Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g02060.t01
CDS Infomation

cds chromosome:12X:7:4481998:4485745:1 gene:VIT_07s0005g02060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGAGACTTTTGTACCATTTCGTGGAATAAAGAATGATCTTCGAGGAAGATTGATG
TGCTACAAGCAAGATTGGGCTGGTGGATTCAGAGCAGGCTTCCGGATTTTGGCCCCTACC
ACGTACATATTCTTTGCTTCTGCTATCCCGGTCATTTCATTTGGTGAACAACTGGAGAGA
AATACTGAAGGAGTTCTGACTGCAGTTCAGACCTTGGCATCCACAGCAATTTGTGGGATT
ATACACTCCATCATTGGAGGACAACCCCTGCTGATCTTAGGAGTTGCAGAGCCCACTGTC
ATCATGTACACATTCATGTTCAATTTTGCCAAGGAGAGACCAGATTTGGGCCGGAAGCTG
TTTCTAGCATGGACTGGATGGGTATGTGTGTGGACTGCATTCTTGCTGTTCTTACTGGCT
ATCTTAGGAGCTTGCTCCATTATCAATAGGTTTACCCGTGTGGCAGGAGAATTGTTTGGT
CTGCTCATCGCTATGCTCTTCATGCAGCAAGCTATTAAGGGAATTGTGGATGAGTTTCGC
ATACCAAAACAAGAAAATGCCAAGTTAACAGAGTTCATACCTTCATGGAGATTCGCAAAT
GGGATGTTTGCTTTGGTTCTCTCATTTGGCCTTCTGCTCACAGCATTAAGAAGCCGAAAA
GCAAGGTCATGGAGATATGGGACTGGTTGGCTTCGGAGCCTTATAGCAGACTATGGTGTG
CCCCTTATGGTTCTAATCTGGACAGCGGTTTCCTACATACCTGCTGGAAGCGTTCCAAAA
GGAATTCCACGACGCCTTGTCAGCCCAAATCCATGGTCACCTGGTGCATACGAGAATTGG
ACTGTCATTAAGGACATGCTTGATGTGCCAGTTCTCTATATAGTCGGAGCTTTTATTCCA
GCGACGATGATCGCAGTGCTTTACTATTTTGACCATAGTGTAGCATCTCAACTTGCTCAG
CAGAAAGAATTCAATTTGAGAAAGCCACCATCTTTCCATTATGACTTGCTTCTTTTAGGG
TTCTTGACCATTATGTGTGGTCTTATTGGAATCCCTCCATCAAATGGTGTGATCCCACAA
TCTCCAATGCATACAAAAAGTCTGGCTACTCTTAAACATCAGTTGCTTCGTAACCGTCTT
GTTGCAACAGCACGCATAAGTATGAGAAAGAACTCAAGCTTAAGTCAATTGTATGGAAAT
ATGCAAGAAGCTTATCAGCAAATGCAGACCCCTTTGATCTACCAGGAGCCCTCAGCTCGA
GGACTAAAGGAGTTAAAAGAATCAACAATTCAATTGGCTTCAAGCATGGGGGCAATTGAT
GCCCCAGTTGATGAGACGGTATTTGATGTTGAGAAGGAGATTGATGACCTACTGCCTGTG
GAGGTGAAAGAACAGCGCCTGAGCAACTTGCTTCAAGCCGCAGCAGTTGGTGGATGTGTT
GCAGCCATGCCTATCCTTAAAATGATCCCAACCTCAGTACTTTGGGGCTACTTTGCCTTC
ATGGCCATTGAAAGTTTACCAGGTAACCAGTTTTGGGAAAGGATTTTATTGCTCTTCACC
GCACCAAGCAGAAGATACAAAGTTCTAGAGGAGTATCATGCCACCTTCGTGGAAACTGTG
CCTTTCAAGAGTATTGCGACATTTACAATTTTCCAAACAGCATACTTGCTTATCTGTTTT
GGGATCACATGGGTTCCAATTGCAGGGTTGTTGTTCCCTTTGATGATCATGCTTTTGGTT
CCTGTGAGACAATACTTTCTGCCCAAGTTTTTCAAAGGGGCACACCTTCAAGATTTAGAT
GCAGCAGAGTATGAAGAGGCACCAGCTTTACCTTTCAATCTTGCAATGGAGGGAGAGATG
GGGGCTGGAGCTTCTTTGGCAGAGGGTGGAGAGATTTTAGATGAAATAATTACTAGAAGC
CGTGGTGAAATTAGGCATATGTGCAGTCCTAAGATCACAAGCTCCACTGCAACACCAACA
AAAGATCCCAGAAACTTTCAGAGTCCTCGTCTATCAGAAAAAGCATACAGCCCTCGAGTA
AGCGAACTAAGAGGGGAGCATAGTCCTCAATCAAGCGGGAGAGGGAAATACAGTCCAAAG
ACAGGAGAAGTGAAGCCGTCTAACTTGGGAAAAAGTCCACATTCCTCAAACTAA

Peptide Sequence

PEP ID

VIT_07s0005g02060.t01
PEP Infomation

pep chromosome:12X:7:4481998:4485745:1 gene:VIT_07s0005g02060 transcript:VIT_07s0005g02060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEETFVPFRGIKNDLRGRLMCYKQDWAGGFRAGFRILAPTTYIFFASAIPVISFGEQLER
NTEGVLTAVQTLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPDLGRKL
FLAWTGWVCVWTAFLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGIVDEFR
IPKQENAKLTEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGTGWLRSLIADYGV
PLMVLIWTAVSYIPAGSVPKGIPRRLVSPNPWSPGAYENWTVIKDMLDVPVLYIVGAFIP
ATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFLTIMCGLIGIPPSNGVIPQ
SPMHTKSLATLKHQLLRNRLVATARISMRKNSSLSQLYGNMQEAYQQMQTPLIYQEPSAR
GLKELKESTIQLASSMGAIDAPVDETVFDVEKEIDDLLPVEVKEQRLSNLLQAAAVGGCV
AAMPILKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEEYHATFVETV
PFKSIATFTIFQTAYLLICFGITWVPIAGLLFPLMIMLLVPVRQYFLPKFFKGAHLQDLD
AAEYEEAPALPFNLAMEGEMGAGASLAEGGEILDEIITRSRGEIRHMCSPKITSSTATPT
KDPRNFQSPRLSEKAYSPRVSELRGEHSPQSSGRGKYSPKTGEVKPSNLGKSPHSSN

Transcript Sequence

Transcript ID

VIT_07s0005g02060.t01
Transcript Infomation

cdna chromosome:12X:7:4481998:4485745:1 gene:VIT_07s0005g02060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGCCATGGAGGAGACTTTTGTACCATTTCGTGGAATAAAGAATGATCTTCGAGGAAGA
TTGATGTGCTACAAGCAAGATTGGGCTGGTGGATTCAGAGCAGGCTTCCGGATTTTGGCC
CCTACCACGTACATATTCTTTGCTTCTGCTATCCCGGTCATTTCATTTGGTGAACAACTG
GAGAGAAATACTGAAGGAGTTCTGACTGCAGTTCAGACCTTGGCATCCACAGCAATTTGT
GGGATTATACACTCCATCATTGGAGGACAACCCCTGCTGATCTTAGGAGTTGCAGAGCCC
ACTGTCATCATGTACACATTCATGTTCAATTTTGCCAAGGAGAGACCAGATTTGGGCCGG
AAGCTGTTTCTAGCATGGACTGGATGGGTATGTGTGTGGACTGCATTCTTGCTGTTCTTA
CTGGCTATCTTAGGAGCTTGCTCCATTATCAATAGGTTTACCCGTGTGGCAGGAGAATTG
TTTGGTCTGCTCATCGCTATGCTCTTCATGCAGCAAGCTATTAAGGGAATTGTGGATGAG
TTTCGCATACCAAAACAAGAAAATGCCAAGTTAACAGAGTTCATACCTTCATGGAGATTC
GCAAATGGGATGTTTGCTTTGGTTCTCTCATTTGGCCTTCTGCTCACAGCATTAAGAAGC
CGAAAAGCAAGGTCATGGAGATATGGGACTGGTTGGCTTCGGAGCCTTATAGCAGACTAT
GGTGTGCCCCTTATGGTTCTAATCTGGACAGCGGTTTCCTACATACCTGCTGGAAGCGTT
CCAAAAGGAATTCCACGACGCCTTGTCAGCCCAAATCCATGGTCACCTGGTGCATACGAG
AATTGGACTGTCATTAAGGACATGCTTGATGTGCCAGTTCTCTATATAGTCGGAGCTTTT
ATTCCAGCGACGATGATCGCAGTGCTTTACTATTTTGACCATAGTGTAGCATCTCAACTT
GCTCAGCAGAAAGAATTCAATTTGAGAAAGCCACCATCTTTCCATTATGACTTGCTTCTT
TTAGGGTTCTTGACCATTATGTGTGGTCTTATTGGAATCCCTCCATCAAATGGTGTGATC
CCACAATCTCCAATGCATACAAAAAGTCTGGCTACTCTTAAACATCAGTTGCTTCGTAAC
CGTCTTGTTGCAACAGCACGCATAAGTATGAGAAAGAACTCAAGCTTAAGTCAATTGTAT
GGAAATATGCAAGAAGCTTATCAGCAAATGCAGACCCCTTTGATCTACCAGGAGCCCTCA
GCTCGAGGACTAAAGGAGTTAAAAGAATCAACAATTCAATTGGCTTCAAGCATGGGGGCA
ATTGATGCCCCAGTTGATGAGACGGTATTTGATGTTGAGAAGGAGATTGATGACCTACTG
CCTGTGGAGGTGAAAGAACAGCGCCTGAGCAACTTGCTTCAAGCCGCAGCAGTTGGTGGA
TGTGTTGCAGCCATGCCTATCCTTAAAATGATCCCAACCTCAGTACTTTGGGGCTACTTT
GCCTTCATGGCCATTGAAAGTTTACCAGGTAACCAGTTTTGGGAAAGGATTTTATTGCTC
TTCACCGCACCAAGCAGAAGATACAAAGTTCTAGAGGAGTATCATGCCACCTTCGTGGAA
ACTGTGCCTTTCAAGAGTATTGCGACATTTACAATTTTCCAAACAGCATACTTGCTTATC
TGTTTTGGGATCACATGGGTTCCAATTGCAGGGTTGTTGTTCCCTTTGATGATCATGCTT
TTGGTTCCTGTGAGACAATACTTTCTGCCCAAGTTTTTCAAAGGGGCACACCTTCAAGAT
TTAGATGCAGCAGAGTATGAAGAGGCACCAGCTTTACCTTTCAATCTTGCAATGGAGGGA
GAGATGGGGGCTGGAGCTTCTTTGGCAGAGGGTGGAGAGATTTTAGATGAAATAATTACT
AGAAGCCGTGGTGAAATTAGGCATATGTGCAGTCCTAAGATCACAAGCTCCACTGCAACA
CCAACAAAAGATCCCAGAAACTTTCAGAGTCCTCGTCTATCAGAAAAAGCATACAGCCCT
CGAGTAAGCGAACTAAGAGGGGAGCATAGTCCTCAATCAAGCGGGAGAGGGAAATACAGT
CCAAAGACAGGAGAAGTGAAGCCGTCTAACTTGGGAAAAAGTCCACATTCCTCAAACTAA
TGAGAAGAATTAGCTAGTTTAATAAATCTCTCTCTCTACTAAGTTCAATATTTGCTTTCT
TGTTGCACCATCTCTTTTCAATGTTGTCTTGGACCCTTGACTGGAAATTATATAAACCCT
CTCCTTTAGCAAAGAGGGGAGTTGTAACCATAGAATTGTTTGGTCCTTCTGTTTCAACAA
TTCTAGTGACTACTACTCTCTTCTTGTA