Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_07s0005g05520.t01
CDS Infomation	cds chromosome:12X:7:9546676:9551518:-1 gene:VIT_07s0005g05520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7U3E6]
Sequence	ATGGCTGTCTCTCTGAGGTGGTTCTCGCTTTGCTCGTTGTTGGTGTTGGTGCTGTTCCTC CGCGTCAACGCCGACGAGCTTCAGAAATTGAGGGTTGAAGAAAAGCCGGACCAGTTGCAG AGCTTGGAGAACTCCACAATGGCGGAGAGGTTGGATAAAAGTGAAGGGTGGAATGAGCGG AATGAGCACGCCGTGGAAAATCCAGAGGAGGTTGCTTCCATGGTTGATATGAGCATCCGT AATAGTACGGAAAGGAGGAACCTGGGTTATTTCTCATGTGGAACTGGAAATCCCATTGAT GACTGCTGGCGCTGTGACCCACATTGGCAACTTCACCGCAAGCGCCTTGCTGACTGTGGC ATTGGCTTTGGACGCAATGCCATTGGTGGCCGGGATGGACGGTACTATGTGGTGACAGAC CCTGGTGATTACGACGCTGTCAATCCCCGACCTGGCACTCTTCGCCATGCTGTCATCCAG GACAAGCCTTTATGGATCGTGTTCAAGCGGGACATGGTGATTAAACTGAAGCAAGAGCTG ATCATGAACAGTTTCAAGACAATTGATGCTCGTGGAGTGAATGTCCACATCGCCAATGGG GCGTGCATCACCATCCAGTTTATCACCAATGTCATTATCCATGGTCTCAATATTCATGAT TGCAAGCCCACTGGCAACGCCATGGTCCGAAGCTCACCTAGCCATTATGGATGGAGGACA ATGGCCGATGGTGATGGCATTTCAATTTTTGGCTCCAGCCACATCTGGATTGATCACAAC TCCCTCTCCAACTGCGCCGATGGCCTTATTGACGCTGTGATGGGATCCACTGCCATTACC ATCTCCAACAACTACTTCACCCACCACAATGAGGTGATGCTATTGGGTCACAGTGACTCT TACACAAGAGACAAGCAGATGCAAGTGACCATTGCTTACAACCATTTCGGCGAGGGACTT ATCCAGAGAATGCCAAGGTGTAGGCATGGTTATTTCCATGTGGTAAACAACGACTATACC CACTGGGAAATGTATGCTATTGGTGGAAGTGCTGAGCCCACCATTAACAGCCAGGGCAAC AGATATCTTGCCCCTGCCAACCCCTTTGCTAAAGAGGTGACAAAGAGGGTGATCACCTCT AACAGTGTGTGGAAGCACTGGAATTGGAGATCAGAGGGAGACCTTTTGCTAAATGGGGCC TACTTCACTCCATCCGGAGCTGGGGCTGCAGCCAGCTACGCCAGAGCTTCAAGCTTAGGA GCCAAGTCCTCTTCCATGGTGGGCACCATCACATCCGGTGCCGGTGCTCTCTCCTGCCGC AGAGGCCGCCAATGCTGA

Peptide Sequence

PEP ID	VIT_07s0005g05520.t01
PEP Infomation	pep chromosome:12X:7:9546676:9551518:-1 gene:VIT_07s0005g05520 transcript:VIT_07s0005g05520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7U3E6]
Sequence	MAVSLRWFSLCSLLVLVLFLRVNADELQKLRVEEKPDQLQSLENSTMAERLDKSEGWNER NEHAVENPEEVASMVDMSIRNSTERRNLGYFSCGTGNPIDDCWRCDPHWQLHRKRLADCG IGFGRNAIGGRDGRYYVVTDPGDYDAVNPRPGTLRHAVIQDKPLWIVFKRDMVIKLKQEL IMNSFKTIDARGVNVHIANGACITIQFITNVIIHGLNIHDCKPTGNAMVRSSPSHYGWRT MADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMGSTAITISNNYFTHHNEVMLLGHSDS YTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGN RYLAPANPFAKEVTKRVITSNSVWKHWNWRSEGDLLLNGAYFTPSGAGAAASYARASSLG AKSSSMVGTITSGAGALSCRRGRQC

Transcript Sequence

Transcript ID	VIT_07s0005g05520.t01
Transcript Infomation	cdna chromosome:12X:7:9546676:9551518:-1 gene:VIT_07s0005g05520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7U3E6]
Sequence	GCTCGGTTTGTTTCCTTCTCTTTCTCAGCTTCCAAACAGAGGAAGAGAGGGATTTAGTGT GGTTCTAAAGAGGGAAAGTAGGGAGAGAAAGCTCTGAAGCTACAATGGCTGTCTCTCTGA GGTGGTTCTCGCTTTGCTCGTTGTTGGTGTTGGTGCTGTTCCTCCGCGTCAACGCCGACG AGCTTCAGAAATTGAGGGTTGAAGAAAAGCCGGACCAGTTGCAGAGCTTGGAGAACTCCA CAATGGCGGAGAGGTTGGATAAAAGTGAAGGGTGGAATGAGCGGAATGAGCACGCCGTGG AAAATCCAGAGGAGGTTGCTTCCATGGTTGATATGAGCATCCGTAATAGTACGGAAAGGA GGAACCTGGGTTATTTCTCATGTGGAACTGGAAATCCCATTGATGACTGCTGGCGCTGTG ACCCACATTGGCAACTTCACCGCAAGCGCCTTGCTGACTGTGGCATTGGCTTTGGACGCA ATGCCATTGGTGGCCGGGATGGACGGTACTATGTGGTGACAGACCCTGGTGATTACGACG CTGTCAATCCCCGACCTGGCACTCTTCGCCATGCTGTCATCCAGGACAAGCCTTTATGGA TCGTGTTCAAGCGGGACATGGTGATTAAACTGAAGCAAGAGCTGATCATGAACAGTTTCA AGACAATTGATGCTCGTGGAGTGAATGTCCACATCGCCAATGGGGCGTGCATCACCATCC AGTTTATCACCAATGTCATTATCCATGGTCTCAATATTCATGATTGCAAGCCCACTGGCA ACGCCATGGTCCGAAGCTCACCTAGCCATTATGGATGGAGGACAATGGCCGATGGTGATG GCATTTCAATTTTTGGCTCCAGCCACATCTGGATTGATCACAACTCCCTCTCCAACTGCG CCGATGGCCTTATTGACGCTGTGATGGGATCCACTGCCATTACCATCTCCAACAACTACT TCACCCACCACAATGAGGTGATGCTATTGGGTCACAGTGACTCTTACACAAGAGACAAGC AGATGCAAGTGACCATTGCTTACAACCATTTCGGCGAGGGACTTATCCAGAGAATGCCAA GGTGTAGGCATGGTTATTTCCATGTGGTAAACAACGACTATACCCACTGGGAAATGTATG CTATTGGTGGAAGTGCTGAGCCCACCATTAACAGCCAGGGCAACAGATATCTTGCCCCTG CCAACCCCTTTGCTAAAGAGGTGACAAAGAGGGTGATCACCTCTAACAGTGTGTGGAAGC ACTGGAATTGGAGATCAGAGGGAGACCTTTTGCTAAATGGGGCCTACTTCACTCCATCCG GAGCTGGGGCTGCAGCCAGCTACGCCAGAGCTTCAAGCTTAGGAGCCAAGTCCTCTTCCA TGGTGGGCACCATCACATCCGGTGCCGGTGCTCTCTCCTGCCGCAGAGGCCGCCAATGCT GA