Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g03380.t01
CDS Infomation

cds chromosome:12X:7:6254526:6266907:-1 gene:VIT_07s0005g03380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTAGCAGAAAGCTGGTTCGAGATCTATACCTCTCCAAACAGCCCCTTCTTCTCCAT
CTACTCTCTTCTCAACAGGCTTCAAGTGCAAGGCTACGATTGATATCTCCAAATGGATGT
TCTGGTTATCGTGGATTCAGTGTCTTCAATGAGTTCTCCAATAAAATAAAAGGCGAAGTT
AACAGAAATTCGGAATTTCAACAGACAGTCAAGGAGCTGAAGGAGAAAGCAGAGGAGCTC
AAAGGGGTGAAAGAAGAGCTGAAAGTTAGAACGAAGCAGACAACAGAGCAGCTGTACAAG
CATGTGGATGGCGTGTGGACGGAGGCTGAAGCTACAGCAAAGAAGGTTTCTGCCAATGTG
AAGGAGAAGATTTCAGCGGCCACTGAGGATGTCAAAGAGACTTTTGGGAAGGGGAAGCAA
GAATTTTCAGAATCTGCTGGTACTTCAGCTAAATCTGAAGCTGATGTAAACAAGGGAAGT
AGTTCATCTGGTGAAGAAAAACACCATAAGTCTGGGCCTAGTGATACTGCAGAAACATTA
TTTGGAAAATTTAAGTCAAGTGTCTCCACTGTATCTCCTAAAGTTTCTCTAGCCTTTGAG
AAATTGAAGGAAGCAAAAGTTCTTGATTTAGCCAAGAAGGGGTACGGCATTGTAAAGGAT
GAGTTGAGCAGTAATCCAAGTAAGAGAAAGCAAATGCAACGTGCAGCTTCTTCTGCATCA
CCAGGTGAAAGAAGTACAAAAACAGACATCGTTATTGTACCCTCAAAGCAATCTCGATGG
AGTAAAAAATGGGAGGCACTCAAAGATAAGGCAAGTCATCCTGTATTCAAGCGTATCAGT
GGATTAAGTGAACCTGTTGTGACCAAGGGTCAGGAGTTGGCAGAAGATGTGCGTGAAAGA
TGGGAGACCAGTGATAACCCTGTTGTGCACAAAATTCAGGATCTCAATGAAAGTGTCTTT
GGAGAAACAGCTGCTGCAATGTCATTCAAAGAAATACGTCGTCGAGATCCATCTTTTTCC
TTACCAGACTTCGTGTCAGAGGTTCAGGAGGTGATCCGGCCAGTCCTTAATGCTTACATT
AAGGGAGATGCAGAAACTTTGAAGAAGTATTGTAGCCCAGAAGTTATTGAGCGATGTAAA
GCTGAACACGGTGCCTATCAAACCATGGGTATCATTTTTGATAACAAGATTCTACATATA
TCTGATGTGGAAGTAAGAGAAACCAAAATGATGGGAACCAGTCCCATAATTATTGTCGCG
TTCCAAACACAGCAGGTGTACTGTGTACGCAGTGCAGATGGCTCCATAAAAGAAGGGGGC
AAGGATACAATCCACACTGTGTACTATGCATGGGCCATGCAACAAGTGGATGCAGAGGAA
CTTGGGGAAGGGGCTATCTACCCAATATGGAGGCTAAGAGAAATGCAACAGCTTGGTGTC
CAAGCCCTCATCTAG

Peptide Sequence

PEP ID

VIT_07s0005g03380.t01
PEP Infomation

pep chromosome:12X:7:6254526:6266907:-1 gene:VIT_07s0005g03380 transcript:VIT_07s0005g03380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSRKLVRDLYLSKQPLLLHLLSSQQASSARLRLISPNGCSGYRGFSVFNEFSNKIKGEV
NRNSEFQQTVKELKEKAEELKGVKEELKVRTKQTTEQLYKHVDGVWTEAEATAKKVSANV
KEKISAATEDVKETFGKGKQEFSESAGTSAKSEADVNKGSSSSGEEKHHKSGPSDTAETL
FGKFKSSVSTVSPKVSLAFEKLKEAKVLDLAKKGYGIVKDELSSNPSKRKQMQRAASSAS
PGERSTKTDIVIVPSKQSRWSKKWEALKDKASHPVFKRISGLSEPVVTKGQELAEDVRER
WETSDNPVVHKIQDLNESVFGETAAAMSFKEIRRRDPSFSLPDFVSEVQEVIRPVLNAYI
KGDAETLKKYCSPEVIERCKAEHGAYQTMGIIFDNKILHISDVEVRETKMMGTSPIIIVA
FQTQQVYCVRSADGSIKEGGKDTIHTVYYAWAMQQVDAEELGEGAIYPIWRLREMQQLGV
QALI

Transcript Sequence

Transcript ID

VIT_07s0005g03380.t01
Transcript Infomation

cdna chromosome:12X:7:6254526:6266907:-1 gene:VIT_07s0005g03380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTTATCCAGGTTCCCAAACATACCCTAACACGCCCTTCAGGTACGTTAGGTTTTCTCT
CACAAGTCACAACGCTGCTCCCTCTTCCTTGAGAAAAATCTGAATTTTCTCAAGAAAATC
ATCCTTTGATGGGTAGCAGAAAGCTGGTTCGAGATCTATACCTCTCCAAACAGCCCCTTC
TTCTCCATCTACTCTCTTCTCAACAGGCTTCAAGTGCAAGGCTACGATTGATATCTCCAA
ATGGATGTTCTGGTTATCGTGGATTCAGTGTCTTCAATGAGTTCTCCAATAAAATAAAAG
GCGAAGTTAACAGAAATTCGGAATTTCAACAGACAGTCAAGGAGCTGAAGGAGAAAGCAG
AGGAGCTCAAAGGGGTGAAAGAAGAGCTGAAAGTTAGAACGAAGCAGACAACAGAGCAGC
TGTACAAGCATGTGGATGGCGTGTGGACGGAGGCTGAAGCTACAGCAAAGAAGGTTTCTG
CCAATGTGAAGGAGAAGATTTCAGCGGCCACTGAGGATGTCAAAGAGACTTTTGGGAAGG
GGAAGCAAGAATTTTCAGAATCTGCTGGTACTTCAGCTAAATCTGAAGCTGATGTAAACA
AGGGAAGTAGTTCATCTGGTGAAGAAAAACACCATAAGTCTGGGCCTAGTGATACTGCAG
AAACATTATTTGGAAAATTTAAGTCAAGTGTCTCCACTGTATCTCCTAAAGTTTCTCTAG
CCTTTGAGAAATTGAAGGAAGCAAAAGTTCTTGATTTAGCCAAGAAGGGGTACGGCATTG
TAAAGGATGAGTTGAGCAGTAATCCAAGTAAGAGAAAGCAAATGCAACGTGCAGCTTCTT
CTGCATCACCAGGTGAAAGAAGTACAAAAACAGACATCGTTATTGTACCCTCAAAGCAAT
CTCGATGGAGTAAAAAATGGGAGGCACTCAAAGATAAGGCAAGTCATCCTGTATTCAAGC
GTATCAGTGGATTAAGTGAACCTGTTGTGACCAAGGGTCAGGAGTTGGCAGAAGATGTGC
GTGAAAGATGGGAGACCAGTGATAACCCTGTTGTGCACAAAATTCAGGATCTCAATGAAA
GTGTCTTTGGAGAAACAGCTGCTGCAATGTCATTCAAAGAAATACGTCGTCGAGATCCAT
CTTTTTCCTTACCAGACTTCGTGTCAGAGGTTCAGGAGGTGATCCGGCCAGTCCTTAATG
CTTACATTAAGGGAGATGCAGAAACTTTGAAGAAGTATTGTAGCCCAGAAGTTATTGAGC
GATGTAAAGCTGAACACGGTGCCTATCAAACCATGGGTATCATTTTTGATAACAAGATTC
TACATATATCTGATGTGGAAGTAAGAGAAACCAAAATGATGGGAACCAGTCCCATAATTA
TTGTCGCGTTCCAAACACAGCAGGTGTACTGTGTACGCAGTGCAGATGGCTCCATAAAAG
AAGGGGGCAAGGATACAATCCACACTGTGTACTATGCATGGGCCATGCAACAAGTGGATG
CAGAGGAACTTGGGGAAGGGGCTATCTACCCAATATGGAGGCTAAGAGAAATGCAACAGC
TTGGTGTCCAAGCCCTCATCTAGCTCTTTTATATTCCCATCTTGCAAATGGATGTTGTAC
CGATTCATTTTCTCTGGGTTTTGTTATTTCACTGCCAGGGGAAATTCTAATGAGCTATTT
CCTCATTATTTTGTTAAAAATAAAGAACATGAGTCTTGCAAATTCATTAATTCAAGAGAA
AGGTATATTTACTTGTTGCCTG