Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g04380.t01
CDS Infomation

cds chromosome:12X:7:7467838:7475020:1 gene:VIT_07s0005g04380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HZR1]
Sequence

ATGGATGGTGGTAGTGGAGGAGGAGTGTGTACAAGTGGGTCGATGTCCACTGTGTCCAAA
GAGGACAACTTGATGGTGTCCACTGAGGTTTCTTCATACCCAGATGAAGCAGAGCTTGAG
TTGGGTCTTGGATTGAGCCTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTCAAGCCTCAA
GAACAGGGGTGGGCTCAGTATGGAAGGATCTTGACTGCTAAGGACTTTCCTTCTACAGTT
TCATCTTCATCTTCATCCTCTTCTTCACTGAGCAGAGCTAATAGAACAACAGTTGGTACC
AAGAGAAGAGCTGATTCCGTGGCAGCTTCCAATAATGGCAGTCAGGTTGTGGGATGGCCC
CCTATCAGAGCTTATAGGATGAACAGCTTGGCTAACCAGTCAAAATCACTGGTCACTGAA
GACTTGAATTCAATGGTTGAGAAAAGTAAAAGTACAAACACAATGGTAGAGAACACTTAT
AACGGAAGCAACAACACCAATGGTTATGCTAAGAAGAAAGGGCCCCTCAATACTTCGTTC
TTTGTGAAAGTGAATATGGATGGAATTCCAATTGGAAGGAAGGTTGATCTGAGTGCTCAT
AGTTGCTACGAGACATTAGCAAAAACATTGGAGGAGATGTTTCAGGGACCAACCACAACT
GTCAATGCAATAGGGTCTAGCAATGAGAATTATGATGCAATGACAGAATCAACAAGACCC
TCAAAATTACTGGATGGTTCATCTGACTTTGTGCTCACCTATGAAGACAAGGAGGGAGAC
TGGATGCTGGTTGGAGATGTTCCTTGGGGGATGTTCCTGGGCTCTGCGAGGAGGCTCAGA
ATCATGAGGACATCTGATGCTAATGGACTTGCTCCAAGGATCCAAGAAAGAAATGGGAGA
CAAAGAAGCATGCGAATCTAA

Peptide Sequence

PEP ID

VIT_07s0005g04380.t01
PEP Infomation

pep chromosome:12X:7:7467838:7475020:1 gene:VIT_07s0005g04380 transcript:VIT_07s0005g04380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HZR1]
Sequence

MDGGSGGGVCTSGSMSTVSKEDNLMVSTEVSSYPDEAELELGLGLSLGGGGGGGGGVKPQ
EQGWAQYGRILTAKDFPSTVSSSSSSSSSLSRANRTTVGTKRRADSVAASNNGSQVVGWP
PIRAYRMNSLANQSKSLVTEDLNSMVEKSKSTNTMVENTYNGSNNTNGYAKKKGPLNTSF
FVKVNMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTTTVNAIGSSNENYDAMTESTRP
SKLLDGSSDFVLTYEDKEGDWMLVGDVPWGMFLGSARRLRIMRTSDANGLAPRIQERNGR
QRSMRI

Transcript Sequence

Transcript ID

VIT_07s0005g04380.t01
Transcript Infomation

cdna chromosome:12X:7:7467838:7475020:1 gene:VIT_07s0005g04380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HZR1]
Sequence

TTTCAATGGATGGTGGTAGTGGAGGAGGAGTGTGTACAAGTGGGTCGATGTCCACTGTGT
CCAAAGAGGACAACTTGATGGTGTCCACTGAGGTTTCTTCATACCCAGATGAAGCAGAGC
TTGAGTTGGGTCTTGGATTGAGCCTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTCAAGC
CTCAAGAACAGGGGTGGGCTCAGTATGGAAGGATCTTGACTGCTAAGGACTTTCCTTCTA
CAGTTTCATCTTCATCTTCATCCTCTTCTTCACTGAGCAGAGCTAATAGAACAACAGTTG
GTACCAAGAGAAGAGCTGATTCCGTGGCAGCTTCCAATAATGGCAGTCAGGTTGTGGGAT
GGCCCCCTATCAGAGCTTATAGGATGAACAGCTTGGCTAACCAGTCAAAATCACTGGTCA
CTGAAGACTTGAATTCAATGGTTGAGAAAAGTAAAAGTACAAACACAATGGTAGAGAACA
CTTATAACGGAAGCAACAACACCAATGGTTATGCTAAGAAGAAAGGGCCCCTCAATACTT
CGTTCTTTGTGAAAGTGAATATGGATGGAATTCCAATTGGAAGGAAGGTTGATCTGAGTG
CTCATAGTTGCTACGAGACATTAGCAAAAACATTGGAGGAGATGTTTCAGGGACCAACCA
CAACTGTCAATGCAATAGGGTCTAGCAATGAGAATTATGATGCAATGACAGAATCAACAA
GACCCTCAAAATTACTGGATGGTTCATCTGACTTTGTGCTCACCTATGAAGACAAGGAGG
GAGACTGGATGCTGGTTGGAGATGTTCCTTGGGGGATGTTCCTGGGCTCTGCGAGGAGGC
TCAGAATCATGAGGACATCTGATGCTAATGGACTTGCTCCAAGGATCCAAGAAAGAAATG
GGAGACAAAGAAGCATGCGAATCTAAATCTTATTTTTGTTGATCATCTTCTGGAAAAGGA
AAACTACCCATGGCTTGAAACGTAAAATATAAGGAGAGAAACACATAATTAGTCAAGGCA
CTTTGCCAAGAAATGAATGCTGATCATCCACAGCCCGTCTGTATGTTTTGGTTTCTGCAT
TTACTTTTATTCTTTTGCGTACTGTTTTCACCCATTGTTGGGTAATTATAGCCTTTATTT
TTGTTTCATTGAAAGGCATAAAAATCTCAGTATTCAGTGTCATATACACAGTGCATACTT
GAATGGTGTGCTACTATGCAA