Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0031g02340.t01
CDS Infomation

cds chromosome:12X:7:18469572:18473342:1 gene:VIT_07s0031g02340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGAGAATGCTGCCACAAAAAACCACCACCACCACCACCAAGTCTTTGATATCTCC
ATAGATGTGCTTCCTCATCAAAACACCTCCAAATGCTTCGATGACGATGGCCGCCTCAAG
CGAACCGGAACTGTTTGGACTGCAAGTGCCCACATAATAACAGCTGTGATTGGTTCTGGA
GTCCTTTCGTTAGCATGGGCTATAGCTCAGCTTGGATGGATTGCTGGTCCAGCAGTCATG
TTCTTGTTCTCCTTTGTAATTTACTACACTTCATCACTTCTAGCTGACTGCTACCGCTCT
GGCGACCGTGTCTCCGGCAAGAGAAACTATACTTATATGGATGCAGTTCGATCCAATCTC
GGTGGAGTTAAGGTCAAGGTATGTGGACTGATTCAGTACTTGAATATTTTTGGTGTCGCC
ATCGGATACACTATTGCAGCTTCTATTAGCATGATGGCGGTGAAAAGGTCTAATTGTTTC
CATGAGAGCGGGCGGAAGAACCCGTGTCACATATCAAGCTACCCTTATATGATCATGTTT
GGTATAGCGGAAATTGCATTTTCTCAAATCCCGGACTTTGATCAAATATGGTGGCTCTCA
ATTGTGGCCGCGGTCATGTCCTTTACTTACTCTTCAATAGGTCTTGCACTTGGAGTTGCC
AAAGTTGTAGCTGCTGGAGGTTTCAAGGGTAGTCTCACTGGAATAAGCATTGGAACTGTA
ACTCAAACCCAAAAGATTTGGAGGAGCTTCCAAGCTTTAGGCGACATAGCTTTTGCATAC
TCATATTCCATCATCCTCATCGAAATTCAGGACACCCTCAAGTCCCCACCATCAGAATCA
AAGACAATGAAGAAGGCCACCTTAGTAAGTATTGCGGTCACAACAGCTTTCTACATGCTT
TGTGGGTGCATGGGGTATGCAGCTTTTGGGGACCTTGCACCTGGAAACCTTCTAACCGGA
TTTGGCTTCTACAACCCCTATTGGCTCCTGGATATTGCAAATGTTGCCATAGTAGTCCAC
CTTGTTGGAGCATATCAAGTCTACTGCCAGCCACTTTTCGCCTTCACTGAGAAATGGGCA
GCCCAAAAATGGCCCCACAGCGACTTCATCACCAAGGAAATCAAAATCCCAATCCCGGGT
TGTAGCCCTTTTAGCCTAAACCTCTTCAGATTAGTGTGGCGATCGGCTTTTGTGGTTGTA
ACCACTGTCATATCCATGCTCCTCCCTTTCTTCAACGACGTGGTGGGAATCCTAGGGGCA
TTCGGCTTTTGGCCTCTAACAGTCTATTTCCCGGTTGAGATGTATATTGTACAGAAGAAG
ATACCCAAGTGGAGTACCAGATGGATTTGCCTCCAGATGCTGAGTGTTGCTTGTCTAATC
ATTTCAATTGCAGCTGCTGCTGGCTCCATTGCTGGTGTAGTGCTTGATCTCAAGTCAGCA
CCACCACCCAAAGTGCTTTTGATCTCAACCGCAGAGACTGAAAAGAGGAGATACAAGGCA
AATGAGGAAATAACGGAGGGCATTGAAAAGATTATAGCAACTTGGATGGCACACAAGAAA
AGTTCATCACCCCCACCCACCCACCCATCAACAGTCAACACTTCCCTTGTTTTTCCTTTT
ATTATGCTTCTCAAAAAAATCCAAGGGAAAGTGATTGATCCTGAAAGGCCAGAAGGCGAA
ATGCGAAATTAA

Peptide Sequence

PEP ID

VIT_07s0031g02340.t01
PEP Infomation

pep chromosome:12X:7:18469572:18473342:1 gene:VIT_07s0031g02340 transcript:VIT_07s0031g02340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGENAATKNHHHHHQVFDISIDVLPHQNTSKCFDDDGRLKRTGTVWTASAHIITAVIGSG
VLSLAWAIAQLGWIAGPAVMFLFSFVIYYTSSLLADCYRSGDRVSGKRNYTYMDAVRSNL
GGVKVKVCGLIQYLNIFGVAIGYTIAASISMMAVKRSNCFHESGRKNPCHISSYPYMIMF
GIAEIAFSQIPDFDQIWWLSIVAAVMSFTYSSIGLALGVAKVVAAGGFKGSLTGISIGTV
TQTQKIWRSFQALGDIAFAYSYSIILIEIQDTLKSPPSESKTMKKATLVSIAVTTAFYML
CGCMGYAAFGDLAPGNLLTGFGFYNPYWLLDIANVAIVVHLVGAYQVYCQPLFAFTEKWA
AQKWPHSDFITKEIKIPIPGCSPFSLNLFRLVWRSAFVVVTTVISMLLPFFNDVVGILGA
FGFWPLTVYFPVEMYIVQKKIPKWSTRWICLQMLSVACLIISIAAAAGSIAGVVLDLKSA
PPPKVLLISTAETEKRRYKANEEITEGIEKIIATWMAHKKSSSPPPTHPSTVNTSLVFPF
IMLLKKIQGKVIDPERPEGEMRN

Transcript Sequence

Transcript ID

VIT_07s0031g02340.t01
Transcript Infomation

cdna chromosome:12X:7:18469572:18473342:1 gene:VIT_07s0031g02340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGATGGGTGAGAATGCTGCCACAAAAAACCACCACCACCACCACCAAGTCTTTGATATC
TCCATAGATGTGCTTCCTCATCAAAACACCTCCAAATGCTTCGATGACGATGGCCGCCTC
AAGCGAACCGGAACTGTTTGGACTGCAAGTGCCCACATAATAACAGCTGTGATTGGTTCT
GGAGTCCTTTCGTTAGCATGGGCTATAGCTCAGCTTGGATGGATTGCTGGTCCAGCAGTC
ATGTTCTTGTTCTCCTTTGTAATTTACTACACTTCATCACTTCTAGCTGACTGCTACCGC
TCTGGCGACCGTGTCTCCGGCAAGAGAAACTATACTTATATGGATGCAGTTCGATCCAAT
CTCGGTGGAGTTAAGGTCAAGGTATGTGGACTGATTCAGTACTTGAATATTTTTGGTGTC
GCCATCGGATACACTATTGCAGCTTCTATTAGCATGATGGCGGTGAAAAGGTCTAATTGT
TTCCATGAGAGCGGGCGGAAGAACCCGTGTCACATATCAAGCTACCCTTATATGATCATG
TTTGGTATAGCGGAAATTGCATTTTCTCAAATCCCGGACTTTGATCAAATATGGTGGCTC
TCAATTGTGGCCGCGGTCATGTCCTTTACTTACTCTTCAATAGGTCTTGCACTTGGAGTT
GCCAAAGTTGTAGCTGCTGGAGGTTTCAAGGGTAGTCTCACTGGAATAAGCATTGGAACT
GTAACTCAAACCCAAAAGATTTGGAGGAGCTTCCAAGCTTTAGGCGACATAGCTTTTGCA
TACTCATATTCCATCATCCTCATCGAAATTCAGGACACCCTCAAGTCCCCACCATCAGAA
TCAAAGACAATGAAGAAGGCCACCTTAGTAAGTATTGCGGTCACAACAGCTTTCTACATG
CTTTGTGGGTGCATGGGGTATGCAGCTTTTGGGGACCTTGCACCTGGAAACCTTCTAACC
GGATTTGGCTTCTACAACCCCTATTGGCTCCTGGATATTGCAAATGTTGCCATAGTAGTC
CACCTTGTTGGAGCATATCAAGTCTACTGCCAGCCACTTTTCGCCTTCACTGAGAAATGG
GCAGCCCAAAAATGGCCCCACAGCGACTTCATCACCAAGGAAATCAAAATCCCAATCCCG
GGTTGTAGCCCTTTTAGCCTAAACCTCTTCAGATTAGTGTGGCGATCGGCTTTTGTGGTT
GTAACCACTGTCATATCCATGCTCCTCCCTTTCTTCAACGACGTGGTGGGAATCCTAGGG
GCATTCGGCTTTTGGCCTCTAACAGTCTATTTCCCGGTTGAGATGTATATTGTACAGAAG
AAGATACCCAAGTGGAGTACCAGATGGATTTGCCTCCAGATGCTGAGTGTTGCTTGTCTA
ATCATTTCAATTGCAGCTGCTGCTGGCTCCATTGCTGGTGTAGTGCTTGATCTCAAGTCA
GCACCACCACCCAAAGTGCTTTTGATCTCAACCGCAGAGACTGAAAAGAGGAGATACAAG
GCAAATGAGGAAATAACGGAGGGCATTGAAAAGATTATAGCAACTTGGATGGCACACAAG
AAAAGTTCATCACCCCCACCCACCCACCCATCAACAGTCAACACTTCCCTTGTTTTTCCT
TTTATTATGCTTCTCAAAAAAATCCAAGGGAAAGTGATTGATCCTGAAAGGCCAGAAGGC
GAAATGCGAAATTAA