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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0141g00090.t01
CDS Infomation

cds chromosome:12X:7:53787:55529:1 gene:VIT_07s0141g00090 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6GXK9]
Sequence

ATGGCAAACCCTTGTCGGAAAGTCTACTTACTAGACTTCGCATGCTACAAACCAGCCAAC
TCTTTACAATGCACCAAAGAAATGTTCTTGGAGCGGTGCAGACGAGTCGGGAACTTCTCC
GAGGACAGCCTGGATTTCATTAAAAAAACGTTAGAGCGATCGGGACTGGGCGAATCCACA
TACTTACCTGAGGGATTGATGAGGTTTTACCCTCCGAATACCTGCATGGAAGAGGCGAGA
AAAGAGGCCGAGATGGTGATGTTCGGAGCTGTGGACGAGTTACTAGCCAAGACTGGACTG
AAGGGTAAGGAGATAGGGATAGTGGTGGTGAATTGCACTATCTTTAACCCGGTGCCATCT
CTCTCTTCCATGATTGTGAATAGATACAAGCTTGGTGAGAATGTTTTGAGCTACAATCTT
GGTGGGATGGGTTGCAGCGGCGGAGTCAGAGCCATATCCCTTGCCAAACACCTCCTTCAG
GTGCACCATAACTCCTATGCACTAGTGCTGAGTACAGAGAACATCACCCCAAATTGCTAC
ATGGGCCATGATCGATCCAAGATTCTTATCAACTGCCTGTTCCGTGTGGGCGCGGCCGCC
ATCCTCCTCTCCAACCGGCCTTCCGACCGCCGCTGCTCAAAGTACCAGCTCATCCACACC
GTCGACACCCACACGGCAAGCTCCGACCGTTCCTACAACTGCATATTCCAAGAAGAGGAC
CATGAAGGCCACATGGGCGTCACCGTCAGCAAAGATCTCCTGGCCGTCGCCACCATAGCC
ATCAACTCCAACTTAGCCGCACTGGGCCGCCTGATCCTCCCGGCATCGGAAAAGCTCCGA
TTTCTTGCAAACTACATAATCCGATACTTCCACGTGGCAAACATCGAGCCGTACGTGCCA
AATTTCAAGAGCGCGTTTGATCACTTTCTTCCCCATCCTGGTGGGAAGCCTGTACTGGAC
GAAGTGGAGAGAAACCTGAAAATAAGTGAGACCCAAATGGAAGCATCTAGAATGACACTG
TATAGATTTGGAAATGTCTCCAGTAGTACAGTGTGGTATGAGCTAGCCTACACCGAGGCC
AAGGGTAGGGTTAAGAGGGGTGATCGTGTGTGGCAGATTGCATTTGGGTCGGGGTTCAAG
TGCACTAGTCTCATCTGGAAGGCGATGAGGACCGTTGATAGTCGGGAAAAAATGAATCCT
TGGAGCGATGAGATTGATGAGTTTCCAGTGGTGCAGCCGCAGAGCACAGGATCATTCTCC
TTCTTTTTTGAGTCGTTCGAACCAACATGA

Peptide Sequence

PEP ID

VIT_07s0141g00090.t01
PEP Infomation

pep chromosome:12X:7:53787:55529:1 gene:VIT_07s0141g00090 transcript:VIT_07s0141g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6GXK9]
Sequence

MANPCRKVYLLDFACYKPANSLQCTKEMFLERCRRVGNFSEDSLDFIKKTLERSGLGEST
YLPEGLMRFYPPNTCMEEARKEAEMVMFGAVDELLAKTGLKGKEIGIVVVNCTIFNPVPS
LSSMIVNRYKLGENVLSYNLGGMGCSGGVRAISLAKHLLQVHHNSYALVLSTENITPNCY
MGHDRSKILINCLFRVGAAAILLSNRPSDRRCSKYQLIHTVDTHTASSDRSYNCIFQEED
HEGHMGVTVSKDLLAVATIAINSNLAALGRLILPASEKLRFLANYIIRYFHVANIEPYVP
NFKSAFDHFLPHPGGKPVLDEVERNLKISETQMEASRMTLYRFGNVSSSTVWYELAYTEA
KGRVKRGDRVWQIAFGSGFKCTSLIWKAMRTVDSREKMNPWSDEIDEFPVVQPQSTGSFS
FFFESFEPT

Transcript Sequence

Transcript ID

VIT_07s0141g00090.t01
Transcript Infomation

cdna chromosome:12X:7:53787:55529:1 gene:VIT_07s0141g00090 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6GXK9]
Sequence

CTCAAGTTTCAGCCTTCTCTTTCAAAAACTCTCCAAAAAAAGCCCCTCTAATATGATTTC
CCACGCCATATTTGTCCTCAGCTTCATGGAAAACCATCTGTTAATGCTCCTAACAAACCA
CCCGAAGCTTAATTTCATGCTCCAAGTAACACTGTGCCTAACCCTAATGGCCTTCATGTT
AAACCTTTTCATGGCAAACCCTTGTCGGAAAGTCTACTTACTAGACTTCGCATGCTACAA
ACCAGCCAACTCTTTACAATGCACCAAAGAAATGTTCTTGGAGCGGTGCAGACGAGTCGG
GAACTTCTCCGAGGACAGCCTGGATTTCATTAAAAAAACGTTAGAGCGATCGGGACTGGG
CGAATCCACATACTTACCTGAGGGATTGATGAGGTTTTACCCTCCGAATACCTGCATGGA
AGAGGCGAGAAAAGAGGCCGAGATGGTGATGTTCGGAGCTGTGGACGAGTTACTAGCCAA
GACTGGACTGAAGGGTAAGGAGATAGGGATAGTGGTGGTGAATTGCACTATCTTTAACCC
GGTGCCATCTCTCTCTTCCATGATTGTGAATAGATACAAGCTTGGTGAGAATGTTTTGAG
CTACAATCTTGGTGGGATGGGTTGCAGCGGCGGAGTCAGAGCCATATCCCTTGCCAAACA
CCTCCTTCAGGTGCACCATAACTCCTATGCACTAGTGCTGAGTACAGAGAACATCACCCC
AAATTGCTACATGGGCCATGATCGATCCAAGATTCTTATCAACTGCCTGTTCCGTGTGGG
CGCGGCCGCCATCCTCCTCTCCAACCGGCCTTCCGACCGCCGCTGCTCAAAGTACCAGCT
CATCCACACCGTCGACACCCACACGGCAAGCTCCGACCGTTCCTACAACTGCATATTCCA
AGAAGAGGACCATGAAGGCCACATGGGCGTCACCGTCAGCAAAGATCTCCTGGCCGTCGC
CACCATAGCCATCAACTCCAACTTAGCCGCACTGGGCCGCCTGATCCTCCCGGCATCGGA
AAAGCTCCGATTTCTTGCAAACTACATAATCCGATACTTCCACGTGGCAAACATCGAGCC
GTACGTGCCAAATTTCAAGAGCGCGTTTGATCACTTTCTTCCCCATCCTGGTGGGAAGCC
TGTACTGGACGAAGTGGAGAGAAACCTGAAAATAAGTGAGACCCAAATGGAAGCATCTAG
AATGACACTGTATAGATTTGGAAATGTCTCCAGTAGTACAGTGTGGTATGAGCTAGCCTA
CACCGAGGCCAAGGGTAGGGTTAAGAGGGGTGATCGTGTGTGGCAGATTGCATTTGGGTC
GGGGTTCAAGTGCACTAGTCTCATCTGGAAGGCGATGAGGACCGTTGATAGTCGGGAAAA
AATGAATCCTTGGAGCGATGAGATTGATGAGTTTCCAGTGGTGCAGCCGCAGAGCACAGG
ATCATTCTCCTTCTTTTTTGAGTCGTTCGAACCAACATGATTGTGATGATCATGATCTGT
TGTAAACTCGTAATGGGTGCTGTTTGATCAAGCCGTTCCTTTTTTCTTTTTCTTTTTTTT
CTTTTTCTTTTTAATTTTCGTATTTGTACTAGGTTTTATGTCTTATTTATAATTTATATT
TTTAGCTTTATTTAAAAATT