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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g04850.t01
CDS Infomation

cds chromosome:12X:7:8110141:8111055:-1 gene:VIT_07s0005g04850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:D7U3B1]
Sequence

ATGGCCATGGCTCTTGTCGTCGGAGCTTTAGGTCAAATTGGAGGCCACCTCGATGCATGG
GGCGACGGACGTGCAACATTTTATGGTGATATTCATGGGAGTGAAACCATGTATGGAGCA
TGTGGCTATGGAAATTTATTTGAACAAGGGTATGGTCTCGAGACAACTGCGCTAAGCACA
GCGCTGTTCAACAACGGGGCGACATGTGGAGCCTGTTTTGAGCTATATTGTGTGCACTCA
AAATGGTGCATAAAGGGGGCCGGAGGCATTCGAGTGACAGCAACAAATTTTTGCCCGCCT
AGCTCTACATCCCCAAACCCCTGGTGCAATCCACCACAAAAGCACTTCGATTTGTCGCAA
TACATGTTTCTAAAGTTCGCCATATACCAAGGCGGAGTCGTGCCCGTGAAGTTCCGGAGG
GTGTATTGTTACAAGAAGGGAGGAATGAAGTTCGAGATCAAAGGAAACCCATATTGGATT
CTTGTGTTGGTGTACAATGTGGGAGGTCTGGGGGATGTTTCTAATGTGAAGGTCAAGGGT
TCAAGGACTGACTGGATACAGATGCAACGGAATTGGGGCCAGAATTGGGAAACGGGGGTT
CAATTGGTAGGCCAAGGCCTATCTTTTCAGGTGACTACTAGTGATGGTAGGATGGTGCAG
TCGGATAATATTGTCCCAACCAATTGGGAGTTTGGTCAAACATTTGAGGGGCGAAATTTT
TGA

Peptide Sequence

PEP ID

VIT_07s0005g04850.t01
PEP Infomation

pep chromosome:12X:7:8110141:8111055:-1 gene:VIT_07s0005g04850 transcript:VIT_07s0005g04850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:D7U3B1]
Sequence

MAMALVVGALGQIGGHLDAWGDGRATFYGDIHGSETMYGACGYGNLFEQGYGLETTALST
ALFNNGATCGACFELYCVHSKWCIKGAGGIRVTATNFCPPSSTSPNPWCNPPQKHFDLSQ
YMFLKFAIYQGGVVPVKFRRVYCYKKGGMKFEIKGNPYWILVLVYNVGGLGDVSNVKVKG
SRTDWIQMQRNWGQNWETGVQLVGQGLSFQVTTSDGRMVQSDNIVPTNWEFGQTFEGRNF

Transcript Sequence

Transcript ID

VIT_07s0005g04850.t01
Transcript Infomation

cdna chromosome:12X:7:8110141:8111055:-1 gene:VIT_07s0005g04850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:D7U3B1]
Sequence

CTTTAACCATGACTAGTCTTAGCTTTCTAGTTTCGAGTTTCATGGCCATGGCTCTTGTCG
TCGGAGCTTTAGGTCAAATTGGAGGCCACCTCGATGCATGGGGCGACGGACGTGCAACAT
TTTATGGTGATATTCATGGGAGTGAAACCATGTATGGAGCATGTGGCTATGGAAATTTAT
TTGAACAAGGGTATGGTCTCGAGACAACTGCGCTAAGCACAGCGCTGTTCAACAACGGGG
CGACATGTGGAGCCTGTTTTGAGCTATATTGTGTGCACTCAAAATGGTGCATAAAGGGGG
CCGGAGGCATTCGAGTGACAGCAACAAATTTTTGCCCGCCTAGCTCTACATCCCCAAACC
CCTGGTGCAATCCACCACAAAAGCACTTCGATTTGTCGCAATACATGTTTCTAAAGTTCG
CCATATACCAAGGCGGAGTCGTGCCCGTGAAGTTCCGGAGGGTGTATTGTTACAAGAAGG
GAGGAATGAAGTTCGAGATCAAAGGAAACCCATATTGGATTCTTGTGTTGGTGTACAATG
TGGGAGGTCTGGGGGATGTTTCTAATGTGAAGGTCAAGGGTTCAAGGACTGACTGGATAC
AGATGCAACGGAATTGGGGCCAGAATTGGGAAACGGGGGTTCAATTGGTAGGCCAAGGCC
TATCTTTTCAGGTGACTACTAGTGATGGTAGGATGGTGCAGTCGGATAATATTGTCCCAA
CCAATTGGGAGTTTGGTCAAACATTTGAGGGGCGAAATTTTTGAAAGTGATGTACTTGTT
GTGTTGCCTTGAAGATTATGTGACTAAAAATGGAATTTATCTCATGTTTGGAACTAATAA
A