Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0031g02690.t01
CDS Infomation

cds chromosome:12X:7:19106772:19130616:1 gene:VIT_07s0031g02690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACAGATGGCTCTCTCTGCGTCACCAACACTCACTCTCTTCAATAGGGTTTCAGGT
AGATCAAAACAATGGGGGATGCTATTTCCTGGTTCTTCGAGAAAACTTGCAATCAATATG
TCAATACTTATGAACTTCCAGAGCAAAGGATTCAGTTTTGTTGCTTCGGGTGCAACACAG
TGGAATGGAGGTGTTGCAGAACTAGTGGAAGGTGAAGCAGCATCACGGCCCTATACATGG
CCAGATAAGAAGAAGCCCAGAGTGTGCATACTAGGTGGCGGCTTTGGAGGTTTATATACG
GCCTTAAGGCTAGAATCCCTTGTATGGCCAGAGGACAAGAAACCTCAGGTGCTTCTTGTT
GATCAGTCTGAACGTTTTGTTTTTAAGCCAATGTTGTATGAACTTCTAACGGGAGAAGTA
GATGCATGGGAAATAGCTCCGCGTTTCTCAGATTTGCTGGCAAACACTGGTGTGCAGTTT
TTCCAAGACAGGGTCAAAGTATTGCATCCCTCTGACCATTTGGGAATGAACGGGCCAACA
GTATCTAGCTGTGGAGGAACCGTCCACCTTGAAAGTGGTCTGGTTATTGAATATGACTGG
TTGGTTCTTGCTTTGGGAGCTGAAGCCAAACTGGATGTTGTCCCAGGAGCTGCAGAATTT
GCATTGCCATTCTCCACCCTGGAGGATGCATGTAGGGTTGACAATAGGTTAAGAACTTTA
GAGCGGAAGAGGTTTGGTAGAGACTTTCCGATCCGAGTAGCTGTTGTAGGCTGTGGTTAC
TCTGGAGTTGAGTTAGCTGCCACAGTATCAGAGAGGCTGCAAGATAAAGGAATAGTGCAA
GCTATTAATGTAGAGACCACAATCTGCCCAACTGCCCCACCTGGCAATAGGGAAGCTGCC
TTAAAGGTGCTCTCATCCCGAAATGTTGAACTTCTACTGGGTTTCTTTGTCCGCTGTATA
AGAAAAGCTAGCATTTCTGAAGTTTCAGAGAAGCAAACAGAGAGTGGCACACTTCTGGAT
GCTGCAGCTGAGCATGAGCCTGAAAAACTTATTTTGGAACTTCAACCAGCGGAAAGGGGC
TTACAAAGTCAAATTCTGGAAGCAGATTTAATATTATGGACAGTTGGTTCTAAACCTCAA
CTTCCTCAACTGGAACCCTGTGAATGGCCCCATGAGCTTCCCCTTAATGCCAGGGGACAA
GCTGAAACAGATGAAACTCTTCGTGTTAAGGGCCATCCACGCATATTTGCAGTTGGTGAT
TCTTCTTCTTTGAGGGATTCCAAAGGAAAGCTTCTTCCAGCAACTGCACAGGTTGCTTTT
CAGCAAGCAGACTTTGCTGGTTGGAATCTGTGGGCAGCAATCAATGACCGTCCTTTACTG
CCATTTAGGTTTCAGAATTTGGGTGAGATGATGACTCTAGGAAGAAATGATGCTGCTATT
TCCCCGAGCTTCATTGAGGGGCTAACCTTGGAGGGACCTATTGGCCATGCAGCAAGGAAA
CTGGCATATTTGATCAGATTGCCAACAGATGAGCACCGGCTCAAAGTGGGGATCAGTTGG
CTCACAAAGTCTGCCATAGATTCAGTTGCAGCAGTGCAGAGCAGTGTGATCAAAGTCCTT
TCGGGTTCTTAA

Peptide Sequence

PEP ID

VIT_07s0031g02690.t01
PEP Infomation

pep chromosome:12X:7:19106772:19130616:1 gene:VIT_07s0031g02690 transcript:VIT_07s0031g02690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAQMALSASPTLTLFNRVSGRSKQWGMLFPGSSRKLAINMSILMNFQSKGFSFVASGATQ
WNGGVAELVEGEAASRPYTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLV
DQSERFVFKPMLYELLTGEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPT
VSSCGGTVHLESGLVIEYDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTL
ERKRFGRDFPIRVAVVGCGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREAA
LKVLSSRNVELLLGFFVRCIRKASISEVSEKQTESGTLLDAAAEHEPEKLILELQPAERG
LQSQILEADLILWTVGSKPQLPQLEPCEWPHELPLNARGQAETDETLRVKGHPRIFAVGD
SSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAI
SPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQSSVIKVL
SGS

Transcript Sequence

Transcript ID

VIT_07s0031g02690.t01
Transcript Infomation

cdna chromosome:12X:7:19106772:19130616:1 gene:VIT_07s0031g02690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCGCTTTTCGCCTGTCTGTCTCCCTGGGGCTTTTCCTTCTCCAAAATGGCACAGATGG
CTCTCTCTGCGTCACCAACACTCACTCTCTTCAATAGGGTTTCAGGTAGATCAAAACAAT
GGGGGATGCTATTTCCTGGTTCTTCGAGAAAACTTGCAATCAATATGTCAATACTTATGA
ACTTCCAGAGCAAAGGATTCAGTTTTGTTGCTTCGGGTGCAACACAGTGGAATGGAGGTG
TTGCAGAACTAGTGGAAGGTGAAGCAGCATCACGGCCCTATACATGGCCAGATAAGAAGA
AGCCCAGAGTGTGCATACTAGGTGGCGGCTTTGGAGGTTTATATACGGCCTTAAGGCTAG
AATCCCTTGTATGGCCAGAGGACAAGAAACCTCAGGTGCTTCTTGTTGATCAGTCTGAAC
GTTTTGTTTTTAAGCCAATGTTGTATGAACTTCTAACGGGAGAAGTAGATGCATGGGAAA
TAGCTCCGCGTTTCTCAGATTTGCTGGCAAACACTGGTGTGCAGTTTTTCCAAGACAGGG
TCAAAGTATTGCATCCCTCTGACCATTTGGGAATGAACGGGCCAACAGTATCTAGCTGTG
GAGGAACCGTCCACCTTGAAAGTGGTCTGGTTATTGAATATGACTGGTTGGTTCTTGCTT
TGGGAGCTGAAGCCAAACTGGATGTTGTCCCAGGAGCTGCAGAATTTGCATTGCCATTCT
CCACCCTGGAGGATGCATGTAGGGTTGACAATAGGTTAAGAACTTTAGAGCGGAAGAGGT
TTGGTAGAGACTTTCCGATCCGAGTAGCTGTTGTAGGCTGTGGTTACTCTGGAGTTGAGT
TAGCTGCCACAGTATCAGAGAGGCTGCAAGATAAAGGAATAGTGCAAGCTATTAATGTAG
AGACCACAATCTGCCCAACTGCCCCACCTGGCAATAGGGAAGCTGCCTTAAAGGTGCTCT
CATCCCGAAATGTTGAACTTCTACTGGGTTTCTTTGTCCGCTGTATAAGAAAAGCTAGCA
TTTCTGAAGTTTCAGAGAAGCAAACAGAGAGTGGCACACTTCTGGATGCTGCAGCTGAGC
ATGAGCCTGAAAAACTTATTTTGGAACTTCAACCAGCGGAAAGGGGCTTACAAAGTCAAA
TTCTGGAAGCAGATTTAATATTATGGACAGTTGGTTCTAAACCTCAACTTCCTCAACTGG
AACCCTGTGAATGGCCCCATGAGCTTCCCCTTAATGCCAGGGGACAAGCTGAAACAGATG
AAACTCTTCGTGTTAAGGGCCATCCACGCATATTTGCAGTTGGTGATTCTTCTTCTTTGA
GGGATTCCAAAGGAAAGCTTCTTCCAGCAACTGCACAGGTTGCTTTTCAGCAAGCAGACT
TTGCTGGTTGGAATCTGTGGGCAGCAATCAATGACCGTCCTTTACTGCCATTTAGGTTTC
AGAATTTGGGTGAGATGATGACTCTAGGAAGAAATGATGCTGCTATTTCCCCGAGCTTCA
TTGAGGGGCTAACCTTGGAGGGACCTATTGGCCATGCAGCAAGGAAACTGGCATATTTGA
TCAGATTGCCAACAGATGAGCACCGGCTCAAAGTGGGGATCAGTTGGCTCACAAAGTCTG
CCATAGATTCAGTTGCAGCAGTGCAGAGCAGTGTGATCAAAGTCCTTTCGGGTTCTTAAT
TAGAACCCACACTTGCTCCACTTACTCTCTGAAAGGCAAGTGGGGTGGGAGGGATTGATT
ACTTAATCCTTCTGATGCGTGGTATTCACGAGTTGATACCTGATGAAAAATTTTCTATGC
ATAACAGAGACTAATAAAAG