTCGGAAGCTCGGAGTCCTTGGGTGCTTTGATGGCCATCTGCCCAACTACA
GATGAACACAGTCCCAGGAACAACCATGTCTACAGTAGGGAATTTCAGACCATGTTCGAT
GGCCTAGACGAAGAGGGCTGTGTGGAGGAATCCGGGCAGATCGTCGAGAAGAAACGGCGG
TTAAGCGTCGACCAAGTGAAGGCCTTGGAGAAGAATTTCGAGGTGGAAAATAAGCTTGAA
CCCGAGAGAAAGGTGAAGCTAGCCCAGGAGCTTGGGTTGCAGCCAAGGCAAGTAGCCGTT
TGGTTCCAAAACCGCCGGGCCCGGTGGAAGACCAAGCAATTGGAGAGAGACTATGGCATC
CTCAAGGCCAATTATGAAACTCTCAAGCTCAATTACGACGCCATCCAACACGACAATGAA
GCTCTACTCAAAGAGATAAGAGAGCTGAAATCAAAGCTGAACGAAGAGAAGACAGAGAGC
AATCTTTCAGTTAAAGAAGAGTTGGTGGTTTCAGAATCCGATGAGAAGGTGAAGGTGATG
GAACAAAGCGAAACAGCCATGGGTGCAGGCGTCGGTGGATCTGATGCCAAAGACTTGAGC
AACGACGATAGTTTCAAGGATGGCAACGGAGGAGGCAGAGTTTCAGTGTTCCCGGACATG
AAAGATGGCTCCTCCGATAGCGACTCCAGCGCCATCTTGAACGAAGACAACAGCCCCAAT
GCCGCCATATCTTCATCTGGGGTTCTTCAGAACAACCACCACCACCACCTTCTCATGTCG
CCGCCTTCCTCTTCCCTCAGGTTCAACAGCTCTTCCTCCTCCTCGATCAACTGCTTCCAC
TTCTCTGACTCCTCCAGACCCACTCTCGGGAATACCCAGAAAGCCTATCAACCCCAGTTC
GTGAAAATGGAGGAACACAATTTCTTCGGCGCAGACGAGTCCTGCAATTTCTTCTCGGAC
GATCAACCTCCCACCCTTCCTTGGTACTGCCCCGATCAGTGGACCTAA

Peptide Sequence

PEP ID

VIT_07s0191g00180.t01
PEP Infomation

pep chromosome:12X:7:14952241:14954822:-1 gene:VIT_07s0191g00180 transcript:VIT_07s0191g00180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homodomain-leucine zipper protein ATHB-6-like protein [Source:UniProtKB/TrEMBL;Acc:F6HRP5]
Sequence

MKRLGSSESLGALMAICPTTDEHSPRNNHVYSREFQTMFDGLDEEGCVEESGQIVEKKRR
LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGI
LKANYETLKLNYDAIQHDNEALLKEIRELKSKLNEEKTESNLSVKEELVVSESDEKVKVM
EQSETAMGAGVGGSDAKDLSNDDSFKDGNGGGRVSVFPDMKDGSSDSDSSAILNEDNSPN
AAISSSGVLQNNHHHHLLMSPPSSSLRFNSSSSSSINCFHFSDSSRPTLGNTQKAYQPQF
VKMEEHNFFGADESCNFFSDDQPPTLPWYCPDQWT

Transcript Sequence

Transcript ID

VIT_07s0191g00180.t01
Transcript Infomation

cdna chromosome:12X:7:14952241:14954822:-1 gene:VIT_07s0191g00180 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homodomain-leucine zipper protein ATHB-6-like protein [Source:UniProtKB/TrEMBL;Acc:F6HRP5]
Sequence

GGGTTGTGAGCTGGTTTACTGATCTTCCCGTTCCACTCCAATCCTCTTTCTCTCTCCTGT
TTTCTTTTGTAGATGAACAGTCGTAGACTATTTGCCTTCAAACATAGCTGTTTAAATTGA
TTGAGTAATGATGTAGAGTAGAGAGTGTGGGCTATATAGGGATAGAGTGGTGTGAGAGTT
TTTGGTTAGCTTCTCTTGTGGGTTGTGTTTTGATTGTAAGCTTCAAGTGCTTTGCTTGTG
GGGTTTGTTTTTGTGGGTTCTTCTTCTTTCTTTTTGATGGGTTCAGAGGGGGAGGAAGTA
CTGAAAAAGGAGAAAGATTGGGAAGCCAAGAGAGAGGGCTGGTTATACAAGGACGCTATT
TGTATACACCTCTACTATTCTAGTTGCGCTTGTGTTGGGCATGGGACTTCCTACTTTCAT
GGTTTCATTTAAGTGAAGAAAAAAAAAAGAATTGCAAAAGAAAAAAATTTGCTCTCAGCA
CGTCTGCCAAGAGCACTAAAGATTTCGGTTTAACGAAACAAACCCAAACATCTAAACAAG
ATCCAATTTAGATCTGTTTACAGTTTCTTGCCCTTCAGTTATGAAGAGACTCGGAAGCTC
GGAGTCCTTGGGTGCTTTGATGGCCATCTGCCCAACTACAGATGAACACAGTCCCAGGAA
CAACCATGTCTACAGTAGGGAATTTCAGACCATGTTCGATGGCCTAGACGAAGAGGGCTG
TGTGGAGGAATCCGGGCAGATCGTCGAGAAGAAACGGCGGTTAAGCGTCGACCAAGTGAA
GGCCTTGGAGAAGAATTTCGAGGTGGAAAATAAGCTTGAACCCGAGAGAAAGGTGAAGCT
AGCCCAGGAGCTTGGGTTGCAGCCAAGGCAAGTAGCCGTTTGGTTCCAAAACCGCCGGGC
CCGGTGGAAGACCAAGCAATTGGAGAGAGACTATGGCATCCTCAAGGCCAATTATGAAAC
TCTCAAGCTCAATTACGACGCCATCCAACACGACAATGAAGCTCTACTCAAAGAGATAAG
AGAGCTGAAATCAAAGCTGAACGAAGAGAAGACAGAGAGCAATCTTTCAGTTAAAGAAGA
GTTGGTGGTTTCAGAATCCGATGAGAAGGTGAAGGTGATGGAACAAAGCGAAACAGCCAT
GGGTGCAGGCGTCGGTGGATCTGATGCCAAAGACTTGAGCAACGACGATAGTTTCAAGGA
TGGCAACGGAGGAGGCAGAGTTTCAGTGTTCCCGGACATGAAAGATGGCTCCTCCGATAG
CGACTCCAGCGCCATCTTGAACGAAGACAACAGCCCCAATGCCGCCATATCTTCATCTGG
GGTTCTTCAGAACAACCACCACCACCACCTTCTCATGTCGCCGCCTTCCTCTTCCCTCAG
GTTCAACAGCTCTTCCTCCTCCTCGATCAACTGCTTCCACTTCTCTGACTCCTCCAGACC
CACTCTCGGGAATACCCAGAAAGCCTATCAACCCCAGTTCGTGAAAATGGAGGAACACAA
TTTCTTCGGCGCAGACGAGTCCTGCAATTTCTTCTCGGACGATCAACCTCCCACCCTTCC
TTGGTACTGCCCCGATCAGTGGACCTAAACTACTTGATCACTTGATGAAGAAGAGGCAAA
TCCAAATAAGAATCCAAAAAATGCTCCAAGAAATTTTGTAAAATTGTAAAATGGAAGTGA
TGATGGAGTATGTAATTAAGTAGCTTTTCCTCGCCATTGTAGCAAAGTGAACAAGTTGCA
GAGAGAAGGTCGAGATGGAAGGGCAGAGAGGAGAGACACACGTGGGGGTGGTTTAGGGCG
AAAGGTGACGGCTATGGTGCTGGTCGTGGGGGTGGGGGAAGGTGGTGTTTCTGTGAGCCA
TTGCGGGAATGATTAGGTCGTAATTGAAGTCTCCCTGCAGCTAATGTAAAAACAATCCGA
ATAATATTCCTAGGGAGGAGAATAATATGAAAATCCATGGAGGAACAATCCTGTAATGGT
GAAATAATCATTGCCTTGCTTTTCATC