Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0031g01200.t01
CDS Infomation

cds chromosome:12X:7:17301685:17310131:1 gene:VIT_07s0031g01200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ribosome biogenesis protein VIT_07s0031g01200 [Source:UniProtKB/TrEMBL;Acc:F6H4N4]
Sequence

ATGGGTCACAACAAAGCTAGACGCTTCAAAGGCCACCAATCCCACAGAGGCCAAAGCAGT
AGATTCCAAGAACCTCTAAGGGAATACGACTCTCTCCCAACCGATCAAGCTGAAGAAGAG
GAGCTTTCTGTTCCGAAAGTTCAGCTTGCTATGTGGGATTTTGGACAATGTGATGCAAAA
AGGTGCACAGGACGCAAACTTTCAAGATTCGGCCTGCTGAAAGAAAGTATCCGTTTGGAG
TTGCGGGTGACTAGTGGCTTTGGTGGCATTGCTTTGAGTCCTGTTGGGAATCAATGTGTC
TCAAAAGAAGATTATATCTTAATAAAGAGAAAAGGATTAGCAGTTGTGGATTGTTCGTGG
GCACGCTTGAGTGATGTTCCTTTCACAAAGCTGCGATGTGCTGCTCCTCGCCTCCTACCA
TGGCTGGTGGCAGCAAACCCAGTAAATTATGGTCGACCATGTGAGCTCTCTTGTGTGGAA
GCATTATCTGCAGCTTTATTTATATGTGGGGAAGAGGAAACTGCAAATTTGTTGCTAGGC
AAGTTCAAATGGGGCCATGCTTTCTTGTCTCTCAACAGGGAACTCCTGAAGGCATACTCT
AAATGCGAAAACGGAGCTGAAATTATATCAGTTCAAAATGCTTGGCTTTCCCAACAAAGG
CTACAGGTCCAGAAGGCACTCCCAGATGATGAAGGAGCAGGCGTGTCATCTCAAAATGAT
GATGAAGGCTCATGCGATGATTCTGAAGACGGGCTTCCACCTCTTGAAAAGAATTTAAAT
CATCTTAACTTGGAGGAAAGCGATTCTGAAGACGGACTTCCACCTCTTGAAAAGAATTTA
AATCATCTGAACTTGGAGAAAGGGGATGAAGAAAGTGAGTAA

Peptide Sequence

PEP ID

VIT_07s0031g01200.t01
PEP Infomation

pep chromosome:12X:7:17301685:17310131:1 gene:VIT_07s0031g01200 transcript:VIT_07s0031g01200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ribosome biogenesis protein VIT_07s0031g01200 [Source:UniProtKB/TrEMBL;Acc:F6H4N4]
Sequence

MGHNKARRFKGHQSHRGQSSRFQEPLREYDSLPTDQAEEEELSVPKVQLAMWDFGQCDAK
RCTGRKLSRFGLLKESIRLELRVTSGFGGIALSPVGNQCVSKEDYILIKRKGLAVVDCSW
ARLSDVPFTKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALSAALFICGEEETANLLLG
KFKWGHAFLSLNRELLKAYSKCENGAEIISVQNAWLSQQRLQVQKALPDDEGAGVSSQND
DEGSCDDSEDGLPPLEKNLNHLNLEESDSEDGLPPLEKNLNHLNLEKGDEESE

Transcript Sequence

Transcript ID

VIT_07s0031g01200.t01
Transcript Infomation

cdna chromosome:12X:7:17301685:17310131:1 gene:VIT_07s0031g01200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ribosome biogenesis protein VIT_07s0031g01200 [Source:UniProtKB/TrEMBL;Acc:F6H4N4]
Sequence

TCGTCTGCAAAATGGGTCACAACAAAGCTAGACGCTTCAAAGGCCACCAATCCCACAGAG
GCCAAAGCAGTAGATTCCAAGAACCTCTAAGGGAATACGACTCTCTCCCAACCGATCAAG
CTGAAGAAGAGGAGCTTTCTGTTCCGAAAGTTCAGCTTGCTATGTGGGATTTTGGACAAT
GTGATGCAAAAAGGTGCACAGGACGCAAACTTTCAAGATTCGGCCTGCTGAAAGAAAGTA
TCCGTTTGGAGTTGCGGGTGACTAGTGGCTTTGGTGGCATTGCTTTGAGTCCTGTTGGGA
ATCAATGTGTCTCAAAAGAAGATTATATCTTAATAAAGAGAAAAGGATTAGCAGTTGTGG
ATTGTTCGTGGGCACGCTTGAGTGATGTTCCTTTCACAAAGCTGCGATGTGCTGCTCCTC
GCCTCCTACCATGGCTGGTGGCAGCAAACCCAGTAAATTATGGTCGACCATGTGAGCTCT
CTTGTGTGGAAGCATTATCTGCAGCTTTATTTATATGTGGGGAAGAGGAAACTGCAAATT
TGTTGCTAGGCAAGTTCAAATGGGGCCATGCTTTCTTGTCTCTCAACAGGGAACTCCTGA
AGGCATACTCTAAATGCGAAAACGGAGCTGAAATTATATCAGTTCAAAATGCTTGGCTTT
CCCAACAAAGGCTACAGGTCCAGAAGGCACTCCCAGATGATGAAGGAGCAGGCGTGTCAT
CTCAAAATGATGATGAAGGCTCATGCGATGATTCTGAAGACGGGCTTCCACCTCTTGAAA
AGAATTTAAATCATCTTAACTTGGAGGAAAGCGATTCTGAAGACGGACTTCCACCTCTTG
AAAAGAATTTAAATCATCTGAACTTGGAGAAAGGGGATGAAGAAAGTGAGTAAAATGGCC
GTAGAAAACTTTGCTACTCGGTGCAGTTATGAAAATAGTTTTGAATGATCACTGGAAAAG
GAAAAGAAAAAAAAAACACCCAGAATTGGTTGAACAGGAAAGTGTTGGACTGATGGGGAT
GGGTGAAATTGCTGAAAATGCATTTCTGAAATCTGTACCAAACACACTCCTAATATCATG
GATTGTCTTATCTTGCTTTCCTGATTTATTGGTTTTCTGTAATGGTGATTTGGATTTTCT
TTGCGATGGAATGAGATGGGTTTTT