Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0185g00050.t01
CDS Infomation

cds chromosome:12X:7:14082715:14084070:-1 gene:VIT_07s0185g00050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:D7TR85]
Sequence

ATGGCTTCTCTGCTAGCGCTGCTGCTGGCATTTCTCCTACTTGGTGCAGTGGTTGGTACA
AAAATGAGTGACATTACCTTTGATCAAAGCTACAGAATTACATGGGGAAATGACCATGTC
TTGTCTTTAAACCAAGGAAGACTAGTTCAGCTCTCATTGGACCAATCCTCAGGGGCTGGG
TTTGCATCCAAGCAAAGCTATGGTTCTGGATTCTTTCATATGAGGATAAAACTACCACCC
AAGGACTCTGCTGGAGTTGTTACAGCTTACTATTTGACTTCACACACCAAAAACCATGAT
GAGCTAGATTTCGAGTTCTTGGGAAACAAAGAAGGGAAGCCTTACACACTACAAACTAAC
GTATTCTCCAATGGGCAAGGAGATAGAGAACAAAGGATTCTTCTCTGGTTCGATCCCACT
GCAGACTTCCATTCTTATAAAATTCTTTGGAACCAACACCAGATTGTATTTTATGTGGAT
GATATCCCCATTAGAGTGTTCAAGAACAACTCAAATATTGGAGTAGACTACCCATCACAG
CCAATGCAGATTGAAGGAAGCTTGTGGAATGGAGAAAGTTGGGCAACAGATGGAGGCCAA
ACAAAGACTAATTGGAGCTGCGCACCATTCAGAACCCACTTCCAAGGATTCAGGATCGAT
GGTTGCCCTTCTGACTACTCCAACTGTCACTCTTCTAACTTGTGGTGGAATCAAAAGAAA
TTTTGGAAACTAGACTCCACTCAACAAAAGGCACATGAGAATGTGAGAAACAAGTACATG
AACTATGACTATTGTTCTGATACCAATAGGTTTGCTGTGCGTCCCAAAGAGTGCACTCAG
TAA

Peptide Sequence

PEP ID

VIT_07s0185g00050.t01
PEP Infomation

pep chromosome:12X:7:14082715:14084070:-1 gene:VIT_07s0185g00050 transcript:VIT_07s0185g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:D7TR85]
Sequence

MASLLALLLAFLLLGAVVGTKMSDITFDQSYRITWGNDHVLSLNQGRLVQLSLDQSSGAG
FASKQSYGSGFFHMRIKLPPKDSAGVVTAYYLTSHTKNHDELDFEFLGNKEGKPYTLQTN
VFSNGQGDREQRILLWFDPTADFHSYKILWNQHQIVFYVDDIPIRVFKNNSNIGVDYPSQ
PMQIEGSLWNGESWATDGGQTKTNWSCAPFRTHFQGFRIDGCPSDYSNCHSSNLWWNQKK
FWKLDSTQQKAHENVRNKYMNYDYCSDTNRFAVRPKECTQ

Transcript Sequence

Transcript ID

VIT_07s0185g00050.t01
Transcript Infomation

cdna chromosome:12X:7:14082715:14084070:-1 gene:VIT_07s0185g00050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:D7TR85]
Sequence

ATGGCTTCTCTGCTAGCGCTGCTGCTGGCATTTCTCCTACTTGGTGCAGTGGTTGGTACA
AAAATGAGTGACATTACCTTTGATCAAAGCTACAGAATTACATGGGGAAATGACCATGTC
TTGTCTTTAAACCAAGGAAGACTAGTTCAGCTCTCATTGGACCAATCCTCAGGGGCTGGG
TTTGCATCCAAGCAAAGCTATGGTTCTGGATTCTTTCATATGAGGATAAAACTACCACCC
AAGGACTCTGCTGGAGTTGTTACAGCTTACTATTTGACTTCACACACCAAAAACCATGAT
GAGCTAGATTTCGAGTTCTTGGGAAACAAAGAAGGGAAGCCTTACACACTACAAACTAAC
GTATTCTCCAATGGGCAAGGAGATAGAGAACAAAGGATTCTTCTCTGGTTCGATCCCACT
GCAGACTTCCATTCTTATAAAATTCTTTGGAACCAACACCAGATTGTATTTTATGTGGAT
GATATCCCCATTAGAGTGTTCAAGAACAACTCAAATATTGGAGTAGACTACCCATCACAG
CCAATGCAGATTGAAGGAAGCTTGTGGAATGGAGAAAGTTGGGCAACAGATGGAGGCCAA
ACAAAGACTAATTGGAGCTGCGCACCATTCAGAACCCACTTCCAAGGATTCAGGATCGAT
GGTTGCCCTTCTGACTACTCCAACTGTCACTCTTCTAACTTGTGGTGGAATCAAAAGAAA
TTTTGGAAACTAGACTCCACTCAACAAAAGGCACATGAGAATGTGAGAAACAAGTACATG
AACTATGACTATTGTTCTGATACCAATAGGTTTGCTGTGCGTCCCAAAGAGTGCACTCAG
TAATTGCATTTCGTACATCAGCTGCCATTTCCGCAGGAAACTGAAGATTCTTAATTAAAG
ACATTGATGAAACAATTATATTGTGTTCGAATTCCTATATATATTAAGTAATGATAATTG
ATTAGCTTCTTGTTTCTGCCTTTGA