Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0141g00890.t01
CDS Infomation

cds chromosome:12X:7:517619:519409:1 gene:VIT_07s0141g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTGAGTTTAGCCTCCTACTTTCTCCATTTCTCTTCATTCTTCCACTACTTTTCTTC
TTCTTCTTCATTCGCACAAAATCATCTTCATCTCCTTCCGCCAGTGCCCTCAGATGTTAC
CCAATAATTGGCTCATCTCTGGAAATCTTAGCCAATCTAAACCGACGTGTCCAGTGGACA
TCTGATCTTATTAGAGCCTCACCCTCTGCAACTGTAGTCATCCACCGCTGTCTGGGCACA
CGTGTTGTCCTCACTGGCAACCCCTCCAATGTCCAGCACATCCTCAAGACCCACTTCCAC
AACTACCATAAAGGCCAGTTCTTTAGAATCATCCTCTCTGATTTTCTTGGTGGCGGCATC
TTCAATGCCGACGGCGACAACTGGAAGTTCCAGAGACAGGTCTCCAGCCATGAATTCAAC
ACAAAATCCCTGCGCAAATTCATTGAGACTGTCGTCGATGCTGAGCTCTCCGACCGCCTC
ATCCCTATTTTAAGCACTGCTGCCGCCAACAACTCGGTTCTGGACTTTCAAGATATTCTC
CAGAGATTCGCTTTCGATAACATCTGCAAGATCGCTTTCGGGTACGATCCAGATTATCTA
TTGCCATCTCTCCCACAGGCAAAATTCGCAGTTGCTTTCGAGGATGCAGCTCGAATTAGC
AGCGAGAGGTTCACTTTGATTCTCCCAATTGTGTGGAAACTGAAACGGCTTATGGGAGTA
GGGTCGGAGAAGCGCCTGAAGCTTGCAGTGGCTGAGGTGCGTGAGTTTGCAAAAAACATC
GTAAGAGAGAAGAAAGAAGAGCTGAAGCACAAATCTTCACTCGACTCCACCGACCTCTTA
TCAAGATTCTTGAGCTCCGGCCACTCAGATGAGGACTTTATCACTGATATAGTCATCAGC
TTTATACTCGCCGGTCGGGACACCACCTCCGCTGCTTTGACATGGTTCTTCTGGTTACTC
TTCAAGCACCCAGATGTGGAAGATCAGATTCTAAATGAAATCAATGAAAAGTCTGAATTG
CCGGTGTTCGATGAAGTGAAGGACATGGTCTACACACACGCCTCTCTCTGTGAGAGTATG
CGATTCTACCCTCCTGTCCCCGTCGACAGCAAAGAGGTGGTGAGCGACGACGTGTTGCCG
GACGGCACTGTGGTGAAGAAGGGCATGAGGGTGACCTATCATCCCTACGCAATGGGAAGG
TTGGAGGAGCTGTGGGGGTCGGACTGGCCGGAGTTCCGACCAGAGAGGTGGCTGCAGAGA
GACCCAGACACCGAAAAATGGAGCTTTGTGGCCAGGGATCCATACACGTATCCGGTGTTT
CAGGCCGGACCCAGAATTTGCCTGGGAAAGGAGATGGCGTTTCTGCAGATGAAGAGGGTG
GTCGCCGGAGTCCTGCGACGATTCCAGGTGGTGCCGGTGGTGGAGGACGGTGGCGAGCCG
GTCTACACCGCCGACTTAGCTGCCAAAATGAAAGGTGGTTTTCTGGTTAGGATTGTGGAA
AGGGCTGATAGAGGGTGA

Peptide Sequence

PEP ID

VIT_07s0141g00890.t01
PEP Infomation

pep chromosome:12X:7:517619:519409:1 gene:VIT_07s0141g00890 transcript:VIT_07s0141g00890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFEFSLLLSPFLFILPLLFFFFFIRTKSSSSPSASALRCYPIIGSSLEILANLNRRVQWT
SDLIRASPSATVVIHRCLGTRVVLTGNPSNVQHILKTHFHNYHKGQFFRIILSDFLGGGI
FNADGDNWKFQRQVSSHEFNTKSLRKFIETVVDAELSDRLIPILSTAAANNSVLDFQDIL
QRFAFDNICKIAFGYDPDYLLPSLPQAKFAVAFEDAARISSERFTLILPIVWKLKRLMGV
GSEKRLKLAVAEVREFAKNIVREKKEELKHKSSLDSTDLLSRFLSSGHSDEDFITDIVIS
FILAGRDTTSAALTWFFWLLFKHPDVEDQILNEINEKSELPVFDEVKDMVYTHASLCESM
RFYPPVPVDSKEVVSDDVLPDGTVVKKGMRVTYHPYAMGRLEELWGSDWPEFRPERWLQR
DPDTEKWSFVARDPYTYPVFQAGPRICLGKEMAFLQMKRVVAGVLRRFQVVPVVEDGGEP
VYTADLAAKMKGGFLVRIVERADRG

Transcript Sequence

Transcript ID

VIT_07s0141g00890.t01
Transcript Infomation

cdna chromosome:12X:7:517619:519409:1 gene:VIT_07s0141g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTATTTTTGTCTACAAATTCAATTCACTAGTCTACAGAGAAACACACGAGCCACCAATCA
CCATCAAGCATGTTTGAGTTTAGCCTCCTACTTTCTCCATTTCTCTTCATTCTTCCACTA
CTTTTCTTCTTCTTCTTCATTCGCACAAAATCATCTTCATCTCCTTCCGCCAGTGCCCTC
AGATGTTACCCAATAATTGGCTCATCTCTGGAAATCTTAGCCAATCTAAACCGACGTGTC
CAGTGGACATCTGATCTTATTAGAGCCTCACCCTCTGCAACTGTAGTCATCCACCGCTGT
CTGGGCACACGTGTTGTCCTCACTGGCAACCCCTCCAATGTCCAGCACATCCTCAAGACC
CACTTCCACAACTACCATAAAGGCCAGTTCTTTAGAATCATCCTCTCTGATTTTCTTGGT
GGCGGCATCTTCAATGCCGACGGCGACAACTGGAAGTTCCAGAGACAGGTCTCCAGCCAT
GAATTCAACACAAAATCCCTGCGCAAATTCATTGAGACTGTCGTCGATGCTGAGCTCTCC
GACCGCCTCATCCCTATTTTAAGCACTGCTGCCGCCAACAACTCGGTTCTGGACTTTCAA
GATATTCTCCAGAGATTCGCTTTCGATAACATCTGCAAGATCGCTTTCGGGTACGATCCA
GATTATCTATTGCCATCTCTCCCACAGGCAAAATTCGCAGTTGCTTTCGAGGATGCAGCT
CGAATTAGCAGCGAGAGGTTCACTTTGATTCTCCCAATTGTGTGGAAACTGAAACGGCTT
ATGGGAGTAGGGTCGGAGAAGCGCCTGAAGCTTGCAGTGGCTGAGGTGCGTGAGTTTGCA
AAAAACATCGTAAGAGAGAAGAAAGAAGAGCTGAAGCACAAATCTTCACTCGACTCCACC
GACCTCTTATCAAGATTCTTGAGCTCCGGCCACTCAGATGAGGACTTTATCACTGATATA
GTCATCAGCTTTATACTCGCCGGTCGGGACACCACCTCCGCTGCTTTGACATGGTTCTTC
TGGTTACTCTTCAAGCACCCAGATGTGGAAGATCAGATTCTAAATGAAATCAATGAAAAG
TCTGAATTGCCGGTGTTCGATGAAGTGAAGGACATGGTCTACACACACGCCTCTCTCTGT
GAGAGTATGCGATTCTACCCTCCTGTCCCCGTCGACAGCAAAGAGGTGGTGAGCGACGAC
GTGTTGCCGGACGGCACTGTGGTGAAGAAGGGCATGAGGGTGACCTATCATCCCTACGCA
ATGGGAAGGTTGGAGGAGCTGTGGGGGTCGGACTGGCCGGAGTTCCGACCAGAGAGGTGG
CTGCAGAGAGACCCAGACACCGAAAAATGGAGCTTTGTGGCCAGGGATCCATACACGTAT
CCGGTGTTTCAGGCCGGACCCAGAATTTGCCTGGGAAAGGAGATGGCGTTTCTGCAGATG
AAGAGGGTGGTCGCCGGAGTCCTGCGACGATTCCAGGTGGTGCCGGTGGTGGAGGACGGT
GGCGAGCCGGTCTACACCGCCGACTTAGCTGCCAAAATGAAAGGTGGTTTTCTGGTTAGG
ATTGTGGAAAGGGCTGATAGAGGGTGATGTCTATCTGCGCATGTCCGTGTGATCTTATGA
ACGTTTGATTGCTTTTGTTTTTTTGTGTCTTTTGTGTCTTTTTATTATTATTATTATGTA
CCAATAAAGATGTTAGGGATCCCATATCCATGCATTTTGGAGTAGGTTCAAATCTACAAA
AGAACAATTGTATTTGGACTTTTGAAATATGATTATGGCATTAAATATGAG