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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g04400.t01
CDS Infomation

cds chromosome:12X:7:7492159:7493925:1 gene:VIT_07s0005g04400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II reaction center Psb28 protein [Source:UniProtKB/TrEMBL;Acc:D7U379]
Sequence

ATGGCAGCTCTGCAGTCCCTTGCATTCACCTCTCCACTGTCTCACTGTTGCAAGCAATCT
CCTCTCTCGGGCTTGAGTTCTTGGGCTGTTCACAGAAGTGCACATTCATCATTCAATGGC
CGGTCTTTGCACCTGCCTCGTCCACAGTGGGCTGCACTCAAACGAAGTTCATCAACATCT
GGACTCATTACAATGATGGTCAAACCAACAATTCAATTCATCCAAGGAACTGATGAACAG
ACAGTACCAGATGTGAGGCTGACCCAATCAAGAGATGGCACAAATGGTATGGCTATATTC
AAGTTCGAACAGCCCTCTGTTTTTGACTCATCTGGAGAAGTTGGAGATATCACTGGCTTT
TACATGATTGATGAGGAAGGGGTTCTCCAGTCAGTTGATGTAAGTGCCAAGTTCATCAAT
GGAAAGCCTTCAGGAATTGAAGCAAAGTATGTGATGCGCAGCCCACGAGAGTGGGACAGG
TTCATGAGATTCATGGAGCGATATTCAAATGAGAATGGGTTGCAATTCGTCAAAAAATGA

Peptide Sequence

PEP ID

VIT_07s0005g04400.t01
PEP Infomation

pep chromosome:12X:7:7492159:7493925:1 gene:VIT_07s0005g04400 transcript:VIT_07s0005g04400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II reaction center Psb28 protein [Source:UniProtKB/TrEMBL;Acc:D7U379]
Sequence

MAALQSLAFTSPLSHCCKQSPLSGLSSWAVHRSAHSSFNGRSLHLPRPQWAALKRSSSTS
GLITMMVKPTIQFIQGTDEQTVPDVRLTQSRDGTNGMAIFKFEQPSVFDSSGEVGDITGF
YMIDEEGVLQSVDVSAKFINGKPSGIEAKYVMRSPREWDRFMRFMERYSNENGLQFVKK

Transcript Sequence

Transcript ID

VIT_07s0005g04400.t01
Transcript Infomation

cdna chromosome:12X:7:7492159:7493925:1 gene:VIT_07s0005g04400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II reaction center Psb28 protein [Source:UniProtKB/TrEMBL;Acc:D7U379]
Sequence

TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCTTTTTCTCTGTTTCTGTCATTCT
GTCTGTGTCTTCAATGGCAGCTCTGCAGTCCCTTGCATTCACCTCTCCACTGTCTCACTG
TTGCAAGCAATCTCCTCTCTCGGGCTTGAGTTCTTGGGCTGTTCACAGAAGTGCACATTC
ATCATTCAATGGCCGGTCTTTGCACCTGCCTCGTCCACAGTGGGCTGCACTCAAACGAAG
TTCATCAACATCTGGACTCATTACAATGATGGTCAAACCAACAATTCAATTCATCCAAGG
AACTGATGAACAGACAGTACCAGATGTGAGGCTGACCCAATCAAGAGATGGCACAAATGG
TATGGCTATATTCAAGTTCGAACAGCCCTCTGTTTTTGACTCATCTGGAGAAGTTGGAGA
TATCACTGGCTTTTACATGATTGATGAGGAAGGGGTTCTCCAGTCAGTTGATGTAAGTGC
CAAGTTCATCAATGGAAAGCCTTCAGGAATTGAAGCAAAGTATGTGATGCGCAGCCCACG
AGAGTGGGACAGGTTCATGAGATTCATGGAGCGATATTCAAATGAGAATGGGTTGCAATT
CGTCAAAAAATGAGGCAATGTATATCCTTCATTCCATCTTATTCTTCCACTTTCATCTGC
CACCAAGTTGGGTTTCTTTTTATAATTTAGTTGAAATTTGAGAAACTTGGTTGATGCCCA
TTTTTATTTGATGCAACTACTGTATTCTCCATCTATGATAATTCAACAAGCTTCAATGTT
TTTGCAAAA