Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0031g00040.t01
CDS Infomation

cds chromosome:12X:7:16296547:16298137:-1 gene:VIT_07s0031g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTGCTGTGTTCAACAAAGAGCTTTTGAGCTGGTACCTCATCACCCTCAAACTCAAA
GAAACTGTAGAAGCTGGGATTCCAAACTTACCAGGAACACCCACCTCTGCTAGATCAATT
GAATTATCAGAAGCCCCTCAGCATCAGCAACCAAACGATTCACTGCAGATTGTGGTCAAT
GGCGATGGACAAAATTTTGCAGAGGAAACCAATCCATCAGATTCTGAATGGGTGATCTCC
ATCAAGGAAAAACTTGAGCAAGCCCATCAAGATGATGCTGCAGATTCATGGGCAAAGCTC
TGCATCTACCGACTTCCCCACTACCTTAGAGAAGGCGATGACAAAGCCTACATCCCACAA
ATTGTCTCCTTGGGGCCTTACCACCATGGCAGAAGACGCCTTAGAAACATGGACCGGCAT
AAATGGCGATCCCTTCATCATATCCTCAAGCGCACCAATCATGACATAGAGATCTATCTG
GATGCCATGAAGGAACTTGAAGAAAAAGCTCGTGCCTGTTATGAAGGGACAATCTGTCTT
AGCAGCAATGAATTTGTGGAAATGATGGTGCTTGATGGTTGCTTCATACTGGAGCTCTTC
AGAGGCGTTGCCGGGGGATTCAAGCACCTGGGTTATGCTCGAAACGATCCCGTCTTCGCT
ATCCGTGGCTCAATGCATTCAATTCAGCGAGACATGATAATGCTTGAGAACCAAATTCCA
CTCTTTGTTCTTGAGAGGCTGCTAGGAATTCAGCTGGGCCAGCCTGAACAGAAAGGGCTT
GTAGCCAAGCTAGCACTCCGATTCTTCGACCCATTGATGCCAACAGATGAGCCATTGACA
AAAAGTGATAGGAACAGATTGGAGTCATCACTTGGATATACAACCACCTTTGACCCCTTA
GGCGACCAAGGTGGCCTTCATTGCCTTGAGGTGTTCCGAAGAAGTCTGCTGCGCACAGGA
CCGAGACCTGTTCCTAGGATTTGGATGAAGAGATGGTCACATTCCAATCGCGTTGCAGAT
AAGCGGCGACAACAGTTGATACACTGTGTGACGCAGCTTAGAGAGGCAGGGATCAAATTC
AAGAAAAGGAAGACTGATCGCTTCTGGGATATAAAATTCAAGAATGGGATTCTCAGGATT
CCTAGGCTGTTGATCCACGATGGTACTAAATCGCTCTTCCTCAACCTCATTGCGTTCGAA
CAGTGTCATCTGGATTGCAGCAATGACATTACCTCGTATGTGATATTCATGGACAGCTTG
ATCAACTCTCCGGAGGATGTGGGATACCTCCACTACTGCGGAATAATGGAGCACTGGCTT
GGCAGTGAATCGGAGGTTGCAGACCTCTTCAACCGCCTCTGTCAAGAGGTGGTTTTTGAC
ATCAATGACAGCTACCTATCATCCTTGTCGGAGCAGGTAAACAAGTATTACAACCACAGG
TGGAATGCTTGGCGTGCTAGTTTGAAGCATAACTATTTCAGCAGCCCCTGGACGATCATC
TCGTTTGTGGCTGCTGTTGTCTTATTGGCGCTCACTTTTGCACAAACCTTTTATGCAGTA
TATAGCTACTACAGGCCTGGTTGA

Peptide Sequence

PEP ID

VIT_07s0031g00040.t01
PEP Infomation

pep chromosome:12X:7:16296547:16298137:-1 gene:VIT_07s0031g00040 transcript:VIT_07s0031g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVAVFNKELLSWYLITLKLKETVEAGIPNLPGTPTSARSIELSEAPQHQQPNDSLQIVVN
GDGQNFAEETNPSDSEWVISIKEKLEQAHQDDAADSWAKLCIYRLPHYLREGDDKAYIPQ
IVSLGPYHHGRRRLRNMDRHKWRSLHHILKRTNHDIEIYLDAMKELEEKARACYEGTICL
SSNEFVEMMVLDGCFILELFRGVAGGFKHLGYARNDPVFAIRGSMHSIQRDMIMLENQIP
LFVLERLLGIQLGQPEQKGLVAKLALRFFDPLMPTDEPLTKSDRNRLESSLGYTTTFDPL
GDQGGLHCLEVFRRSLLRTGPRPVPRIWMKRWSHSNRVADKRRQQLIHCVTQLREAGIKF
KKRKTDRFWDIKFKNGILRIPRLLIHDGTKSLFLNLIAFEQCHLDCSNDITSYVIFMDSL
INSPEDVGYLHYCGIMEHWLGSESEVADLFNRLCQEVVFDINDSYLSSLSEQVNKYYNHR
WNAWRASLKHNYFSSPWTIISFVAAVVLLALTFAQTFYAVYSYYRPG

Transcript Sequence

Transcript ID

VIT_07s0031g00040.t01
Transcript Infomation

cdna chromosome:12X:7:16296547:16298137:-1 gene:VIT_07s0031g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACAAATATGGTTGCTGTGTTCAACAAAGAGCTTTTGAGCTGGTACCTCATCACCCTCAA
ACTCAAAGAAACTGTAGAAGCTGGGATTCCAAACTTACCAGGAACACCCACCTCTGCTAG
ATCAATTGAATTATCAGAAGCCCCTCAGCATCAGCAACCAAACGATTCACTGCAGATTGT
GGTCAATGGCGATGGACAAAATTTTGCAGAGGAAACCAATCCATCAGATTCTGAATGGGT
GATCTCCATCAAGGAAAAACTTGAGCAAGCCCATCAAGATGATGCTGCAGATTCATGGGC
AAAGCTCTGCATCTACCGACTTCCCCACTACCTTAGAGAAGGCGATGACAAAGCCTACAT
CCCACAAATTGTCTCCTTGGGGCCTTACCACCATGGCAGAAGACGCCTTAGAAACATGGA
CCGGCATAAATGGCGATCCCTTCATCATATCCTCAAGCGCACCAATCATGACATAGAGAT
CTATCTGGATGCCATGAAGGAACTTGAAGAAAAAGCTCGTGCCTGTTATGAAGGGACAAT
CTGTCTTAGCAGCAATGAATTTGTGGAAATGATGGTGCTTGATGGTTGCTTCATACTGGA
GCTCTTCAGAGGCGTTGCCGGGGGATTCAAGCACCTGGGTTATGCTCGAAACGATCCCGT
CTTCGCTATCCGTGGCTCAATGCATTCAATTCAGCGAGACATGATAATGCTTGAGAACCA
AATTCCACTCTTTGTTCTTGAGAGGCTGCTAGGAATTCAGCTGGGCCAGCCTGAACAGAA
AGGGCTTGTAGCCAAGCTAGCACTCCGATTCTTCGACCCATTGATGCCAACAGATGAGCC
ATTGACAAAAAGTGATAGGAACAGATTGGAGTCATCACTTGGATATACAACCACCTTTGA
CCCCTTAGGCGACCAAGGTGGCCTTCATTGCCTTGAGGTGTTCCGAAGAAGTCTGCTGCG
CACAGGACCGAGACCTGTTCCTAGGATTTGGATGAAGAGATGGTCACATTCCAATCGCGT
TGCAGATAAGCGGCGACAACAGTTGATACACTGTGTGACGCAGCTTAGAGAGGCAGGGAT
CAAATTCAAGAAAAGGAAGACTGATCGCTTCTGGGATATAAAATTCAAGAATGGGATTCT
CAGGATTCCTAGGCTGTTGATCCACGATGGTACTAAATCGCTCTTCCTCAACCTCATTGC
GTTCGAACAGTGTCATCTGGATTGCAGCAATGACATTACCTCGTATGTGATATTCATGGA
CAGCTTGATCAACTCTCCGGAGGATGTGGGATACCTCCACTACTGCGGAATAATGGAGCA
CTGGCTTGGCAGTGAATCGGAGGTTGCAGACCTCTTCAACCGCCTCTGTCAAGAGGTGGT
TTTTGACATCAATGACAGCTACCTATCATCCTTGTCGGAGCAGGTAAACAAGTATTACAA
CCACAGGTGGAATGCTTGGCGTGCTAGTTTGAAGCATAACTATTTCAGCAGCCCCTGGAC
GATCATCTCGTTTGTGGCTGCTGTTGTCTTATTGGCGCTCACTTTTGCACAAACCTTTTA
TGCAGTATATAGCTACTACAGGCCTGGTTGA