Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g03780.t01
CDS Infomation

cds chromosome:12X:7:6757453:6760675:1 gene:VIT_07s0005g03780 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long-chain-alcohol oxidase [Source:UniProtKB/TrEMBL;Acc:F6HZM3]
Sequence

ATGGGGAAGGAGAGCAATAGAGAAGAGGGGCATGGCCATCCATTACTGAGAGGTGGATGG
AGGAAAGGCAGTTACAGCCATGGCTTCTCTTCGTCTCAGATTCAGGCACTGGCTTCCATC
TGTGAGACTCTCATTCCTCCTCTGCATTTGGAATCCATCAGCAAAGAAAACCCACCAGAG
GCCCTTTATTCCTTCTACAAAGCTTCTGGGTCTCAGTTTCCAGTCCCGGATGAGGCTGCA
GAGCTTTTGAAGAAGAGGGGTTTGCCAGAAGGTGTGATGTTAGTGAGCATAGTGCTGAAG
ATTCTCTCAACCAGATTGGGGACATTGTTGCTTTGTGGGTTTCTTTGTTTGGGTTGGAAA
TGGCCATTCATTCTCAAGTTCTCTGAAATTTCCTTGGAGAAGAGAGAACAAGTTCTCAAG
AATTGGTCACGCCAAAGGTTTCTGTTTCCCTTAAGATTATTCTTTGCGATAATGAAAATC
TTCTGTTTCTTCATCTTCTTCTCTCGGACTGATGATAATTTGGAAAACCCTGCATGGGAT
GCAATCGGATACCATGTGGAGACCAAAGAATATGTAAAGAAACCTCCAAAGGAGAGGCCT
ATTCGGAAGGGGATTGTAGAAACTATGTATGAAAATGACTCTACCCTGGTCCAATCCCTC
TCCCAGAGAGGTATCAAAGTTATAGAAGATCAAAAAAATATCTGCAAGATCAAATGTGAT
GTTGTAATCATTGGCTCTGGTTGCGGGGGAGGAGTTACTGCTGCTGTTCTCGCAAGCTCT
GGCTATAAAGTTCTCATCCTTGAGAAAGGGAACTATTTTGAACCAGAAGATTATTCGTCT
CTGGAAGGCCCCTCCATGAGTGAGCAATACGAATCAGGCGGGGTTATGTCAACTATTGAT
GCAAAAGTGATGATCTTGGCAGGATCAACAGTGGGTGGAGGCTCTGCTGTAAACTGGTCT
GCAGCCATTAAAACACCAAATTCCATTCTCAGGGAGTGGTCAACAGATCATAAGCTCCCT
CTTTTTGGGAGCTCTGAATACCTATCTGCCATGGACACTGTGTGGAAGAGGATTGGTGTG
ACAGAGAAGTGTACAGAGGAAGGGTTTCAGAACCAGGTTCTGAGAAAAGGGTGTGAAAAT
CTTGGCTTGGACGTTGAATCAATTCCAAGGAATTCCTCGGAGAATCATTACTGTGGTTCT
TGTGCTTATGGTTGTACGAGAGGAGACAAACAAGGGACTCAGTCTACTTGGCTGGTTGAT
GCCGTGGGCTGCGGTGCAGTGATCTTAACAGGATGCAAAGCTGAGAAACTCATCTTTAAG
GAGAAAAAGAATGGTAGAAAAAGAAGGAAATGCTCAGGAGTGATTGTAGCATCTTCTAGC
AAGAATGTCACAAAGAAACTGCAAATTGAAGCTAGAGTAACTGTTTCAGCTTGTGGATCT
CTATTAACACCCCCTCTACTTCTCTCCAGCGGACTGGAGAATCCACACATCGGCAAGAAC
CTTCATCTCCACCCTGTACTAATGGTTTGGGGATACTTCCCAGAGTCCCAATCAGGAATC
AAAGGCAAATGTTTTGAGGGAGGACTCCTTACTTCACTCCACAAGGTGGTTTCAGAGGAA
TCCAGAGTACAGGCAATAGTAGAACCTACTGCACTGGGACCTGCCTCATTTGCTGCAATA
CATCCCTGGGTTTCAGGACTTGACATGAAGGAAAGAATGGTGAAGTACTCCAGAACTGCT
ACACTTTTTGCGTTGGCTAGAGATAAGGGTGCAGGAGAAGTAAAGGTGGAACGCAGGATA
AAATATCGGTTACATCCAGCTGATAAAGAAAATCTCAGGGTGGGGCTGAGGCAGGCTTTG
AGGATTTTGATAGCGGCAGGAGCTGTTGAAGTGGGCACCTACAGGAGTGATGGACAGAGT
ATCAAATGTAAAGGGGTTAAAGAAGAGGCTGTGGAGGAGTTTTTGGATGGGGTAGTGGCT
GGAGGAGGGCCGTGCTCGCGGGGAGACCACTGGACCTTGTATTGTTCTGCCCATCAGATG
GGAAGTTGCAGGATGGGTGCTACAGAGGAAGAAGGTGCAGTTGATGAAAATGGGGAAACT
TGGGAGGCAAAGGGCCTATTTGTATGTGATGGAAGTGTTCTTCCTAGTGCAGTTGGGATC
AATCCAATGATTACCATCCAGACAACTGCTTATTGCATCTCAAAGAGGATTGCAGAGTCC
TTGAAGAAACAAGAATTTCTGGCAGACTGA

Peptide Sequence

PEP ID

VIT_07s0005g03780.t01
PEP Infomation

pep chromosome:12X:7:6757453:6760675:1 gene:VIT_07s0005g03780 transcript:VIT_07s0005g03780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long-chain-alcohol oxidase [Source:UniProtKB/TrEMBL;Acc:F6HZM3]
Sequence

MGKESNREEGHGHPLLRGGWRKGSYSHGFSSSQIQALASICETLIPPLHLESISKENPPE
ALYSFYKASGSQFPVPDEAAELLKKRGLPEGVMLVSIVLKILSTRLGTLLLCGFLCLGWK
WPFILKFSEISLEKREQVLKNWSRQRFLFPLRLFFAIMKIFCFFIFFSRTDDNLENPAWD
AIGYHVETKEYVKKPPKERPIRKGIVETMYENDSTLVQSLSQRGIKVIEDQKNICKIKCD
VVIIGSGCGGGVTAAVLASSGYKVLILEKGNYFEPEDYSSLEGPSMSEQYESGGVMSTID
AKVMILAGSTVGGGSAVNWSAAIKTPNSILREWSTDHKLPLFGSSEYLSAMDTVWKRIGV
TEKCTEEGFQNQVLRKGCENLGLDVESIPRNSSENHYCGSCAYGCTRGDKQGTQSTWLVD
AVGCGAVILTGCKAEKLIFKEKKNGRKRRKCSGVIVASSSKNVTKKLQIEARVTVSACGS
LLTPPLLLSSGLENPHIGKNLHLHPVLMVWGYFPESQSGIKGKCFEGGLLTSLHKVVSEE
SRVQAIVEPTALGPASFAAIHPWVSGLDMKERMVKYSRTATLFALARDKGAGEVKVERRI
KYRLHPADKENLRVGLRQALRILIAAGAVEVGTYRSDGQSIKCKGVKEEAVEEFLDGVVA
GGGPCSRGDHWTLYCSAHQMGSCRMGATEEEGAVDENGETWEAKGLFVCDGSVLPSAVGI
NPMITIQTTAYCISKRIAESLKKQEFLAD

Transcript Sequence

Transcript ID

VIT_07s0005g03780.t01
Transcript Infomation

cdna chromosome:12X:7:6757453:6760675:1 gene:VIT_07s0005g03780 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long-chain-alcohol oxidase [Source:UniProtKB/TrEMBL;Acc:F6HZM3]
Sequence

AGAGATGGGGAAGGAGAGCAATAGAGAAGAGGGGCATGGCCATCCATTACTGAGAGGTGG
ATGGAGGAAAGGCAGTTACAGCCATGGCTTCTCTTCGTCTCAGATTCAGGCACTGGCTTC
CATCTGTGAGACTCTCATTCCTCCTCTGCATTTGGAATCCATCAGCAAAGAAAACCCACC
AGAGGCCCTTTATTCCTTCTACAAAGCTTCTGGGTCTCAGTTTCCAGTCCCGGATGAGGC
TGCAGAGCTTTTGAAGAAGAGGGGTTTGCCAGAAGGTGTGATGTTAGTGAGCATAGTGCT
GAAGATTCTCTCAACCAGATTGGGGACATTGTTGCTTTGTGGGTTTCTTTGTTTGGGTTG
GAAATGGCCATTCATTCTCAAGTTCTCTGAAATTTCCTTGGAGAAGAGAGAACAAGTTCT
CAAGAATTGGTCACGCCAAAGGTTTCTGTTTCCCTTAAGATTATTCTTTGCGATAATGAA
AATCTTCTGTTTCTTCATCTTCTTCTCTCGGACTGATGATAATTTGGAAAACCCTGCATG
GGATGCAATCGGATACCATGTGGAGACCAAAGAATATGTAAAGAAACCTCCAAAGGAGAG
GCCTATTCGGAAGGGGATTGTAGAAACTATGTATGAAAATGACTCTACCCTGGTCCAATC
CCTCTCCCAGAGAGGTATCAAAGTTATAGAAGATCAAAAAAATATCTGCAAGATCAAATG
TGATGTTGTAATCATTGGCTCTGGTTGCGGGGGAGGAGTTACTGCTGCTGTTCTCGCAAG
CTCTGGCTATAAAGTTCTCATCCTTGAGAAAGGGAACTATTTTGAACCAGAAGATTATTC
GTCTCTGGAAGGCCCCTCCATGAGTGAGCAATACGAATCAGGCGGGGTTATGTCAACTAT
TGATGCAAAAGTGATGATCTTGGCAGGATCAACAGTGGGTGGAGGCTCTGCTGTAAACTG
GTCTGCAGCCATTAAAACACCAAATTCCATTCTCAGGGAGTGGTCAACAGATCATAAGCT
CCCTCTTTTTGGGAGCTCTGAATACCTATCTGCCATGGACACTGTGTGGAAGAGGATTGG
TGTGACAGAGAAGTGTACAGAGGAAGGGTTTCAGAACCAGGTTCTGAGAAAAGGGTGTGA
AAATCTTGGCTTGGACGTTGAATCAATTCCAAGGAATTCCTCGGAGAATCATTACTGTGG
TTCTTGTGCTTATGGTTGTACGAGAGGAGACAAACAAGGGACTCAGTCTACTTGGCTGGT
TGATGCCGTGGGCTGCGGTGCAGTGATCTTAACAGGATGCAAAGCTGAGAAACTCATCTT
TAAGGAGAAAAAGAATGGTAGAAAAAGAAGGAAATGCTCAGGAGTGATTGTAGCATCTTC
TAGCAAGAATGTCACAAAGAAACTGCAAATTGAAGCTAGAGTAACTGTTTCAGCTTGTGG
ATCTCTATTAACACCCCCTCTACTTCTCTCCAGCGGACTGGAGAATCCACACATCGGCAA
GAACCTTCATCTCCACCCTGTACTAATGGTTTGGGGATACTTCCCAGAGTCCCAATCAGG
AATCAAAGGCAAATGTTTTGAGGGAGGACTCCTTACTTCACTCCACAAGGTGGTTTCAGA
GGAATCCAGAGTACAGGCAATAGTAGAACCTACTGCACTGGGACCTGCCTCATTTGCTGC
AATACATCCCTGGGTTTCAGGACTTGACATGAAGGAAAGAATGGTGAAGTACTCCAGAAC
TGCTACACTTTTTGCGTTGGCTAGAGATAAGGGTGCAGGAGAAGTAAAGGTGGAACGCAG
GATAAAATATCGGTTACATCCAGCTGATAAAGAAAATCTCAGGGTGGGGCTGAGGCAGGC
TTTGAGGATTTTGATAGCGGCAGGAGCTGTTGAAGTGGGCACCTACAGGAGTGATGGACA
GAGTATCAAATGTAAAGGGGTTAAAGAAGAGGCTGTGGAGGAGTTTTTGGATGGGGTAGT
GGCTGGAGGAGGGCCGTGCTCGCGGGGAGACCACTGGACCTTGTATTGTTCTGCCCATCA
GATGGGAAGTTGCAGGATGGGTGCTACAGAGGAAGAAGGTGCAGTTGATGAAAATGGGGA
AACTTGGGAGGCAAAGGGCCTATTTGTATGTGATGGAAGTGTTCTTCCTAGTGCAGTTGG
GATCAATCCAATGATTACCATCCAGACAACTGCTTATTGCATCTCAAAGAGGATTGCAGA
GTCCTTGAAGAAACAAGAATTTCTGGCAGACTGACTGACTGACTGATTGATTTCATCCCT
TCTTTTGTCTGCCCTTCTTTGTCCTCTTTTAAGGGTTCTTGATTGTAATAAGCTGATTGC
ATTATCTTAAGAAGTAAGGTAAAATAAAGGAGAAGCCTAAGAATAAGCTAGTTGGGAA