Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_07s0005g03520.t01
CDS Infomation	cds chromosome:12X:7:6412350:6416250:1 gene:VIT_07s0005g03520 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HZL0]
Sequence	ATGGACACTAAGTCTGTACGATGTCTTATTAACAGCATTTCTCGGTTCATCCATCTGGTT TCATGCCAGACACTGAAACCTATGCCCATTCAAAAGGATTGCAGAAATATGGTCGGCTTA TTGAAGCTTTTGAAACCGGTGCTTGATGATGTTGTTAATTGCAAAATACCATCAGATGAA ATTCTATTTAAAGAATGCGAAGAGTTGGATATGGCTGTTAATGAGGCTAGGGAGTTTGTG GAGAATTGGTGCCCAAAGATGAGCAAGATTTTCAGTGTTCTACAGAGTGAGCAATTGGTG ATGAAAATCCAGAGCTCTTCCCTGGAGATTTGTTTTATATTGTGTAGATTGTTACATTCG TCTCCATCTGTGTCAAATTTAACCAGCATTCAGCACTGTATGCAGAAACTTCAACATTTA GAGCAGAAAAGAATATCAGAATACATAGAACAGGCTCTGAGAAGTCAAAGAGATGAGATA ATTCCTCATACTCAACAGCTAGCTAAAATTATTGAGTCCCTTAGTTTGACATCAAAGCAG GAATTGCTGAAAGAGAGTGTGGCTGTGGAAAGGGAGAGAATGAATGCCCAAGTCAATAAA ACAGCATATGAATTAGACCAAATCAATCAAATTGTGGAACTCGTCTCCCATATTCGTGAT TGCATGGTTAGACTTGGGGGATTTGAAGCTATAAATGGTGTCCGAATACCTTCATATTTC CGCTGCCCATTGTCTTTGGAACTCATGATGGATCCTGTGATTGTGGCATCTGGTCAGACC TATGAGAGGTCTTCCATCCAAAAATGGCTCGATCAAGGGTTGATGATTTGCCCAAAAACC CGTCAAACTCTTGCACATGCAAATCTCATCCCCAATTACACTGTGAAAGCTTTGATAGAG AATTGGTGTGAGGAAAACAATATAACACTTTCTGGGACTTCCGAGCATACTAATATAACC CCAGTTCCATCCCCATTGGATCATGTATCTGCTCAAGATGTCATTGGAATGGATAGTTTC CGTTGTTCCATACACAGTAGCAATTGTACATCAAGATCCTCTTTGGAAGTTGGAAATGGA ATTGAGAAATTAAAGGTTGATGTCTCCACCAGATTTGGTGGGGAAGAATCCAATGTATGC AAGAGTAGGGAACCTGAAAAGTTGGAGCGACAATCCCCTGAACAGTCATATATTCACAGC AGGACTGAATCAACCTCAAGTGCTGTTTCCAGTATTGATTCCTTACCTACCGCGTCAACT GAATTGTCAAGGATATCCAATAAACAAGAAAATGGGACAGGGCTGTCTGGAGAAATCACA TCGGAGTGTCACGCTTCTCCTTCAAATAGAGATTTGGAATTCTCTCCATGGTTTTCTGGA AAACAATTTCATAGCTCCAAAACAAAAGTGGAAATGGTCAGCAATGGAAAATGTGGCCCC CCGAGAATTCTATCCCTTCCATTTTCCGACCCAAAATTTGATGATTTGACCACCTCTTCC CATGTTGAGAAACTGGTTGAAGATCTAAAGAGTCAATCAAATGAATTGCAAACTGTAGCT GCATCGGAATTGAGGCTTCTGGCAAAGCACAACATGGAGAACCGCATTATTATAGGCCGT TGTGGGGCTATTGCACCATTAGTTTTACTTCTATACTCAGAAGTGAAGCAAACCCAAGAG AATGCCGTCACAGCTCTCTTGAATCTATCCATTAATGATGCAAATAAGGTCATTATTGCA GAAGCTGGAGCTATAGAATCTCTTATCCATGTTCTGAAATCAGGAAATGCTGGAGCCAAA GAAAACTCTGCAGCAACTCTGTTTAGCCTGTCTGTTTTAGAAGAATACAAAGCTAAGATT GGATGTTCTGGTGCAGTTAAAGCCTTGGTGGATCTTCTGGGCTCAGGGACTCTCAGAGGG AAGAAAGATGCTGCTACTGCATTGTTTAACCTATCAATATGCCATGAAAATAAGCCTCGT ATAATTCAAGCAGGAGCTGTGAAGTATCTTGTTCAATTGATGGAACCTGCTACAGGAATG GTTGACAAGGCTGTTGCTCTTCTTGCAAACCTGTCAATAATTTCAGAGGGACGCTTTGCA ATTGTACGGGAAGGGGGCATTCCCTTGTTGGTTGAGCTTGTCGAAACAGGATCAGTGCGA GGAAAGGAAAATGCTGCCTCCATACTATTGCAACTATGCATTAACAGTCCCAAATTTTGT ACCCTGGTTCTGCAAGAAGGAGCCATCCCACCCCTTGTTGCCTTATCTCAGTCTGGCACA CCGAGAGCCAAGGAGAAGGCACAGCAGCTTCTCAGTCACTTCAGGAACCAGCGAGAAGGG GCTGCAGCGAAGGGAAAATCATGA

Peptide Sequence

PEP ID	VIT_07s0005g03520.t01
PEP Infomation	pep chromosome:12X:7:6412350:6416250:1 gene:VIT_07s0005g03520 transcript:VIT_07s0005g03520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HZL0]
Sequence	MDTKSVRCLINSISRFIHLVSCQTLKPMPIQKDCRNMVGLLKLLKPVLDDVVNCKIPSDE ILFKECEELDMAVNEAREFVENWCPKMSKIFSVLQSEQLVMKIQSSSLEICFILCRLLHS SPSVSNLTSIQHCMQKLQHLEQKRISEYIEQALRSQRDEIIPHTQQLAKIIESLSLTSKQ ELLKESVAVERERMNAQVNKTAYELDQINQIVELVSHIRDCMVRLGGFEAINGVRIPSYF RCPLSLELMMDPVIVASGQTYERSSIQKWLDQGLMICPKTRQTLAHANLIPNYTVKALIE NWCEENNITLSGTSEHTNITPVPSPLDHVSAQDVIGMDSFRCSIHSSNCTSRSSLEVGNG IEKLKVDVSTRFGGEESNVCKSREPEKLERQSPEQSYIHSRTESTSSAVSSIDSLPTAST ELSRISNKQENGTGLSGEITSECHASPSNRDLEFSPWFSGKQFHSSKTKVEMVSNGKCGP PRILSLPFSDPKFDDLTTSSHVEKLVEDLKSQSNELQTVAASELRLLAKHNMENRIIIGR CGAIAPLVLLLYSEVKQTQENAVTALLNLSINDANKVIIAEAGAIESLIHVLKSGNAGAK ENSAATLFSLSVLEEYKAKIGCSGAVKALVDLLGSGTLRGKKDAATALFNLSICHENKPR IIQAGAVKYLVQLMEPATGMVDKAVALLANLSIISEGRFAIVREGGIPLLVELVETGSVR GKENAASILLQLCINSPKFCTLVLQEGAIPPLVALSQSGTPRAKEKAQQLLSHFRNQREG AAAKGKS

Transcript Sequence

Transcript ID	VIT_07s0005g03520.t01
Transcript Infomation	cdna chromosome:12X:7:6412350:6416250:1 gene:VIT_07s0005g03520 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6HZL0]
Sequence	ATCAAAACAGGTCAGATGGACACTAAGTCTGTACGATGTCTTATTAACAGCATTTCTCGG TTCATCCATCTGGTTTCATGCCAGACACTGAAACCTATGCCCATTCAAAAGGATTGCAGA AATATGGTCGGCTTATTGAAGCTTTTGAAACCGGTGCTTGATGATGTTGTTAATTGCAAA ATACCATCAGATGAAATTCTATTTAAAGAATGCGAAGAGTTGGATATGGCTGTTAATGAG GCTAGGGAGTTTGTGGAGAATTGGTGCCCAAAGATGAGCAAGATTTTCAGTGTTCTACAG AGTGAGCAATTGGTGATGAAAATCCAGAGCTCTTCCCTGGAGATTTGTTTTATATTGTGT AGATTGTTACATTCGTCTCCATCTGTGTCAAATTTAACCAGCATTCAGCACTGTATGCAG AAACTTCAACATTTAGAGCAGAAAAGAATATCAGAATACATAGAACAGGCTCTGAGAAGT CAAAGAGATGAGATAATTCCTCATACTCAACAGCTAGCTAAAATTATTGAGTCCCTTAGT TTGACATCAAAGCAGGAATTGCTGAAAGAGAGTGTGGCTGTGGAAAGGGAGAGAATGAAT GCCCAAGTCAATAAAACAGCATATGAATTAGACCAAATCAATCAAATTGTGGAACTCGTC TCCCATATTCGTGATTGCATGGTTAGACTTGGGGGATTTGAAGCTATAAATGGTGTCCGA ATACCTTCATATTTCCGCTGCCCATTGTCTTTGGAACTCATGATGGATCCTGTGATTGTG GCATCTGGTCAGACCTATGAGAGGTCTTCCATCCAAAAATGGCTCGATCAAGGGTTGATG ATTTGCCCAAAAACCCGTCAAACTCTTGCACATGCAAATCTCATCCCCAATTACACTGTG AAAGCTTTGATAGAGAATTGGTGTGAGGAAAACAATATAACACTTTCTGGGACTTCCGAG CATACTAATATAACCCCAGTTCCATCCCCATTGGATCATGTATCTGCTCAAGATGTCATT GGAATGGATAGTTTCCGTTGTTCCATACACAGTAGCAATTGTACATCAAGATCCTCTTTG GAAGTTGGAAATGGAATTGAGAAATTAAAGGTTGATGTCTCCACCAGATTTGGTGGGGAA GAATCCAATGTATGCAAGAGTAGGGAACCTGAAAAGTTGGAGCGACAATCCCCTGAACAG TCATATATTCACAGCAGGACTGAATCAACCTCAAGTGCTGTTTCCAGTATTGATTCCTTA CCTACCGCGTCAACTGAATTGTCAAGGATATCCAATAAACAAGAAAATGGGACAGGGCTG TCTGGAGAAATCACATCGGAGTGTCACGCTTCTCCTTCAAATAGAGATTTGGAATTCTCT CCATGGTTTTCTGGAAAACAATTTCATAGCTCCAAAACAAAAGTGGAAATGGTCAGCAAT GGAAAATGTGGCCCCCCGAGAATTCTATCCCTTCCATTTTCCGACCCAAAATTTGATGAT TTGACCACCTCTTCCCATGTTGAGAAACTGGTTGAAGATCTAAAGAGTCAATCAAATGAA TTGCAAACTGTAGCTGCATCGGAATTGAGGCTTCTGGCAAAGCACAACATGGAGAACCGC ATTATTATAGGCCGTTGTGGGGCTATTGCACCATTAGTTTTACTTCTATACTCAGAAGTG AAGCAAACCCAAGAGAATGCCGTCACAGCTCTCTTGAATCTATCCATTAATGATGCAAAT AAGGTCATTATTGCAGAAGCTGGAGCTATAGAATCTCTTATCCATGTTCTGAAATCAGGA AATGCTGGAGCCAAAGAAAACTCTGCAGCAACTCTGTTTAGCCTGTCTGTTTTAGAAGAA TACAAAGCTAAGATTGGATGTTCTGGTGCAGTTAAAGCCTTGGTGGATCTTCTGGGCTCA GGGACTCTCAGAGGGAAGAAAGATGCTGCTACTGCATTGTTTAACCTATCAATATGCCAT GAAAATAAGCCTCGTATAATTCAAGCAGGAGCTGTGAAGTATCTTGTTCAATTGATGGAA CCTGCTACAGGAATGGTTGACAAGGCTGTTGCTCTTCTTGCAAACCTGTCAATAATTTCA GAGGGACGCTTTGCAATTGTACGGGAAGGGGGCATTCCCTTGTTGGTTGAGCTTGTCGAA ACAGGATCAGTGCGAGGAAAGGAAAATGCTGCCTCCATACTATTGCAACTATGCATTAAC AGTCCCAAATTTTGTACCCTGGTTCTGCAAGAAGGAGCCATCCCACCCCTTGTTGCCTTA TCTCAGTCTGGCACACCGAGAGCCAAGGAGAAGGCACAGCAGCTTCTCAGTCACTTCAGG AACCAGCGAGAAGGGGCTGCAGCGAAGGGAAAATCATGAAAAAGAAAATTTTTGTTGGTT TGCTTCTGCTTTTTTGATATTATACTCCCATGTAAGTTGTTATTGCTCCATATATATACT CTACCACCTCCTCTTCAAATATTCTTTATTTTTCAGTTATATCCATTTGCAAATGTAATC TCACACTTGTATCTAGCGCAAATGAAACGGGACTGTATACTTAGGCTATTTCCCAACCCC TTAGTTGTACCAGGAACATAACTCCAGCCTGATTGGTAACTGAAATCACCACGGTTTTGA TGCTCTGAA