Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g06200.t01
CDS Infomation

cds chromosome:12X:7:11093802:11097518:-1 gene:VIT_07s0005g06200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAGATTGCCGTCAACCTCGTCATCGACAAGTTGCTCCCATTACTAGATCAAGAA
GCCAGACTATTGGGAGGCGTCCACACACAAGTTGAAGACATTAAAACAGAGCTACTATAT
ATTCAAGCTTTCCTAATGGATGCAGATGCAAAGGCGGAGAAAGCAGATGTCAGCCAAGGC
CTTAAAACTTGGATTCAAGACTTAAGGGAGACTGCTTATTCCATAGAAGATGTCATCGAT
GAATACTTGCTTCACTTGGGAAATCCAAATCGACGGCATGGTTTCATTGGTTTCCTTTAC
AAAGTTGCTCGCTTGATAAAAAAATTAATACGACGCCATGAGATAGCCTCCAAGATCCAT
GATATCCAGAAAAAGGTTCATAAGCTCAGAGAAATAAGTTCAAGTAATGGCTTTAATAAA
CCATTTGAATCAGGTTCAACCAGCAGCAAAGGAAGTGCTCCACAGCCTGATCCTCCAGTG
ACTTCTCTTTTCATCGACGACTCTGAAATTGTTGGCATCGGATCTCAGAAAAATGAACTG
ATAAGCAGGCTGGTGAAGGGAACTCTAAAACGAACTGTGATTTCGGTTGTCGGAATGGGT
GGACTTGGCAAAACCACTCTTGCCAAGAAGGTTTATGCAAATATGAGAGTGGTGAAACAC
TTTGATTGCCATGCTTGGATCACTGTGTCTCAGTCTTTCCAGATGAAGGAGCTGCTGCGC
CGTATGATGGAGAAATTCTATGAAGCAAGGAAGGAAAAAGTTCCTGAGGATATCAACAGA
ATGGACAACGAGTCGCTGATTACCCAAGTCAGGGAATATTTACAAGATAAGAGGTATGTG
GTTGTTTTTGACGATGTATGGAAAGCAGGATTTTGGGAAAGTATTACACCTGCGTTACCA
GAAAATAAAAAAGGCAGCAGGATAATAATCACTACCCGTAAAGATGACGTAGCCACTTGT
TGTAAGGATGATTACATCCACAGGCTGCCACATCTTTCACCTGATAGTTCCCGGGAACTC
TTTTGCAAGAAGGCATTTCAGGGTAGATGTCCCCCAGAATTAAAGAAATTGTCTGATGAT
ATTGTCAAAAGATGTGGAGGACTGCCACTAGCAATTGTAGCAATTGGTGGTCTTTTGTCA
AGAAAAGAGAAGATTGTGTCCTTATGGAAAAAATTCAAGGACTACACAATTAAATGTGGG
ATCCTTACTCGGCTGTGGATTGCTGAGGGTTTTGTAAAGACGAAGAGAGGTGTGACGCTA
GAAGAGACTGCAGAAGGATTCTTGACTGAGCTCATACGCAGGAGCTTAGTTCAAGTGTCA
GACGTATATATCGATGGAAATATTAAAAGATGCCACATTCATGACTTGATGCGTGAGATT
ATTCTCAAAAAGGCTGAGGAGTTGAGTTTTTTTTCTGTAATGGCTGGAGAAGCCTCGTGT
TTTGATGGAAGATTTAGGCGCCTATCAGTTCAGAATAGCTCAAATAATGTGCTAGACATT
CCCAGTAAAAAGTCTCACATCCGCTCCATTTTTCTTTACAACTCTGAGATGTTTTCTCTG
GGCACATTGGCTTCAAAATTTAAGTTTCTGAAAGTATTGGATCTTGGTGGTGCTCCTTTG
GAGAGAATTCCTGAAGATTTGGGAAATCTGTTGCATTTGAGATACTTAAGCCTGAGGAAG
ACAAGAGTGAGGATGCTTCCAAGGTCCATAGGCAAACTACAAAACCTACAGACTTTGGAT
CTGAAATATTCCCTTGTAGAAGATCTTCCTGTTGAGATCAATAGGCTTCAAAAGCTGTGC
AATATTCTATGCTTTGATTATGCTTATAAGGCTGATTTGAGATGGGATTCTGTTAGAGGA
GTGCATGTAAAGGAGGGTATTGGGGGTTTGGAAGACTTGCAGAAGCTGACTGCTGTGGAC
GTAACTCATGGGGTGCAGATAATAACAGAGTTGGGAAAGCTGAGGCAGTTGAGGAAGCTG
GGTATTACAAAACTTTCTAGAGGAAATGGGCAGCGTTTGTGTGCCTCCATTTCAAACATG
GTCCACCTTAAATATTTGTCTGTTTGTTCGCTGAGTGAAGATGAGATTCTGGATATACAG
TATATGTCAAATCCACCTCCGTTTCTTTCAACTGTCTACTTAATGGGGCGTTTGGAGAGG
TTACCTGACTGGATTTCTAAACTTCCAAGTTTAGTAAGAGTAATCTTAACTCGTTCTAAC
TTAGCGAACGATCCAATGCAAGTCTTTCAAGCCCTGCCTAGCCTGCAGGCGCTTTCCCTA
TTCCAAACCTCTGTCGTTGAGCAATTGTGTTTTGGGGCAACGGGGATTCAGAAACTTAAG
AGGCTCCGTATCTATGACTTGATTGGACTGAAGAGGGTGAAAATAGAAGATGGAACATTG
CCCCTTCTGGAGGAGCTTATGATTGGGCGTTGCCCACAACTGGAGGAGCTGCCCTCTGGC
ATCCGCCACCTCAAGCTAGCTAATGAAATCTTTCCAAGCAAAGATATGGGAATTCAAGTC
TCAAGCCTCAGTGCCAATAAAACTTGGAATTGGCATACAACACTAGAAGATCCAATTGCT
GGAATCTCCAATGGATTAATGGCTGAGATTGATGGTGGTGGTGTTTGTTTATTTTTACTG
AGTTTTTGTTTGAACTTAATTATCTCCTTGTCATGGTTGTTGGTCTGA

Peptide Sequence

PEP ID

VIT_07s0005g06200.t01
PEP Infomation

pep chromosome:12X:7:11093802:11097518:-1 gene:VIT_07s0005g06200 transcript:VIT_07s0005g06200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEIAVNLVIDKLLPLLDQEARLLGGVHTQVEDIKTELLYIQAFLMDADAKAEKADVSQG
LKTWIQDLRETAYSIEDVIDEYLLHLGNPNRRHGFIGFLYKVARLIKKLIRRHEIASKIH
DIQKKVHKLREISSSNGFNKPFESGSTSSKGSAPQPDPPVTSLFIDDSEIVGIGSQKNEL
ISRLVKGTLKRTVISVVGMGGLGKTTLAKKVYANMRVVKHFDCHAWITVSQSFQMKELLR
RMMEKFYEARKEKVPEDINRMDNESLITQVREYLQDKRYVVVFDDVWKAGFWESITPALP
ENKKGSRIIITTRKDDVATCCKDDYIHRLPHLSPDSSRELFCKKAFQGRCPPELKKLSDD
IVKRCGGLPLAIVAIGGLLSRKEKIVSLWKKFKDYTIKCGILTRLWIAEGFVKTKRGVTL
EETAEGFLTELIRRSLVQVSDVYIDGNIKRCHIHDLMREIILKKAEELSFFSVMAGEASC
FDGRFRRLSVQNSSNNVLDIPSKKSHIRSIFLYNSEMFSLGTLASKFKFLKVLDLGGAPL
ERIPEDLGNLLHLRYLSLRKTRVRMLPRSIGKLQNLQTLDLKYSLVEDLPVEINRLQKLC
NILCFDYAYKADLRWDSVRGVHVKEGIGGLEDLQKLTAVDVTHGVQIITELGKLRQLRKL
GITKLSRGNGQRLCASISNMVHLKYLSVCSLSEDEILDIQYMSNPPPFLSTVYLMGRLER
LPDWISKLPSLVRVILTRSNLANDPMQVFQALPSLQALSLFQTSVVEQLCFGATGIQKLK
RLRIYDLIGLKRVKIEDGTLPLLEELMIGRCPQLEELPSGIRHLKLANEIFPSKDMGIQV
SSLSANKTWNWHTTLEDPIAGISNGLMAEIDGGGVCLFLLSFCLNLIISLSWLLV

Transcript Sequence

Transcript ID

VIT_07s0005g06200.t01
Transcript Infomation

cdna chromosome:12X:7:11093802:11097518:-1 gene:VIT_07s0005g06200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAGATTGCCGTCAACCTCGTCATCGACAAGTTGCTCCCATTACTAGATCAAGAA
GCCAGACTATTGGGAGGCGTCCACACACAAGTTGAAGACATTAAAACAGAGCTACTATAT
ATTCAAGCTTTCCTAATGGATGCAGATGCAAAGGCGGAGAAAGCAGATGTCAGCCAAGGC
CTTAAAACTTGGATTCAAGACTTAAGGGAGACTGCTTATTCCATAGAAGATGTCATCGAT
GAATACTTGCTTCACTTGGGAAATCCAAATCGACGGCATGGTTTCATTGGTTTCCTTTAC
AAAGTTGCTCGCTTGATAAAAAAATTAATACGACGCCATGAGATAGCCTCCAAGATCCAT
GATATCCAGAAAAAGGTTCATAAGCTCAGAGAAATAAGTTCAAGTAATGGCTTTAATAAA
CCATTTGAATCAGGTTCAACCAGCAGCAAAGGAAGTGCTCCACAGCCTGATCCTCCAGTG
ACTTCTCTTTTCATCGACGACTCTGAAATTGTTGGCATCGGATCTCAGAAAAATGAACTG
ATAAGCAGGCTGGTGAAGGGAACTCTAAAACGAACTGTGATTTCGGTTGTCGGAATGGGT
GGACTTGGCAAAACCACTCTTGCCAAGAAGGTTTATGCAAATATGAGAGTGGTGAAACAC
TTTGATTGCCATGCTTGGATCACTGTGTCTCAGTCTTTCCAGATGAAGGAGCTGCTGCGC
CGTATGATGGAGAAATTCTATGAAGCAAGGAAGGAAAAAGTTCCTGAGGATATCAACAGA
ATGGACAACGAGTCGCTGATTACCCAAGTCAGGGAATATTTACAAGATAAGAGGTATGTG
GTTGTTTTTGACGATGTATGGAAAGCAGGATTTTGGGAAAGTATTACACCTGCGTTACCA
GAAAATAAAAAAGGCAGCAGGATAATAATCACTACCCGTAAAGATGACGTAGCCACTTGT
TGTAAGGATGATTACATCCACAGGCTGCCACATCTTTCACCTGATAGTTCCCGGGAACTC
TTTTGCAAGAAGGCATTTCAGGGTAGATGTCCCCCAGAATTAAAGAAATTGTCTGATGAT
ATTGTCAAAAGATGTGGAGGACTGCCACTAGCAATTGTAGCAATTGGTGGTCTTTTGTCA
AGAAAAGAGAAGATTGTGTCCTTATGGAAAAAATTCAAGGACTACACAATTAAATGTGGG
ATCCTTACTCGGCTGTGGATTGCTGAGGGTTTTGTAAAGACGAAGAGAGGTGTGACGCTA
GAAGAGACTGCAGAAGGATTCTTGACTGAGCTCATACGCAGGAGCTTAGTTCAAGTGTCA
GACGTATATATCGATGGAAATATTAAAAGATGCCACATTCATGACTTGATGCGTGAGATT
ATTCTCAAAAAGGCTGAGGAGTTGAGTTTTTTTTCTGTAATGGCTGGAGAAGCCTCGTGT
TTTGATGGAAGATTTAGGCGCCTATCAGTTCAGAATAGCTCAAATAATGTGCTAGACATT
CCCAGTAAAAAGTCTCACATCCGCTCCATTTTTCTTTACAACTCTGAGATGTTTTCTCTG
GGCACATTGGCTTCAAAATTTAAGTTTCTGAAAGTATTGGATCTTGGTGGTGCTCCTTTG
GAGAGAATTCCTGAAGATTTGGGAAATCTGTTGCATTTGAGATACTTAAGCCTGAGGAAG
ACAAGAGTGAGGATGCTTCCAAGGTCCATAGGCAAACTACAAAACCTACAGACTTTGGAT
CTGAAATATTCCCTTGTAGAAGATCTTCCTGTTGAGATCAATAGGCTTCAAAAGCTGTGC
AATATTCTATGCTTTGATTATGCTTATAAGGCTGATTTGAGATGGGATTCTGTTAGAGGA
GTGCATGTAAAGGAGGGTATTGGGGGTTTGGAAGACTTGCAGAAGCTGACTGCTGTGGAC
GTAACTCATGGGGTGCAGATAATAACAGAGTTGGGAAAGCTGAGGCAGTTGAGGAAGCTG
GGTATTACAAAACTTTCTAGAGGAAATGGGCAGCGTTTGTGTGCCTCCATTTCAAACATG
GTCCACCTTAAATATTTGTCTGTTTGTTCGCTGAGTGAAGATGAGATTCTGGATATACAG
TATATGTCAAATCCACCTCCGTTTCTTTCAACTGTCTACTTAATGGGGCGTTTGGAGAGG
TTACCTGACTGGATTTCTAAACTTCCAAGTTTAGTAAGAGTAATCTTAACTCGTTCTAAC
TTAGCGAACGATCCAATGCAAGTCTTTCAAGCCCTGCCTAGCCTGCAGGCGCTTTCCCTA
TTCCAAACCTCTGTCGTTGAGCAATTGTGTTTTGGGGCAACGGGGATTCAGAAACTTAAG
AGGCTCCGTATCTATGACTTGATTGGACTGAAGAGGGTGAAAATAGAAGATGGAACATTG
CCCCTTCTGGAGGAGCTTATGATTGGGCGTTGCCCACAACTGGAGGAGCTGCCCTCTGGC
ATCCGCCACCTCAAGCTAGCTAATGAAATCTTTCCAAGCAAAGATATGGGAATTCAAGTC
TCAAGCCTCAGTGCCAATAAAACTTGGAATTGGCATACAACACTAGAAGATCCAATTGCT
GGAATCTCCAATGGATTAATGGCTGAGATTGATGGTGGTGGTGTTTGTTTATTTTTACTG
AGTTTTTGTTTGAACTTAATTATCTCCTTGTCATGGTTGTTGGTCTGAACAATTTCTCTG
TTTCTCCTTCTGGGAGATGTGAATGTTTTAGAATAACATTGTTGATGACATGGCATAGGT
AATGCTCAACCAATGCTTTATGTGCATCATTAAGAA