Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0031g02330.t01
CDS Infomation

cds chromosome:12X:7:18443502:18452666:1 gene:VIT_07s0031g02330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTTCAAAAGAGAGTTGCAGAAACGAGCTCCGAACTGCAATTTGTCAACTCAGCGAC
CGTTGCCTCTACTCTGCTGCCAAATGGGCAGCAGAGCAGTTGGTGGGGATCGAGCAGGAT
CCGGCCAAATTCACACCGTCGCACACCAGATTCCAGCTAGGTAGTTCCAGCATTCGCCGG
AGATTTCGCACTAATGAGATTGCTTCCACACCAACCGCCGGCGTATCTTCCGTATCTACA
CCAATGCTGGAGGAGGACGAAGCCATAGATGGTGATTTCTACCTTTTAGCTAAGTCGTAC
TTTGATTGCCGGGAGTATCGTAGGGCTGCTCATGTGCTTCGTGATCAGACTCGAAAGAAA
GCCGTGTTCTTACGATGTTATGCTCTTTATCTGGCTGGAGAGAAGCGCAAAGAAGAAGAG
ATGATAGAACTTGAGGGACCTTTGGGTAAGAGTGATGCTGTGAACCATGAACTGGTTTAT
CTTGAGAGGGAGTTGTCAATGCTCCGCAAAAATGGCACTGTTGATCCCTTTGGACTGTAT
TTATATGGACTTGTGCTCAACAAGAAAGGCAGCGAAAATCTTGCCCGTACAGTACTGGTG
GAGTCAGTGAATAGCTACCCCTGGAACTGGAATGCTTGGACGGAGCTGCAGTCCTTATGC
ACTACAATTGACATTTTGAATAGCCTTAATCTCAATTATCATTGGATGAAAGACTTCTTC
CTTGCCAATGCTTACCAAGAACTCAGGATGCACAATGAATCCTTGGGAAAATATGAATAT
TTACAAGGCACTTTTAGTTTCAGTAACTACATTCAAGCTCAGATTGCAAAAGCCCAGTAC
AGTCTGAGGGAATTTGAACAAGTAGAAGTAATATTTGAAGAGCTTTTAAGGAATGATCCT
TATCGAGTTGAAGACATGGATATGTATTCCAATGTGCTATACGCAAAGGAGTGTTTCTCC
ACTTTAAGTTACCTTGCTCACAGGGTATTCTTGACTGATAAATACAGACCTGAGTCTTGT
TTCATTATTGGGAACTATTACAGTTTGAAGGGGCAGCATGAGAAGTCAGTTGTGTATTTT
AGGAGGGCACTCAAATTGAACAAAAATTACTTATCTGCTTGGACACTCATGGGTCATGAG
TATGTTGAGATGAAGAACACTCCAGCTGCTGTTGATGCCTATCGAAGGGCTGTAGATATA
AATCCGTGTGATTATCGAGCCTGGTATGGGTTGGGACAAGCATATGAGATGATGGGCATG
CCCTATTATGCTCTTCATTACTTTCGAAAATCAGTTTTCCTGCAGCCAAATGATTCTCGG
TTATGGATTGCCATGGGTCAGTGCTATGAAACCGACCAGCTTCAAATGCTTGAGGATGCC
ATCAAGTGTTACAAAAGGGCAGCAAATTGTAATGACACTGAGGCAATAGCTCTGCACCAG
ATAGCAAAGCTAAGTAAGGATCTGAAGCGTTCTGAAGAAGCTGCATTTTACTACAAAAAA
GATTTGGAGAGGATGGAAGCTGAAGAGAGGGAAGGGCCAAATTTGGTTGAAGCTCTGCTT
TTTCTTGCTACTTACTACAAATCCCAGAAGAGATTTGAAGAAGCAGAGATCTATTGCACC
CGTCTTCTTGATTACACTGGCCCAGAGAAGGAAACTGCAAAGAGTTTACTCCGGGGAATG
AGAAAAGCACAATCTGGTTTCTCTTCTATTGATATTGAGCATTTGCCCCCCTGA

Peptide Sequence

PEP ID

VIT_07s0031g02330.t01
PEP Infomation

pep chromosome:12X:7:18443502:18452666:1 gene:VIT_07s0031g02330 transcript:VIT_07s0031g02330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSKESCRNELRTAICQLSDRCLYSAAKWAAEQLVGIEQDPAKFTPSHTRFQLGSSSIRR
RFRTNEIASTPTAGVSSVSTPMLEEDEAIDGDFYLLAKSYFDCREYRRAAHVLRDQTRKK
AVFLRCYALYLAGEKRKEEEMIELEGPLGKSDAVNHELVYLERELSMLRKNGTVDPFGLY
LYGLVLNKKGSENLARTVLVESVNSYPWNWNAWTELQSLCTTIDILNSLNLNYHWMKDFF
LANAYQELRMHNESLGKYEYLQGTFSFSNYIQAQIAKAQYSLREFEQVEVIFEELLRNDP
YRVEDMDMYSNVLYAKECFSTLSYLAHRVFLTDKYRPESCFIIGNYYSLKGQHEKSVVYF
RRALKLNKNYLSAWTLMGHEYVEMKNTPAAVDAYRRAVDINPCDYRAWYGLGQAYEMMGM
PYYALHYFRKSVFLQPNDSRLWIAMGQCYETDQLQMLEDAIKCYKRAANCNDTEAIALHQ
IAKLSKDLKRSEEAAFYYKKDLERMEAEEREGPNLVEALLFLATYYKSQKRFEEAEIYCT
RLLDYTGPEKETAKSLLRGMRKAQSGFSSIDIEHLPP

Transcript Sequence

Transcript ID

VIT_07s0031g02330.t01
Transcript Infomation

cdna chromosome:12X:7:18443502:18452666:1 gene:VIT_07s0031g02330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAAGAGAGAGATCGATGAGTTCAAAAGAGAGTTGCAGAAACGAGCTCCGAACTGCAAT
TTGTCAACTCAGCGACCGTTGCCTCTACTCTGCTGCCAAATGGGCAGCAGAGCAGTTGGT
GGGGATCGAGCAGGATCCGGCCAAATTCACACCGTCGCACACCAGATTCCAGCTAGGTAG
TTCCAGCATTCGCCGGAGATTTCGCACTAATGAGATTGCTTCCACACCAACCGCCGGCGT
ATCTTCCGTATCTACACCAATGCTGGAGGAGGACGAAGCCATAGATGGTGATTTCTACCT
TTTAGCTAAGTCGTACTTTGATTGCCGGGAGTATCGTAGGGCTGCTCATGTGCTTCGTGA
TCAGACTCGAAAGAAAGCCGTGTTCTTACGATGTTATGCTCTTTATCTGGCTGGAGAGAA
GCGCAAAGAAGAAGAGATGATAGAACTTGAGGGACCTTTGGGTAAGAGTGATGCTGTGAA
CCATGAACTGGTTTATCTTGAGAGGGAGTTGTCAATGCTCCGCAAAAATGGCACTGTTGA
TCCCTTTGGACTGTATTTATATGGACTTGTGCTCAACAAGAAAGGCAGCGAAAATCTTGC
CCGTACAGTACTGGTGGAGTCAGTGAATAGCTACCCCTGGAACTGGAATGCTTGGACGGA
GCTGCAGTCCTTATGCACTACAATTGACATTTTGAATAGCCTTAATCTCAATTATCATTG
GATGAAAGACTTCTTCCTTGCCAATGCTTACCAAGAACTCAGGATGCACAATGAATCCTT
GGGAAAATATGAATATTTACAAGGCACTTTTAGTTTCAGTAACTACATTCAAGCTCAGAT
TGCAAAAGCCCAGTACAGTCTGAGGGAATTTGAACAAGTAGAAGTAATATTTGAAGAGCT
TTTAAGGAATGATCCTTATCGAGTTGAAGACATGGATATGTATTCCAATGTGCTATACGC
AAAGGAGTGTTTCTCCACTTTAAGTTACCTTGCTCACAGGGTATTCTTGACTGATAAATA
CAGACCTGAGTCTTGTTTCATTATTGGGAACTATTACAGTTTGAAGGGGCAGCATGAGAA
GTCAGTTGTGTATTTTAGGAGGGCACTCAAATTGAACAAAAATTACTTATCTGCTTGGAC
ACTCATGGGTCATGAGTATGTTGAGATGAAGAACACTCCAGCTGCTGTTGATGCCTATCG
AAGGGCTGTAGATATAAATCCGTGTGATTATCGAGCCTGGTATGGGTTGGGACAAGCATA
TGAGATGATGGGCATGCCCTATTATGCTCTTCATTACTTTCGAAAATCAGTTTTCCTGCA
GCCAAATGATTCTCGGTTATGGATTGCCATGGGTCAGTGCTATGAAACCGACCAGCTTCA
AATGCTTGAGGATGCCATCAAGTGTTACAAAAGGGCAGCAAATTGTAATGACACTGAGGC
AATAGCTCTGCACCAGATAGCAAAGCTAAGTAAGGATCTGAAGCGTTCTGAAGAAGCTGC
ATTTTACTACAAAAAAGATTTGGAGAGGATGGAAGCTGAAGAGAGGGAAGGGCCAAATTT
GGTTGAAGCTCTGCTTTTTCTTGCTACTTACTACAAATCCCAGAAGAGATTTGAAGAAGC
AGAGATCTATTGCACCCGTCTTCTTGATTACACTGGCCCAGAGAAGGAAACTGCAAAGAG
TTTACTCCGGGGAATGAGAAAAGCACAATCTGGTTTCTCTTCTATTGATATTGAGCATTT
GCCCCCCTGATACTACCTTCATGTGATAGTGGTATAAAAATCTTTGAAGCA