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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g02220.t01
CDS Infomation

cds chromosome:12X:7:4605071:4605897:-1 gene:VIT_07s0005g02220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F6HZE1]
Sequence

ATGGCCACCATGGCTCTCTCATCTCCATTTGTAGGCAAGGTGGTTCCGTTGAACCCAGGC
ACAGAGTTCTCATCGAAGGTTCGCGGCGATGGTAGAATCTCAATGAGGAAGTCATTTGCG
AAGCCATCTGGAAGCCCCTGGTATGGCCCTGACCGTGTTAAGTACCTGGGACCATTTTCT
GGTGAGCCTCCATCCTACCTTACCGGTGAGTTCCCTGGTGACTATGGGTGGGACACTGCA
GGACTATCAGCAGATCCCGAAACCTTTGCCAAGAACCGAGAGCTCGAGGTGATTCACTGC
AGGTGGGCAATGCTTGGGGCTTTGGGATGTGTCTTCCCTGAGCTTCTCTCCAGAAATGGA
GTCAAGTTTGGTGAGGCAGTGTGGTTCAAGGCTGGTGCTCAGATTTTCAGCGAGGGTGGT
CTCGACTACCTTGGGAACCCGGGTCTAGTTCATGCTCAGAGCATCTTAGCCATATGGGCT
TGCCAGGTTATCCTCATGGGTGCTGTTGAGGGGTACCGCATTGGAGGAGGACCTCTTGGT
GAGGTGATTGACCCTCTGTACCCAGGTGGGAGCTTTGACCCATTGGGACTTGCTGATGAT
CCTGAGGCATTTGCTGAGCTTAAGGTGAAGGAAATCAAGAACGGGCGTCTTGCCATGTTC
TCCATGTTTGGTTTCTTTGTGCAGGCTATTGTAACCGGCAAAGGACCTTTGGAGAACCTT
GCTGACCATCTAGCCGACCCAGTGAACAACAACGCCTGGGCCTATGCCACCAACTTTGTG
CCTGGGAAGTGA

Peptide Sequence

PEP ID

VIT_07s0005g02220.t01
PEP Infomation

pep chromosome:12X:7:4605071:4605897:-1 gene:VIT_07s0005g02220 transcript:VIT_07s0005g02220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F6HZE1]
Sequence

MATMALSSPFVGKVVPLNPGTEFSSKVRGDGRISMRKSFAKPSGSPWYGPDRVKYLGPFS
GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNG
VKFGEAVWFKAGAQIFSEGGLDYLGNPGLVHAQSILAIWACQVILMGAVEGYRIGGGPLG
EVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL
ADHLADPVNNNAWAYATNFVPGK

Transcript Sequence

Transcript ID

VIT_07s0005g02220.t01
Transcript Infomation

cdna chromosome:12X:7:4605071:4605897:-1 gene:VIT_07s0005g02220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F6HZE1]
Sequence

GGATCATCAGCACCCAGCACCAGGCATATCACATGGCCACCATGGCTCTCTCATCTCCAT
TTGTAGGCAAGGTGGTTCCGTTGAACCCAGGCACAGAGTTCTCATCGAAGGTTCGCGGCG
ATGGTAGAATCTCAATGAGGAAGTCATTTGCGAAGCCATCTGGAAGCCCCTGGTATGGCC
CTGACCGTGTTAAGTACCTGGGACCATTTTCTGGTGAGCCTCCATCCTACCTTACCGGTG
AGTTCCCTGGTGACTATGGGTGGGACACTGCAGGACTATCAGCAGATCCCGAAACCTTTG
CCAAGAACCGAGAGCTCGAGGTGATTCACTGCAGGTGGGCAATGCTTGGGGCTTTGGGAT
GTGTCTTCCCTGAGCTTCTCTCCAGAAATGGAGTCAAGTTTGGTGAGGCAGTGTGGTTCA
AGGCTGGTGCTCAGATTTTCAGCGAGGGTGGTCTCGACTACCTTGGGAACCCGGGTCTAG
TTCATGCTCAGAGCATCTTAGCCATATGGGCTTGCCAGGTTATCCTCATGGGTGCTGTTG
AGGGGTACCGCATTGGAGGAGGACCTCTTGGTGAGGTGATTGACCCTCTGTACCCAGGTG
GGAGCTTTGACCCATTGGGACTTGCTGATGATCCTGAGGCATTTGCTGAGCTTAAGGTGA
AGGAAATCAAGAACGGGCGTCTTGCCATGTTCTCCATGTTTGGTTTCTTTGTGCAGGCTA
TTGTAACCGGCAAAGGACCTTTGGAGAACCTTGCTGACCATCTAGCCGACCCAGTGAACA
ACAACGCCTGGGCCTATGCCACCAACTTTGTGCCTGGGAAGTGAGAT