Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_07s0005g02540.t01
CDS Infomation	cds chromosome:12X:7:4880509:4884902:1 gene:VIT_07s0005g02540 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protoporphyrinogen oxidase [Source:UniProtKB/TrEMBL;Acc:D7U2T4]
Sequence	ATGCCCACCCTCACCCTCGCTGACCCTCCCACTCTTCGCCTTCTTTCTCCCGTAAATCTC CGCCGCTCCACCTCCATCAGCTCTCCATTTTTCTGTAGACCGTCTAGGAACAATTGCACT GGTCCATGGAGAGTCCGATGTGCCGTCGCCGGGGAGTCTACAATTTCTTCCTCCAAGGTC GGCGACGGAAATAATTACTCGCCGGTGGACTGCGTCATCGTCGGGGCGGGAATCAGCGGC CTCTGCATCGCTCAAGCTCTCGCCACCAAGCACGGCGATGTGGGCAGCAATGTGATTGTG ACAGAGGCGAGAGATCGCGTTGGGGGCAATATAACCACCATGGAGGGGGACGGCTATCTC TGGGAGGAAGGCCCCAACAGCTTCCAGCCCTCCGATTCCATGCTCACCATGGCCGTGGAT AGTGGTTTGAAGGATGATCTTGTTTTGGGGGATCCTAATGCACCTAGATTTGTATTGTGG AATGGTAAATTGAGGCCGGTTCCCTCCAAGCCAACCGACCTGCCCTTCTTTGACTTGATG AGTTTTCCTGGAAAACTCAGGGCTGGGTTTGGTGCCCTTGGCATTCGACCTCCTCCACCA GATCATGAGGAATCTGTTGAAGAGTTTGTGCGTCGTAATCTTGGTGATGAGGTTTTTGAA CGCCTGATAGAGCCATTTTGTTCAGGTGTTTATGCAGGAGATCCTTCAAAACTGAGCATG AAAGCAGCATTTGGAAAAGTTTGGAAGCTTGAGCAGAAGGGTGGTAGTATAATTGGTGGC ACCTTCAAAGCAATCCAGGAGAAAAATAATACTCCCAAGCCTCTGCGAGACCCGCGTTTG CCAAAGCCAAAGGGGCAAACGGTTGGATCTTTTAAGAAGGGACTTATTATGTTGCCAGAA GCAATTTCTAAAAGGTTGGGTGGCAAAGTAAAATTATCTTGGAAACTTTCAAGCATCATT AGATTGGATGATGGAGGGTATAGTCTGACTTATGAAACACCAGAAGGATTAGTTTCTCTG CAGAGTAGAAGTGTTGTGATGACTGTTCCATCCCGCGTTGCAAGTAGTCTGTTGCATCCT CTTTCTGCTGTTGCTGCAGATGCACTATCAAAGTTTTACTACCCCCCAGTTGCGGCAGTG TCCATTTCATATCCAAAGGAAGCAATTCGGACAGAATGCTTGATAGAAGGTGAACTTAAG GGATTTGGCCAGTTACATCCACGTAGCCAAGGGGTGGAAACTTTAGGAACCATATACAGC TCATCACTTTTTCCTAACCGAGCACCGCCTGGAAGGATTTTGCTCTTGAACTACATTGGA GGGGCTACCAATCCTGGAATTTTGTCCAAGACAGAGAGTGAACTTGTGGAAGCAGTAGAC AGAGATTTGAGGAAGATGCTCATTAATCCTAATGCAAAGGATCCACTTGTTTTGGGTGTG AGAGTATGGCCGCAGGCCATTCCACAGTTTTTGATTGGTCATCTTGATCTCCTTGATGCT GCCAAATCCGCTCTCAGGGATGGTGGGTTCCAGGGCATGTTCCTCGGGGGCAACTATGTA TCTGGTGTAGCCTTGGGACGATGCGTGGAGGGTGCATACGAAGTTGCAGCTGAGGTAGCT GATTTCCTATCGCAGTATGTGTACAAATAG

Peptide Sequence

PEP ID	VIT_07s0005g02540.t01
PEP Infomation	pep chromosome:12X:7:4880509:4884902:1 gene:VIT_07s0005g02540 transcript:VIT_07s0005g02540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protoporphyrinogen oxidase [Source:UniProtKB/TrEMBL;Acc:D7U2T4]
Sequence	MPTLTLADPPTLRLLSPVNLRRSTSISSPFFCRPSRNNCTGPWRVRCAVAGESTISSSKV GDGNNYSPVDCVIVGAGISGLCIAQALATKHGDVGSNVIVTEARDRVGGNITTMEGDGYL WEEGPNSFQPSDSMLTMAVDSGLKDDLVLGDPNAPRFVLWNGKLRPVPSKPTDLPFFDLM SFPGKLRAGFGALGIRPPPPDHEESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSM KAAFGKVWKLEQKGGSIIGGTFKAIQEKNNTPKPLRDPRLPKPKGQTVGSFKKGLIMLPE AISKRLGGKVKLSWKLSSIIRLDDGGYSLTYETPEGLVSLQSRSVVMTVPSRVASSLLHP LSAVAADALSKFYYPPVAAVSISYPKEAIRTECLIEGELKGFGQLHPRSQGVETLGTIYS SSLFPNRAPPGRILLLNYIGGATNPGILSKTESELVEAVDRDLRKMLINPNAKDPLVLGV RVWPQAIPQFLIGHLDLLDAAKSALRDGGFQGMFLGGNYVSGVALGRCVEGAYEVAAEVA DFLSQYVYK

Transcript Sequence

Transcript ID	VIT_07s0005g02540.t01
Transcript Infomation	cdna chromosome:12X:7:4880509:4884902:1 gene:VIT_07s0005g02540 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protoporphyrinogen oxidase [Source:UniProtKB/TrEMBL;Acc:D7U2T4]
Sequence	ATGCCCACCCTCACCCTCGCTGACCCTCCCACTCTTCGCCTTCTTTCTCCCGTAAATCTC CGCCGCTCCACCTCCATCAGCTCTCCATTTTTCTGTAGACCGTCTAGGAACAATTGCACT GGTCCATGGAGAGTCCGATGTGCCGTCGCCGGGGAGTCTACAATTTCTTCCTCCAAGGTC GGCGACGGAAATAATTACTCGCCGGTGGACTGCGTCATCGTCGGGGCGGGAATCAGCGGC CTCTGCATCGCTCAAGCTCTCGCCACCAAGCACGGCGATGTGGGCAGCAATGTGATTGTG ACAGAGGCGAGAGATCGCGTTGGGGGCAATATAACCACCATGGAGGGGGACGGCTATCTC TGGGAGGAAGGCCCCAACAGCTTCCAGCCCTCCGATTCCATGCTCACCATGGCCGTGGAT AGTGGTTTGAAGGATGATCTTGTTTTGGGGGATCCTAATGCACCTAGATTTGTATTGTGG AATGGTAAATTGAGGCCGGTTCCCTCCAAGCCAACCGACCTGCCCTTCTTTGACTTGATG AGTTTTCCTGGAAAACTCAGGGCTGGGTTTGGTGCCCTTGGCATTCGACCTCCTCCACCA GATCATGAGGAATCTGTTGAAGAGTTTGTGCGTCGTAATCTTGGTGATGAGGTTTTTGAA CGCCTGATAGAGCCATTTTGTTCAGGTGTTTATGCAGGAGATCCTTCAAAACTGAGCATG AAAGCAGCATTTGGAAAAGTTTGGAAGCTTGAGCAGAAGGGTGGTAGTATAATTGGTGGC ACCTTCAAAGCAATCCAGGAGAAAAATAATACTCCCAAGCCTCTGCGAGACCCGCGTTTG CCAAAGCCAAAGGGGCAAACGGTTGGATCTTTTAAGAAGGGACTTATTATGTTGCCAGAA GCAATTTCTAAAAGGTTGGGTGGCAAAGTAAAATTATCTTGGAAACTTTCAAGCATCATT AGATTGGATGATGGAGGGTATAGTCTGACTTATGAAACACCAGAAGGATTAGTTTCTCTG CAGAGTAGAAGTGTTGTGATGACTGTTCCATCCCGCGTTGCAAGTAGTCTGTTGCATCCT CTTTCTGCTGTTGCTGCAGATGCACTATCAAAGTTTTACTACCCCCCAGTTGCGGCAGTG TCCATTTCATATCCAAAGGAAGCAATTCGGACAGAATGCTTGATAGAAGGTGAACTTAAG GGATTTGGCCAGTTACATCCACGTAGCCAAGGGGTGGAAACTTTAGGAACCATATACAGC TCATCACTTTTTCCTAACCGAGCACCGCCTGGAAGGATTTTGCTCTTGAACTACATTGGA GGGGCTACCAATCCTGGAATTTTGTCCAAGACAGAGAGTGAACTTGTGGAAGCAGTAGAC AGAGATTTGAGGAAGATGCTCATTAATCCTAATGCAAAGGATCCACTTGTTTTGGGTGTG AGAGTATGGCCGCAGGCCATTCCACAGTTTTTGATTGGTCATCTTGATCTCCTTGATGCT GCCAAATCCGCTCTCAGGGATGGTGGGTTCCAGGGCATGTTCCTCGGGGGCAACTATGTA TCTGGTGTAGCCTTGGGACGATGCGTGGAGGGTGCATACGAAGTTGCAGCTGAGGTAGCT GATTTCCTATCGCAGTATGTGTACAAATAGTCGCATTTTGGATTAAACTCTGGGGATAAT AAGAGCTGCTGCATCTGGTAGAATGCATTGATAAGGAGTTTTTCCTGGAGGGTCTCAAAG TTTTGAGTACTTTATTTTGTTCCTAAGAGTTCCTTGTTTTGTACGTCTTCATTATCACTT ATTTCATTAATGATTCCTGATTACTGAGAAAATCAAAGTTTT