Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g03410.t01
CDS Infomation

cds chromosome:12X:7:6276314:6278943:-1 gene:VIT_07s0005g03410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATAAAGAAACCGTTGTTGGGAGGAAATTACTAATTGCATCAAGTGTTACCATGGCT
AAGAGTCTTTGTTGCTTTTTGCTTTGCTTTCTTATTCTCTTCAATTACTGCTCGGCTCGG
CAGCAAAAGTCTAGGCAGCAAAATGAGTGCAGCATCTCTAGACTCACTGCTCAGAAACCT
TCCAACCGGATCCAGTCAGAGGCCGGTGTGACCGAGGTCTTTGATCATAACAATGAGCAA
TTCCAGTGCGCGGGTGTGGCTGTTGTTCGCTATACTATTGAACCCAACGGCTTGCTTTTG
CCTTCCTACGTCAATGCGCCTCAACTCTTGTACTTCGTCCAAGGTAGAGGCTTGCAGGGA
ATCCTGATCAGTGGTTGTCCTGAAACCTTCCAATCATTCCAGGAATCTCAGGAAGGGCAA
CAAGGAAGAGAACAGGAAGGGCAGCAAGGACAACAGGGACAACAAGGCCAGCAAGGACAA
CAAGGCCAGCAATTCCTTGGAGACCAACATCAGAAGATCCGAGAGGTCGAAGAGGGTGAT
GCTTTTGCAGTGCCCACCGGATTTGGGCATTATATCTATAACAATGGTAACAGACAGCTT
GTTGTAGTTTCTGTCCTCGACGTCAGCAATGAGGCCAACCAACTTGATTTCCAACCCAGA
AGATTCTATCTTGCCGGCAACCCACAAAATGAATTTCAGCAGCAACAGCAACAACAACAA
GAACAACAACAAGGAAGCGAGGGCCAGCAGCAACAGCAAGAAGGGGGCGGCAGTGAGGGC
AGAGGGCAAGAGAGTTCCGGCGACAACATCTTCAGTGGTTTCGATGCACAGCAGTTGGCT
GAGGCATTTAACGTGGATGTCCAGCTCATAAGGAAGCTTCAGGGCCAAAATGACAGGAGG
GGCAACATAGTGAGAGTGGAGGGAGGCCTACAGGCACTGTTACCACCAAGGGGACAACAG
GAGCGAGGAGAGCAACAGCAAGATCACCTCCATGCACGCGGAAATGGCTATGAAGAGACC
ATATGCAGCTTGAGGCTCAAACAAAACATCGGTGATCCATGGAGAGCAGATGTCTACACA
CCTAGAGGTGGACACAGGAGCAGCGTCACCGGCTATGATCTTCCAGTTCTCCAAAAGCTT
GTTAAATTAAGTGCTCATAAAGGACGTCTATATCAGGGCGCATTGGTGCTACCATACTAC
AACGTGAATGCCAATAGTGTAATCTACGCTATAAGAGGCAGTGCCAGGATTCAAGTAGTG
CAACAGCAGGGCCAGACAGTGGCCAATGAGGAAGTCCAGCAGGGTCAGGTGTTGGTTATT
CCACAGAACTTCGCTGCGTTGATAAAAGCAAGGGATTCAGGCTTTGAGTATGTGGCGATC
AAGACTGATGAAAATGCCATGATTAACACTTTAGCCGGCAATCTTTCGCTGATGCGGGCT
ATGCCAGTCCAAGTCATAGCCAGCGCCTACCAGGCGTCCAATAACGAGGCTAAGCAGCTG
AAGCATAACAGGCAGGAGAGCACTATAGGGGCTCCGGGAAGTTCTAGGTCTGAGTAG

Peptide Sequence

PEP ID

VIT_07s0005g03410.t01
PEP Infomation

pep chromosome:12X:7:6276314:6278943:-1 gene:VIT_07s0005g03410 transcript:VIT_07s0005g03410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDKETVVGRKLLIASSVTMAKSLCCFLLCFLILFNYCSARQQKSRQQNECSISRLTAQKP
SNRIQSEAGVTEVFDHNNEQFQCAGVAVVRYTIEPNGLLLPSYVNAPQLLYFVQGRGLQG
ILISGCPETFQSFQESQEGQQGREQEGQQGQQGQQGQQGQQGQQFLGDQHQKIREVEEGD
AFAVPTGFGHYIYNNGNRQLVVVSVLDVSNEANQLDFQPRRFYLAGNPQNEFQQQQQQQQ
EQQQGSEGQQQQQEGGGSEGRGQESSGDNIFSGFDAQQLAEAFNVDVQLIRKLQGQNDRR
GNIVRVEGGLQALLPPRGQQERGEQQQDHLHARGNGYEETICSLRLKQNIGDPWRADVYT
PRGGHRSSVTGYDLPVLQKLVKLSAHKGRLYQGALVLPYYNVNANSVIYAIRGSARIQVV
QQQGQTVANEEVQQGQVLVIPQNFAALIKARDSGFEYVAIKTDENAMINTLAGNLSLMRA
MPVQVIASAYQASNNEAKQLKHNRQESTIGAPGSSRSE

Transcript Sequence

Transcript ID

VIT_07s0005g03410.t01
Transcript Infomation

cdna chromosome:12X:7:6276314:6278943:-1 gene:VIT_07s0005g03410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATAAAGAAACCGTTGTTGGGAGGAAATTACTAATTGCATCAAGTGTTACCATGGCT
AAGAGTCTTTGTTGCTTTTTGCTTTGCTTTCTTATTCTCTTCAATTACTGCTCGGCTCGG
CAGCAAAAGTCTAGGCAGCAAAATGAGTGCAGCATCTCTAGACTCACTGCTCAGAAACCT
TCCAACCGGATCCAGTCAGAGGCCGGTGTGACCGAGGTCTTTGATCATAACAATGAGCAA
TTCCAGTGCGCGGGTGTGGCTGTTGTTCGCTATACTATTGAACCCAACGGCTTGCTTTTG
CCTTCCTACGTCAATGCGCCTCAACTCTTGTACTTCGTCCAAGGTAGAGGCTTGCAGGGA
ATCCTGATCAGTGGTTGTCCTGAAACCTTCCAATCATTCCAGGAATCTCAGGAAGGGCAA
CAAGGAAGAGAACAGGAAGGGCAGCAAGGACAACAGGGACAACAAGGCCAGCAAGGACAA
CAAGGCCAGCAATTCCTTGGAGACCAACATCAGAAGATCCGAGAGGTCGAAGAGGGTGAT
GCTTTTGCAGTGCCCACCGGATTTGGGCATTATATCTATAACAATGGTAACAGACAGCTT
GTTGTAGTTTCTGTCCTCGACGTCAGCAATGAGGCCAACCAACTTGATTTCCAACCCAGA
AGATTCTATCTTGCCGGCAACCCACAAAATGAATTTCAGCAGCAACAGCAACAACAACAA
GAACAACAACAAGGAAGCGAGGGCCAGCAGCAACAGCAAGAAGGGGGCGGCAGTGAGGGC
AGAGGGCAAGAGAGTTCCGGCGACAACATCTTCAGTGGTTTCGATGCACAGCAGTTGGCT
GAGGCATTTAACGTGGATGTCCAGCTCATAAGGAAGCTTCAGGGCCAAAATGACAGGAGG
GGCAACATAGTGAGAGTGGAGGGAGGCCTACAGGCACTGTTACCACCAAGGGGACAACAG
GAGCGAGGAGAGCAACAGCAAGATCACCTCCATGCACGCGGAAATGGCTATGAAGAGACC
ATATGCAGCTTGAGGCTCAAACAAAACATCGGTGATCCATGGAGAGCAGATGTCTACACA
CCTAGAGGTGGACACAGGAGCAGCGTCACCGGCTATGATCTTCCAGTTCTCCAAAAGCTT
GTTAAATTAAGTGCTCATAAAGGACGTCTATATCAGGGCGCATTGGTGCTACCATACTAC
AACGTGAATGCCAATAGTGTAATCTACGCTATAAGAGGCAGTGCCAGGATTCAAGTAGTG
CAACAGCAGGGCCAGACAGTGGCCAATGAGGAAGTCCAGCAGGGTCAGGTGTTGGTTATT
CCACAGAACTTCGCTGCGTTGATAAAAGCAAGGGATTCAGGCTTTGAGTATGTGGCGATC
AAGACTGATGAAAATGCCATGATTAACACTTTAGCCGGCAATCTTTCGCTGATGCGGGCT
ATGCCAGTCCAAGTCATAGCCAGCGCCTACCAGGCGTCCAATAACGAGGCTAAGCAGCTG
AAGCATAACAGGCAGGAGAGCACTATAGGGGCTCCGGGAAGTTCTAGGTCTGAGTAGAGG
GCCTCTGCTTAATGCATCAGGTTTGTTTATCAGGTTGTTGTATAGGTTTGGAAAATAATA
AGAGGCCATATTACTTGGCTTTTTTGTACCCCATGATGTACAATGAGAGTTGAGTTTTTG
CTCTTTAATAATAATAATAATAACACCAATAATGCTTATGCAGT