Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0031g01240.t01
CDS Infomation

cds chromosome:12X:7:17325048:17330437:1 gene:VIT_07s0031g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATAGCGTTTTTAGTGAACAGATTCTGGCAGATAAGCTTTCCAAGCTCAACAGCACC
CAACAGTGTATCGAAACGTTATCACATTGGTGTATTTTTCACCGGAGCAAAGCAGAACTA
GTTGTTGCAACATGGGACAAACAGTTTCACAGTTCAGAAATGGCTCAGAAAGTTCCCCTT
TTGTACCTTGCAAATGATATTCTACAGAACAGTAAACGTAAAGGGAACGAATTTGTTAGT
GAGTTTTGGAAGGTTCTTCCTGCAGCACTTAAGGCCGTTGTCGAGAAAGGCGATGATCAT
GGAAAGAACGTGGTCTCTCGATTGGTTCATATATGGGAAGAAAGGAGAGTGTTTGGATCC
CGTGCACAGAGTCTCAATGATGTAATGCTTGGGGAAGAACTGCCTCCACCCTTGGAATTC
AGCAAAAAACGTTCTCGTTCTGTCAAAATTGTAAGAAGGGATATGCGCTCCATAAGAACG
AAATTATCTATTGGAGGGTCAGCAGAAAAAATAGTGTCTGCATTTCATGTGGTGCTTAGT
GATCAATCCACTGAAGATGCTGAGATGAATAAATGCAAATCTGCTGTTCACCATGTGAGG
AAGATGGAGAGAGATGTTGATACTGCATGTTTAAATGCAAAGGATCCCAAGCGAAAAACT
TTGGCCAAAGAATTAGAGGATGAAGAAGATGTTCTAAAGCAGTGTATTGAGAAACTTAAA
TTAGTTGAAGCAAATAGAGAAGCCCTTGTATCTCAATTGAAAGAAGCACTGCATGAACAG
GAATCTGAACTGGAGAATATTCGCACTCAGATGCAGGTAGCACATGCACAGGCAGAGGAA
GCCAGCAACATGCGGAAGCGGCTCAATGATGAAAACTTTACAGTGGCAAAACCATCCCAT
GCAACTTCACCATTAGAAGCAAATGCAAAAGTAGGCCAAGCATCCAAGAGGACAGCTGCA
GATATAGCAGCTGAGGTTGCAGACAAGCTTACAGCTTCGAGCTCCTCTCAGTTGATCATG
ACTTCTGTTCTCTCAACATTTGCAGCTGAAGAGGCGAAGAATGCCGGTCTGACAAAGACC
TCTACAGTATCAAATTCTTTCACACCCATGCCCAGCAATTCAAAACCAGAAAACTCCATG
CCAGTTTCAGATCCCAATGTTTTTATGTCAACCCAGACCCTTACTGCTCCACCAAACCAA
CCATATCAATCAGTTATTATTGCCCCACCAACCATGCAGAGCCAGACCCCAACTTCTCAA
ACTCAGTATCATATGCTTCCCAATCCACCTTCCCAGCAATATTTGCAACCATCAGGAGGG
ATTATGAACCCATATGGTTATGGTAGCATTCCGCCCTTGCCACCAGGGCCACCTCCACCC
CCATCTACACTACATATGGTGAATCCAATGGCTCCTTTGCCTCAGCAGCAATCAATACCA
TTGGTTCAGCAGCCAGCTCTATTAACTCGTCATCAACCTATGCCCTTGACTCAGCAACCC
CCAGCACCTCCCAGTTTCCGGCCGCTTCAGCTTCCTGGAATGGTGTATTATGGTCTCCCT
CATCATTCTCAGTGA

Peptide Sequence

PEP ID

VIT_07s0031g01240.t01
PEP Infomation

pep chromosome:12X:7:17325048:17330437:1 gene:VIT_07s0031g01240 transcript:VIT_07s0031g01240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELVVATWDKQFHSSEMAQKVPL
LYLANDILQNSKRKGNEFVSEFWKVLPAALKAVVEKGDDHGKNVVSRLVHIWEERRVFGS
RAQSLNDVMLGEELPPPLEFSKKRSRSVKIVRRDMRSIRTKLSIGGSAEKIVSAFHVVLS
DQSTEDAEMNKCKSAVHHVRKMERDVDTACLNAKDPKRKTLAKELEDEEDVLKQCIEKLK
LVEANREALVSQLKEALHEQESELENIRTQMQVAHAQAEEASNMRKRLNDENFTVAKPSH
ATSPLEANAKVGQASKRTAADIAAEVADKLTASSSSQLIMTSVLSTFAAEEAKNAGLTKT
STVSNSFTPMPSNSKPENSMPVSDPNVFMSTQTLTAPPNQPYQSVIIAPPTMQSQTPTSQ
TQYHMLPNPPSQQYLQPSGGIMNPYGYGSIPPLPPGPPPPPSTLHMVNPMAPLPQQQSIP
LVQQPALLTRHQPMPLTQQPPAPPSFRPLQLPGMVYYGLPHHSQ

Transcript Sequence

Transcript ID

VIT_07s0031g01240.t01
Transcript Infomation

cdna chromosome:12X:7:17325048:17330437:1 gene:VIT_07s0031g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCATTGTTTTGTCGGAATGAATAGCGTTTTTAGTGAACAGATTCTGGCAGATAAGCTTT
CCAAGCTCAACAGCACCCAACAGTGTATCGAAACGTTATCACATTGGTGTATTTTTCACC
GGAGCAAAGCAGAACTAGTTGTTGCAACATGGGACAAACAGTTTCACAGTTCAGAAATGG
CTCAGAAAGTTCCCCTTTTGTACCTTGCAAATGATATTCTACAGAACAGTAAACGTAAAG
GGAACGAATTTGTTAGTGAGTTTTGGAAGGTTCTTCCTGCAGCACTTAAGGCCGTTGTCG
AGAAAGGCGATGATCATGGAAAGAACGTGGTCTCTCGATTGGTTCATATATGGGAAGAAA
GGAGAGTGTTTGGATCCCGTGCACAGAGTCTCAATGATGTAATGCTTGGGGAAGAACTGC
CTCCACCCTTGGAATTCAGCAAAAAACGTTCTCGTTCTGTCAAAATTGTAAGAAGGGATA
TGCGCTCCATAAGAACGAAATTATCTATTGGAGGGTCAGCAGAAAAAATAGTGTCTGCAT
TTCATGTGGTGCTTAGTGATCAATCCACTGAAGATGCTGAGATGAATAAATGCAAATCTG
CTGTTCACCATGTGAGGAAGATGGAGAGAGATGTTGATACTGCATGTTTAAATGCAAAGG
ATCCCAAGCGAAAAACTTTGGCCAAAGAATTAGAGGATGAAGAAGATGTTCTAAAGCAGT
GTATTGAGAAACTTAAATTAGTTGAAGCAAATAGAGAAGCCCTTGTATCTCAATTGAAAG
AAGCACTGCATGAACAGGAATCTGAACTGGAGAATATTCGCACTCAGATGCAGGTAGCAC
ATGCACAGGCAGAGGAAGCCAGCAACATGCGGAAGCGGCTCAATGATGAAAACTTTACAG
TGGCAAAACCATCCCATGCAACTTCACCATTAGAAGCAAATGCAAAAGTAGGCCAAGCAT
CCAAGAGGACAGCTGCAGATATAGCAGCTGAGGTTGCAGACAAGCTTACAGCTTCGAGCT
CCTCTCAGTTGATCATGACTTCTGTTCTCTCAACATTTGCAGCTGAAGAGGCGAAGAATG
CCGGTCTGACAAAGACCTCTACAGTATCAAATTCTTTCACACCCATGCCCAGCAATTCAA
AACCAGAAAACTCCATGCCAGTTTCAGATCCCAATGTTTTTATGTCAACCCAGACCCTTA
CTGCTCCACCAAACCAACCATATCAATCAGTTATTATTGCCCCACCAACCATGCAGAGCC
AGACCCCAACTTCTCAAACTCAGTATCATATGCTTCCCAATCCACCTTCCCAGCAATATT
TGCAACCATCAGGAGGGATTATGAACCCATATGGTTATGGTAGCATTCCGCCCTTGCCAC
CAGGGCCACCTCCACCCCCATCTACACTACATATGGTGAATCCAATGGCTCCTTTGCCTC
AGCAGCAATCAATACCATTGGTTCAGCAGCCAGCTCTATTAACTCGTCATCAACCTATGC
CCTTGACTCAGCAACCCCCAGCACCTCCCAGTTTCCGGCCGCTTCAGCTTCCTGGAATGG
TGTATTATGGTCTCCCTCATCATTCTCAGTGAAGTTCTTTGAGCCAATGAAAGATTCCCA
TAGGGTTTTGAAATTTTTGCTTGTGCAATTGGCTCTGTTGAGATGACAAGCATGAAGAGC
TCTGACAATAATTAGGCAAATATGCATTTGGACAGCAACAGATAATGCAGGTATAAGGGT
AGCAATTTCGTTTATTTTCAGTGAATTTGTAGAGTTTATGTTCCATAGATGATGATGGTA
ATGTTAAAAGTATCTCCGGTAGTTTATGATTTTTCCTTTCTTCTGGAGATTTATACCCTG
TAAAATGATGGTTTACAGACTGCTGACGGCCCTGTATTGCAAATCAAATCAGAGAAAGGT
AATACCTTTACTTAGTTGTGTGACTCGTCAAAGGGACTTGCCTGTTGTGTTCTCCCTTGC
ATGAGACACAGTCTTTGGTTGGTTGCATCCTTCTGGCTTCAACCTTCAGCGGATTGACAA
GAGACTTAAAAAAAGTCCATTTGGGGATGATTTTTAGAGGATGAAAAGCATTTTATAATG
CTTGAAAGCAATATATATATTATTGGAATTAGGTATTAAATAAGTTTTAGAAAATTATTT
TTAAGATTTTGGTTCGTGATTATTTTTTATTATAAAACCCATTAGCTAAAATA