Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0104g01360.t01
CDS Infomation

cds chromosome:12X:7:2380332:2383547:-1 gene:VIT_07s0104g01360 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONSTANS-like protein 13 [Source:UniProtKB/TrEMBL;Acc:F6HQ13]
Sequence

ATGAGTGATTCACCGGGAGACAATTTGCATCATCGTCACGAAGAAGAAGGCCAGAAGATG
ACGATCCAGAATCGGCTCTGCGACTTCTGTGGAGATTCCATGGCTCTATTGTACTGCAGA
GCCGACTCTGCAAAGCTCTGTCTCTCCTGCGACCGGGAGGTCCACTCCACCAACCAGCTG
TTCACCAAGCACACTCGCTCACGCCTCTGTGACGTCTGTGATGCCTCGCCTGCCTCGATT
CTCTGCTCCACCGACAACCTCGTTCTCTGCCAGAACTGTGATTGGGCAAAGCACGGCCGT
TCTTTGTCGTCGGCGCATGATCGAAGGCCTCTGGAGGGGTTCTCTGGGCAACCTTCGGTG
ACGGAGTTGTTGGCGTTTGTTGGGTTTGAAGATTTGGGGAAGAAATCTTTGTTTTGTGGA
GATGAGAGTGAGGTTAATGAGTTTTTGGGGTGTGGGGTTTATGAATCGGTGGGTGTGGAT
GAAGAGTTTTCAGATTTCCTGGTTTGGGACACTCCTGCTGTTGTTAATCTTGATGATTTG
ATTGTTTCAACTGCTTGTGATCACAACTTTCAAGCTATGGGGGTTCCTCCTCTGCCCAAG
AACCGTGGCGCTCCTTGCGGGCAACACAAAGCAGAAATAATTCATCAGCTTCGCCAATTG
GCAAAGATCGAACTGAGTTTTGATTTTGATCATGGAGATGCTAAACCGCCTATTGGCTTC
CAGTCCCATATACCCAAACAGCTCATTCAGAAAGAAAATGAATGTAACAGTTGTGACCAT
GAGGTGGAGTTTGTTTTTCCTACCTATGAGGCAAGTGCATTTCAGTGGTGCAGTGATGGC
AGTGAGGCTGCAAATCAAGTTCTCCCATCTGTACTATTAGGAAGTTGTGCTGACGAAAAG
TGTTTGGTTCCCAGGAAACATTCAGATATCGGTGGTAGTGTAAGCCATACCAATGGTAGC
GATGAAGGGAAATCAGAGTGTCCTGTTGTTACAAAAACATTACCAGCCCTTCCTAAAGTT
TCTGTGCATGAGCTAAACAGCCAGGAAAGAGACTCTGCAATTTCACGGTACAAGGAGAAG
AAGAAAACTAGAAGATATGAGAAGCACATCAGGTACGAGTCGCGGAAGGCTCGAGCAGAG
AGCAGGATACGAATCAAGGGGCGTTTTGCTAAGATGGATCACTGA

Peptide Sequence

PEP ID

VIT_07s0104g01360.t01
PEP Infomation

pep chromosome:12X:7:2380332:2383547:-1 gene:VIT_07s0104g01360 transcript:VIT_07s0104g01360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONSTANS-like protein 13 [Source:UniProtKB/TrEMBL;Acc:F6HQ13]
Sequence

MSDSPGDNLHHRHEEEGQKMTIQNRLCDFCGDSMALLYCRADSAKLCLSCDREVHSTNQL
FTKHTRSRLCDVCDASPASILCSTDNLVLCQNCDWAKHGRSLSSAHDRRPLEGFSGQPSV
TELLAFVGFEDLGKKSLFCGDESEVNEFLGCGVYESVGVDEEFSDFLVWDTPAVVNLDDL
IVSTACDHNFQAMGVPPLPKNRGAPCGQHKAEIIHQLRQLAKIELSFDFDHGDAKPPIGF
QSHIPKQLIQKENECNSCDHEVEFVFPTYEASAFQWCSDGSEAANQVLPSVLLGSCADEK
CLVPRKHSDIGGSVSHTNGSDEGKSECPVVTKTLPALPKVSVHELNSQERDSAISRYKEK
KKTRRYEKHIRYESRKARAESRIRIKGRFAKMDH

Transcript Sequence

Transcript ID

VIT_07s0104g01360.t01
Transcript Infomation

cdna chromosome:12X:7:2380332:2383547:-1 gene:VIT_07s0104g01360 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONSTANS-like protein 13 [Source:UniProtKB/TrEMBL;Acc:F6HQ13]
Sequence

AGAGTAGAACAGCGAGCATGAGTGATTCACCGGGAGACAATTTGCATCATCGTCACGAAG
AAGAAGGCCAGAAGATGACGATCCAGAATCGGCTCTGCGACTTCTGTGGAGATTCCATGG
CTCTATTGTACTGCAGAGCCGACTCTGCAAAGCTCTGTCTCTCCTGCGACCGGGAGGTCC
ACTCCACCAACCAGCTGTTCACCAAGCACACTCGCTCACGCCTCTGTGACGTCTGTGATG
CCTCGCCTGCCTCGATTCTCTGCTCCACCGACAACCTCGTTCTCTGCCAGAACTGTGATT
GGGCAAAGCACGGCCGTTCTTTGTCGTCGGCGCATGATCGAAGGCCTCTGGAGGGGTTCT
CTGGGCAACCTTCGGTGACGGAGTTGTTGGCGTTTGTTGGGTTTGAAGATTTGGGGAAGA
AATCTTTGTTTTGTGGAGATGAGAGTGAGGTTAATGAGTTTTTGGGGTGTGGGGTTTATG
AATCGGTGGGTGTGGATGAAGAGTTTTCAGATTTCCTGGTTTGGGACACTCCTGCTGTTG
TTAATCTTGATGATTTGATTGTTTCAACTGCTTGTGATCACAACTTTCAAGCTATGGGGG
TTCCTCCTCTGCCCAAGAACCGTGGCGCTCCTTGCGGGCAACACAAAGCAGAAATAATTC
ATCAGCTTCGCCAATTGGCAAAGATCGAACTGAGTTTTGATTTTGATCATGGAGATGCTA
AACCGCCTATTGGCTTCCAGTCCCATATACCCAAACAGCTCATTCAGAAAGAAAATGAAT
GTAACAGTTGTGACCATGAGGTGGAGTTTGTTTTTCCTACCTATGAGGCAAGTGCATTTC
AGTGGTGCAGTGATGGCAGTGAGGCTGCAAATCAAGTTCTCCCATCTGTACTATTAGGAA
GTTGTGCTGACGAAAAGTGTTTGGTTCCCAGGAAACATTCAGATATCGGTGGTAGTGTAA
GCCATACCAATGGTAGCGATGAAGGGAAATCAGAGTGTCCTGTTGTTACAAAAACATTAC
CAGCCCTTCCTAAAGTTTCTGTGCATGAGCTAAACAGCCAGGAAAGAGACTCTGCAATTT
CACGGTACAAGGAGAAGAAGAAAACTAGAAGATATGAGAAGCACATCAGGTACGAGTCGC
GGAAGGCTCGAGCAGAGAGCAGGATACGAATCAAGGGGCGTTTTGCTAAGATGGATCACT
GAAATTGCAGTATGCATCCATGGCATCAAACTGGTAGAATTAGCTCTCAGTTTACACCAC
ATTGTTACAAAAGAAATGTATGTTGGTCTTGTATCAGTTGAGTTGAATTGTTTTGTGTTG
TATGATAATAGCCTTTTGAAGCTCCAGTTTGGTTGTCCAGTAGTTTCTTCCTTCAGTGAG
ATA