Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g05720.t01
CDS Infomation

cds chromosome:12X:7:10001267:10009113:1 gene:VIT_07s0005g05720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAGAAAGCTCAAGAAGGAAGAGCTCAAGAAGACGAGACAAGGATCCTTTTTGTGTG
ATTCATAAGGTTCCTTCCGGGGATACTCCTTATGTTCGAGCCAAGCATGCTCAGCTAGTT
GAGAAAGATCCTGAAACAGCCATAGTATTATTTTGGAAGGCAATAAATGCAGGAGATAGA
ATAGATAGTGCCCTTAAGGACATGGCAGTGGTGATGAAACAACTAAATAGAACTGAGGAG
GCCATTGAAGCCATCAAGTCTTTTAGAGGCCTTTGCTCCAAACAAGCACAAGAACCACTG
GATAATGTCCTCATTGACTTATACAAGAAATGTGGGAGAATGGATCAACAGATTGATTTG
TTAAAGCAAAAGTTGAGGTTGATATACCAAGGAGAGGCCTTTAATGGAAAACCCACAAAG
ACTGCTCGCTCCCATGGCAAGAAGTTCCAAGTTTCTATCAAACAAGAAACTTCTAGAATA
CTAGGCAATTTGGGTTGGGCCTACATGCAAAAATCTAAGTTCATAGCAGCCGAGGTAGTG
TACAAGAAAGCTCAAATGATTGATCCAGACGCAAACAAGGCTTGCAACTTGGCCCGTTGC
CTTATTAAGCAGGCTCGAAATGTCGAGGCCCATTTGGTTCTCAATGAAGTATTGCAAGGT
AAACTCCTAGGCTCTAAAGATTGCCAAACCCAGAATCGAGCCCAAGAACTAATGTTAGAG
TTGGAGCCCAAGTGGTTGCCACCACCAGAGACAGTGAAGATTACAAGGTTTGATCTTGAA
GATGATTTTATTGATGAGCTTGAGAAGTTATTGAATGAATGGTCTCCACTTAGAACAAAG
AGGCTTCCAATCTTTGAAGAGATATCTTCATATAGAAACCAATTACCAAGCTAA

Peptide Sequence

PEP ID

VIT_07s0005g05720.t01
PEP Infomation

pep chromosome:12X:7:10001267:10009113:1 gene:VIT_07s0005g05720 transcript:VIT_07s0005g05720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQESSRRKSSRRRDKDPFCVIHKVPSGDTPYVRAKHAQLVEKDPETAIVLFWKAINAGDR
IDSALKDMAVVMKQLNRTEEAIEAIKSFRGLCSKQAQEPLDNVLIDLYKKCGRMDQQIDL
LKQKLRLIYQGEAFNGKPTKTARSHGKKFQVSIKQETSRILGNLGWAYMQKSKFIAAEVV
YKKAQMIDPDANKACNLARCLIKQARNVEAHLVLNEVLQGKLLGSKDCQTQNRAQELMLE
LEPKWLPPPETVKITRFDLEDDFIDELEKLLNEWSPLRTKRLPIFEEISSYRNQLPS

Transcript Sequence

Transcript ID

VIT_07s0005g05720.t01
Transcript Infomation

cdna chromosome:12X:7:10001267:10009113:1 gene:VIT_07s0005g05720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCGAGTTTTGAGTTGGGAGGCAAACAATCAGCTCTCATTTTTCCTTCCCAAGAAAGTGAG
AGAAAATGCAAGAAAGCTCAAGAAGGAAGAGCTCAAGAAGACGAGACAAGGATCCTTTTT
GTGTGATTCATAAGGTTCCTTCCGGGGATACTCCTTATGTTCGAGCCAAGCATGCTCAGC
TAGTTGAGAAAGATCCTGAAACAGCCATAGTATTATTTTGGAAGGCAATAAATGCAGGAG
ATAGAATAGATAGTGCCCTTAAGGACATGGCAGTGGTGATGAAACAACTAAATAGAACTG
AGGAGGCCATTGAAGCCATCAAGTCTTTTAGAGGCCTTTGCTCCAAACAAGCACAAGAAC
CACTGGATAATGTCCTCATTGACTTATACAAGAAATGTGGGAGAATGGATCAACAGATTG
ATTTGTTAAAGCAAAAGTTGAGGTTGATATACCAAGGAGAGGCCTTTAATGGAAAACCCA
CAAAGACTGCTCGCTCCCATGGCAAGAAGTTCCAAGTTTCTATCAAACAAGAAACTTCTA
GAATACTAGGCAATTTGGGTTGGGCCTACATGCAAAAATCTAAGTTCATAGCAGCCGAGG
TAGTGTACAAGAAAGCTCAAATGATTGATCCAGACGCAAACAAGGCTTGCAACTTGGCCC
GTTGCCTTATTAAGCAGGCTCGAAATGTCGAGGCCCATTTGGTTCTCAATGAAGTATTGC
AAGGTAAACTCCTAGGCTCTAAAGATTGCCAAACCCAGAATCGAGCCCAAGAACTAATGT
TAGAGTTGGAGCCCAAGTGGTTGCCACCACCAGAGACAGTGAAGATTACAAGGTTTGATC
TTGAAGATGATTTTATTGATGAGCTTGAGAAGTTATTGAATGAATGGTCTCCACTTAGAA
CAAAGAGGCTTCCAATCTTTGAAGAGATATCTTCATATAGAAACCAATTACCAAGCTAAG
GTTTCATTATTTTTG