Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0129g00400.t01
CDS Infomation

cds chromosome:12X:7:15648189:15655661:1 gene:VIT_07s0129g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAACTCTCGTCTCCCTTCATACACCGCCAAAAACCAAATCCATACTCATGCCTAACA
CCTGACCTTTCTTTCTCATCCTCATTTTCTCCATTCCCACTTCAAATTGACCTCAAAAAT
TCCAAAAGCACAAACCCCACATCGCTAAAATTTCGCATTCTCGCCGTTGCTGTAGACCCC
AAAGAACTCCCCCAAAACAGTCCTCAGAGGCTCCTCAAAGAGCTTGCGGAGCGTAAGAAA
ATCACATCCCCGAAGAAAAAGTTTCCCCCTAAGAGGTTCATTCTAAAACCCCCATTAGAT
GACGCCAGATTAGCACGAAGGTTTCTCAATAGCCCACAATTATCCCTCAAATCATTCCCT
TTATTGAGTTCTTGTTTACCGTCATCGCGGCTTAACAATGCCGATAAAGCTTGGATAGAC
GAATACTTGCTTGAAGCCAAGCAAGCCCTGGGGTACCCACTGGAGCCGTCCGACCAGTAT
GGGGATGATAATCCGGCTAAGCAATTTGATGCCTTGTTGTACTTGGCGTTTCAGCATCCG
TCGTGTGACAGGGCGAATGCTCGCCATGTGAGGTCGGGGCATTCAAGGCTGTGGTTTTTG
GGGCAGTATGTGCTTGAACTGGCGTTTGCAGAGTATTTCTTGCAGAGATATCCGAGGGAG
TCGCCGGCTCCGATGAGGGAAAGGGTGTTTGAATTGATTGGAAAGAGGAATCTTCCCCAG
TGGATCAAAGCAGCTAGCTTGCAGAATTTGGTATTTCCGTTTGATGACATGGACAGGTTG
ATTCGGAAGGAGCGCGAGCCTCCTGTGAAGTCTGTGTTCTGGGCTTTGTTTGGGGCAATA
TATTTATGTTATGGAATGCCAGAAGTATACCGTGTTCTTTTTGAAGTATTTGGAATGGAC
CCAGAACATGAGGACTGCCAGCCAAAGTTGAGGAGACAGCTTGAAGATGTAGATTATGTT
TCTGTGGAATTTGAAAACAACAAGCTCAGTTGGCAAGATGTTGCTGCCTATAAGCCTCCT
GAAGATGCTCTTTTTGCACATCCAAGACTTTTCAGGGCATGTGTTCCACCAGGTATGCAT
CGGTTCCGTGGAAACATATGGGATTACGACTGCAGACCCCAAGTTATGCATGCACTGGGT
TATCCTTTACCTGTAACTGATAGAATTCCAGATATTACTAAAGCAAGGAACATTGAACTT
GGACTTGGCCTACAGCTTTGCTTCTTGCACCCTTCGAAACACAAATTTGAGCATCCTCGC
TTCTGCTATGAGCGATTGGAATACGTTGGCCAAAAGATCCAGGATATTGTGATGGCTGAG
AGGTTGCTCATGAAGCATCTTGATGCTCCTGGGAAGTGGCTACAGGAGAAGCACCGCCGC
CTTCTTATGAACAAGTTCTGCGGGAGGTACTTGAGGGACAAGTATCTCCACCGCTTTATC
ATCTACTCTGAACAGGTTCAGGACTCGTATGAACACAATCGAAGACTAAGGAACCCAGCC
ACGACTGCTGTTCAACAAGCCATTCATGGCCTCTCCTACCTTGTATATGGGAAACCAGAC
GTAAGACGCCTCATGTTTGAGGTTTTTGATTTCGAGCAAATCCAACCCAAACCTGTATTA
AGATCTTAG

Peptide Sequence

PEP ID

VIT_07s0129g00400.t01
PEP Infomation

pep chromosome:12X:7:15648189:15655661:1 gene:VIT_07s0129g00400 transcript:VIT_07s0129g00400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELSSPFIHRQKPNPYSCLTPDLSFSSSFSPFPLQIDLKNSKSTNPTSLKFRILAVAVDP
KELPQNSPQRLLKELAERKKITSPKKKFPPKRFILKPPLDDARLARRFLNSPQLSLKSFP
LLSSCLPSSRLNNADKAWIDEYLLEAKQALGYPLEPSDQYGDDNPAKQFDALLYLAFQHP
SCDRANARHVRSGHSRLWFLGQYVLELAFAEYFLQRYPRESPAPMRERVFELIGKRNLPQ
WIKAASLQNLVFPFDDMDRLIRKEREPPVKSVFWALFGAIYLCYGMPEVYRVLFEVFGMD
PEHEDCQPKLRRQLEDVDYVSVEFENNKLSWQDVAAYKPPEDALFAHPRLFRACVPPGMH
RFRGNIWDYDCRPQVMHALGYPLPVTDRIPDITKARNIELGLGLQLCFLHPSKHKFEHPR
FCYERLEYVGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLRDKYLHRFI
IYSEQVQDSYEHNRRLRNPATTAVQQAIHGLSYLVYGKPDVRRLMFEVFDFEQIQPKPVL
RS

Transcript Sequence

Transcript ID

VIT_07s0129g00400.t01
Transcript Infomation

cdna chromosome:12X:7:15648189:15655661:1 gene:VIT_07s0129g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGCAACCCCTAACTCTCCATAAACCTCCATATATGGCTACTGAATTCGAAATCCATTTT
TAATACTCAAAGTTCCTTACGCTTATTTCTCCTTCTTCGCGCAAACCACCCACTTTATAT
ATTTTTGTCTTCTCATGGAACTCTCGTCTCCCTTCATACACCGCCAAAAACCAAATCCAT
ACTCATGCCTAACACCTGACCTTTCTTTCTCATCCTCATTTTCTCCATTCCCACTTCAAA
TTGACCTCAAAAATTCCAAAAGCACAAACCCCACATCGCTAAAATTTCGCATTCTCGCCG
TTGCTGTAGACCCCAAAGAACTCCCCCAAAACAGTCCTCAGAGGCTCCTCAAAGAGCTTG
CGGAGCGTAAGAAAATCACATCCCCGAAGAAAAAGTTTCCCCCTAAGAGGTTCATTCTAA
AACCCCCATTAGATGACGCCAGATTAGCACGAAGGTTTCTCAATAGCCCACAATTATCCC
TCAAATCATTCCCTTTATTGAGTTCTTGTTTACCGTCATCGCGGCTTAACAATGCCGATA
AAGCTTGGATAGACGAATACTTGCTTGAAGCCAAGCAAGCCCTGGGGTACCCACTGGAGC
CGTCCGACCAGTATGGGGATGATAATCCGGCTAAGCAATTTGATGCCTTGTTGTACTTGG
CGTTTCAGCATCCGTCGTGTGACAGGGCGAATGCTCGCCATGTGAGGTCGGGGCATTCAA
GGCTGTGGTTTTTGGGGCAGTATGTGCTTGAACTGGCGTTTGCAGAGTATTTCTTGCAGA
GATATCCGAGGGAGTCGCCGGCTCCGATGAGGGAAAGGGTGTTTGAATTGATTGGAAAGA
GGAATCTTCCCCAGTGGATCAAAGCAGCTAGCTTGCAGAATTTGGTATTTCCGTTTGATG
ACATGGACAGGTTGATTCGGAAGGAGCGCGAGCCTCCTGTGAAGTCTGTGTTCTGGGCTT
TGTTTGGGGCAATATATTTATGTTATGGAATGCCAGAAGTATACCGTGTTCTTTTTGAAG
TATTTGGAATGGACCCAGAACATGAGGACTGCCAGCCAAAGTTGAGGAGACAGCTTGAAG
ATGTAGATTATGTTTCTGTGGAATTTGAAAACAACAAGCTCAGTTGGCAAGATGTTGCTG
CCTATAAGCCTCCTGAAGATGCTCTTTTTGCACATCCAAGACTTTTCAGGGCATGTGTTC
CACCAGGTATGCATCGGTTCCGTGGAAACATATGGGATTACGACTGCAGACCCCAAGTTA
TGCATGCACTGGGTTATCCTTTACCTGTAACTGATAGAATTCCAGATATTACTAAAGCAA
GGAACATTGAACTTGGACTTGGCCTACAGCTTTGCTTCTTGCACCCTTCGAAACACAAAT
TTGAGCATCCTCGCTTCTGCTATGAGCGATTGGAATACGTTGGCCAAAAGATCCAGGATA
TTGTGATGGCTGAGAGGTTGCTCATGAAGCATCTTGATGCTCCTGGGAAGTGGCTACAGG
AGAAGCACCGCCGCCTTCTTATGAACAAGTTCTGCGGGAGGTACTTGAGGGACAAGTATC
TCCACCGCTTTATCATCTACTCTGAACAGGTTCAGGACTCGTATGAACACAATCGAAGAC
TAAGGAACCCAGCCACGACTGCTGTTCAACAAGCCATTCATGGCCTCTCCTACCTTGTAT
ATGGGAAACCAGACGTAAGACGCCTCATGTTTGAGGTTTTTGATTTCGAGCAAATCCAAC
CCAAACCTGTATTAAGATCTTAGAAACATATTTCAATCATCTTGTTAGTTAAAAATATAA
TACAGTCTTTGTAGTTGAAAA