Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0130g00060.t01
CDS Infomation

cds chromosome:12X:7:20203005:20205367:-1 gene:VIT_07s0130g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTAGCATTTCAGCTTCAAGCAAGTTTGTTCCTTCTTCAAAAAGAGTGTTCAAGGGC
TTAAAGGACTATGCACGTAGAATTGTCGACCTTGAATTATTTACACAAAGTCTTGAAGAC
TGGGTTGTTGAAAATTCTAGTGCAGATTCTAACAGTAGGGAGCAGTCTTTCAGGTCTCCC
TTTTCAATTGATGAATTGTGCAAGCTTGATTTCGCATTGGAGGGTGTCTTATTTCAGCAA
CTTTTTCGTATGCCTTGTTCACCTTATACTTCTGATGATCTGAAAGAAGATGAGTATCTT
GCTCTAGAAGACTTCCTCCATGCCATGATGGATGGTTTGTGGCGTACATTCTGGCATAAA
AATGGACCATTGCCATTCTTTGTAGCTTGTCCCCGTCATCCTGGATCCAAGTTCTATTCT
GTAGAAAAAGCAATATCGAGGGGAAGGCTCGGAGGGCTTTGTGGTGCAGCTTTGATATCA
AAAACTGGGAGAGATCTACAAATTCACTGGGATCAGGTGGTGGAGTTTGCATTATTTAAA
CCAGATATAATGGTGGGAAATGAGTTGGGATTTTCTTCTAACACAATCTGTGAAGCCCTG
TTTTATGGTTTTCATATTCTTCTTTCTAGGTGTTTGAGCAAGTACAGTTTGGTTAACAGT
GATTCCGTTTTTCTTCTAGTTGTTGATTCTAAATTTGGCGGGGTGGTGAAATTTGGGGGC
AACCTTAGCAAACTTGAACTTAATACTACTAACCCATACCAGTCTGTGGCAGAATGGATC
AAACTTCATGCTGAAGTCAGTGTTTCCCCTGTGGACAGAATATGGAACAAGCTAGGCAAT
GCAAATTGGGGGGACCAAGGAACTCTGCAACTGCTTTTGGCAACATTCTACTCCATTGTC
CAGTGGAATGGACCACCAAGAAAGTCGATTGCCTCCCTTGCCTCAGATCACGGCCTCCGT
CTTCAAAAACGGAGGATAGAATGCCGCCTCATTGAGAATGAGAACATGCTAGTCTCTTTC
GAACAGGCCAGCCATCAACAAGGAGAAATAGTTGAACTGGACGACAATGAAAGTCCATCT
TTCAGAAAGCAAGCATCGCGTTTGAAGCTTAAGCAGGGTGAGATATTGCTATTGGATGAT
CAGCGGCAGGGGCAGAAAAGTTTCCAGATTCAGGAGTCTCTTGTAGGAGGGAACTGCTTG
TCCTACAGTGCTGTTTCTCTAGAATACCCAACAGAGTTGTTGACTTTATACGTGGGTGCT
CATCCATCTCGACTGGAGCCATCCTGGGAGGATATGAGTCTCTGGTACCAGGTACAAAGG
CAAACCAAAGTACTAAACATCTTGAAGCAGCAGGGAATTTCAAGCAAATATTTGCCAGAA
ATAATTGCCTCTGGCAGAATCTTGCATTCTGGTCCTTGTAAAAAGCAGAGCCCAGGTGGG
CGATGTGATCATCCCTGGTGTGGAACCCCAATACTTGTGACAACTCCAATTGGAGAGCCC
CTTTCATCTATAGTTGCTCGGGATGGCCCATTTTCAAGCGAGGATGCAATCCGCTGCTGC
AGAGACTGCCTAGCTGCTCTGAGAAGTGCAAAAATGGCATCTATTCAGCATGGGGATATC
TGTCCTGAGAACATCATCCGTGTTTTAGACACACAAGGTGCAAGAAGCAGTTTCTTCTAC
GTTCCAGTCTCATGGGGCCGTGCAGTTCTTGAAGACAGAGATAGCCCAGCGATGAACTTG
CAGTTCTCGTCTTCTCATGCACTTCAGCATGGTAAGCTTTGCCCAGCATCTGATGCTGAG
AGCCTCGTCTACCTCCTCTACTTTGTTTGTGGTGGAACAATGCAGCAACAGGACTCCATT
GAATCTGCACTGCAATGGAGGCAGAGATGCTGGACCAAGCGCTCGATCCAGCAGCAACTT
GGTGAGGTTTCAGCTCTCCTGAAGGCATTTGCTGACTATGTGGACAGCCTCTGTGGCACC
CCATACCCAGTGGACTATGACATTTGGCTGAAGAGACTGAACAGGGCTGTGGATGGCTCA
GGAGACAGGGGGAAGCAGATTGAAGAATTCCCTGCCAATGTGAGAGTAGAGGATGTTGCT
GAATCCTCAGGAACTTCTGGGGGTGGGACTTCATATTCCTGCTGA

Peptide Sequence

PEP ID

VIT_07s0130g00060.t01
PEP Infomation

pep chromosome:12X:7:20203005:20205367:-1 gene:VIT_07s0130g00060 transcript:VIT_07s0130g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSISASSKFVPSSKRVFKGLKDYARRIVDLELFTQSLEDWVVENSSADSNSREQSFRSP
FSIDELCKLDFALEGVLFQQLFRMPCSPYTSDDLKEDEYLALEDFLHAMMDGLWRTFWHK
NGPLPFFVACPRHPGSKFYSVEKAISRGRLGGLCGAALISKTGRDLQIHWDQVVEFALFK
PDIMVGNELGFSSNTICEALFYGFHILLSRCLSKYSLVNSDSVFLLVVDSKFGGVVKFGG
NLSKLELNTTNPYQSVAEWIKLHAEVSVSPVDRIWNKLGNANWGDQGTLQLLLATFYSIV
QWNGPPRKSIASLASDHGLRLQKRRIECRLIENENMLVSFEQASHQQGEIVELDDNESPS
FRKQASRLKLKQGEILLLDDQRQGQKSFQIQESLVGGNCLSYSAVSLEYPTELLTLYVGA
HPSRLEPSWEDMSLWYQVQRQTKVLNILKQQGISSKYLPEIIASGRILHSGPCKKQSPGG
RCDHPWCGTPILVTTPIGEPLSSIVARDGPFSSEDAIRCCRDCLAALRSAKMASIQHGDI
CPENIIRVLDTQGARSSFFYVPVSWGRAVLEDRDSPAMNLQFSSSHALQHGKLCPASDAE
SLVYLLYFVCGGTMQQQDSIESALQWRQRCWTKRSIQQQLGEVSALLKAFADYVDSLCGT
PYPVDYDIWLKRLNRAVDGSGDRGKQIEEFPANVRVEDVAESSGTSGGGTSYSC

Transcript Sequence

Transcript ID

VIT_07s0130g00060.t01
Transcript Infomation

cdna chromosome:12X:7:20203005:20205367:-1 gene:VIT_07s0130g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTAGCATTTCAGCTTCAAGCAAGTTTGTTCCTTCTTCAAAAAGAGTGTTCAAGGGC
TTAAAGGACTATGCACGTAGAATTGTCGACCTTGAATTATTTACACAAAGTCTTGAAGAC
TGGGTTGTTGAAAATTCTAGTGCAGATTCTAACAGTAGGGAGCAGTCTTTCAGGTCTCCC
TTTTCAATTGATGAATTGTGCAAGCTTGATTTCGCATTGGAGGGTGTCTTATTTCAGCAA
CTTTTTCGTATGCCTTGTTCACCTTATACTTCTGATGATCTGAAAGAAGATGAGTATCTT
GCTCTAGAAGACTTCCTCCATGCCATGATGGATGGTTTGTGGCGTACATTCTGGCATAAA
AATGGACCATTGCCATTCTTTGTAGCTTGTCCCCGTCATCCTGGATCCAAGTTCTATTCT
GTAGAAAAAGCAATATCGAGGGGAAGGCTCGGAGGGCTTTGTGGTGCAGCTTTGATATCA
AAAACTGGGAGAGATCTACAAATTCACTGGGATCAGGTGGTGGAGTTTGCATTATTTAAA
CCAGATATAATGGTGGGAAATGAGTTGGGATTTTCTTCTAACACAATCTGTGAAGCCCTG
TTTTATGGTTTTCATATTCTTCTTTCTAGGTGTTTGAGCAAGTACAGTTTGGTTAACAGT
GATTCCGTTTTTCTTCTAGTTGTTGATTCTAAATTTGGCGGGGTGGTGAAATTTGGGGGC
AACCTTAGCAAACTTGAACTTAATACTACTAACCCATACCAGTCTGTGGCAGAATGGATC
AAACTTCATGCTGAAGTCAGTGTTTCCCCTGTGGACAGAATATGGAACAAGCTAGGCAAT
GCAAATTGGGGGGACCAAGGAACTCTGCAACTGCTTTTGGCAACATTCTACTCCATTGTC
CAGTGGAATGGACCACCAAGAAAGTCGATTGCCTCCCTTGCCTCAGATCACGGCCTCCGT
CTTCAAAAACGGAGGATAGAATGCCGCCTCATTGAGAATGAGAACATGCTAGTCTCTTTC
GAACAGGCCAGCCATCAACAAGGAGAAATAGTTGAACTGGACGACAATGAAAGTCCATCT
TTCAGAAAGCAAGCATCGCGTTTGAAGCTTAAGCAGGGTGAGATATTGCTATTGGATGAT
CAGCGGCAGGGGCAGAAAAGTTTCCAGATTCAGGAGTCTCTTGTAGGAGGGAACTGCTTG
TCCTACAGTGCTGTTTCTCTAGAATACCCAACAGAGTTGTTGACTTTATACGTGGGTGCT
CATCCATCTCGACTGGAGCCATCCTGGGAGGATATGAGTCTCTGGTACCAGGTACAAAGG
CAAACCAAAGTACTAAACATCTTGAAGCAGCAGGGAATTTCAAGCAAATATTTGCCAGAA
ATAATTGCCTCTGGCAGAATCTTGCATTCTGGTCCTTGTAAAAAGCAGAGCCCAGGTGGG
CGATGTGATCATCCCTGGTGTGGAACCCCAATACTTGTGACAACTCCAATTGGAGAGCCC
CTTTCATCTATAGTTGCTCGGGATGGCCCATTTTCAAGCGAGGATGCAATCCGCTGCTGC
AGAGACTGCCTAGCTGCTCTGAGAAGTGCAAAAATGGCATCTATTCAGCATGGGGATATC
TGTCCTGAGAACATCATCCGTGTTTTAGACACACAAGGTGCAAGAAGCAGTTTCTTCTAC
GTTCCAGTCTCATGGGGCCGTGCAGTTCTTGAAGACAGAGATAGCCCAGCGATGAACTTG
CAGTTCTCGTCTTCTCATGCACTTCAGCATGGTAAGCTTTGCCCAGCATCTGATGCTGAG
AGCCTCGTCTACCTCCTCTACTTTGTTTGTGGTGGAACAATGCAGCAACAGGACTCCATT
GAATCTGCACTGCAATGGAGGCAGAGATGCTGGACCAAGCGCTCGATCCAGCAGCAACTT
GGTGAGGTTTCAGCTCTCCTGAAGGCATTTGCTGACTATGTGGACAGCCTCTGTGGCACC
CCATACCCAGTGGACTATGACATTTGGCTGAAGAGACTGAACAGGGCTGTGGATGGCTCA
GGAGACAGGGGGAAGCAGATTGAAGAATTCCCTGCCAATGTGAGAGTAGAGGATGTTGCT
GAATCCTCAGGAACTTCTGGGGGTGGGACTTCATATTCCTGCTGAAAGATTGAAAATTTC
AAGGTAGGAGTTGGTTTCTGGAAGCTGAGATTGAAGCCAAGCTTGTGTTGTTTGATGGGT
TCTCCCTCAAGTTTCCTCAAATCCATATACTGGGATTTGCCTCTTATTTTCTAAGCATTG
TGATTGGTTTTTTTTAGAGAGTTTGAAGCTTGGGTGAACTGCAAAATTGGGAGAATCCTA
CTTGTCATTTTTTGTAATGGAAT