Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g01530.t01
CDS Infomation

cds chromosome:12X:7:4047406:4055133:-1 gene:VIT_07s0005g01530 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:D7U2J1]
Sequence

ATGGCGCACACATGCGTCGCATTCAATTCTCTCATCTTCTCCTCAAACCCTACTTCTTCT
TCCGATTCTCACAAGCTTTCTTTTTCCTCTAGGAAATTTACAAAATTGGTTGGGAGTGAA
AAAAGACTTCGGGTTGCGCCAGTGAAGGCTGCCTATTCTGGGGAGTTTTGGGCGCCGGAC
AAGAATTCTAGGCAGGGAACTTGGTCCATTAGGGATGATTTGCAAATCCCATCTTCGGCC
TACTTCCCTACATATGCACAAGGAGGGCAAGGGCCGCCTCCAATGGTGCAGGAGCGTTTT
CAGAGTGTCGTCAGTCAGCTTTTTCAACATAGAATAATCCGATGTGGTGGAGCTGTTGAT
GATGATATGGCAAACATCATAGTGGCTCAGCTTCTCTATCTTGATGCTGTTGATCCTGAC
AAGGATATTGTCATGTATGTGAACTCTCCAGGAGGATCAGTTACAGCTGGCATGGCTATA
TTCGACACAATGAGGCATATCCGACCTGATGTTTCCACTGTGTGTGTTGGACTAGCAGCC
AGCATGGGAGCATTCCTGCTTAGCTGTGGCACCAAGGGAAAAAGATATAGCTTGCCAAAC
TCAAGGATCATGATCCATCAGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGAT
ATTCAGGCAAATGAAATGCTGCATCACAAGGCTAATCTGAATGGGTATCTCTCCTACCAC
ACCGGTCAGAGCCTTGAGAAGATCAACCAAGACACTGATCGTGATTTCTTCATGAGCGCA
AAAGAAGCCAAGGAGTATGGACTTATAGATGGCGTTATCTTGAATCCTCTAAAGGCTCTC
AAGCCTCTGGTGGCTACTGCAGATCAGTGA

Peptide Sequence

PEP ID

VIT_07s0005g01530.t01
PEP Infomation

pep chromosome:12X:7:4047406:4055133:-1 gene:VIT_07s0005g01530 transcript:VIT_07s0005g01530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:D7U2J1]
Sequence

MAHTCVAFNSLIFSSNPTSSSDSHKLSFSSRKFTKLVGSEKRLRVAPVKAAYSGEFWAPD
KNSRQGTWSIRDDLQIPSSAYFPTYAQGGQGPPPMVQERFQSVVSQLFQHRIIRCGGAVD
DDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAA
SMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH
TGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALKPLVATADQ

Transcript Sequence

Transcript ID

VIT_07s0005g01530.t01
Transcript Infomation

cdna chromosome:12X:7:4047406:4055133:-1 gene:VIT_07s0005g01530 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL;Acc:D7U2J1]
Sequence

GGATAAGATACAGACGCAAGAGGAGGGAAGTGAAGGCCAAAATGGCGCACACATGCGTCG
CATTCAATTCTCTCATCTTCTCCTCAAACCCTACTTCTTCTTCCGATTCTCACAAGCTTT
CTTTTTCCTCTAGGAAATTTACAAAATTGGTTGGGAGTGAAAAAAGACTTCGGGTTGCGC
CAGTGAAGGCTGCCTATTCTGGGGAGTTTTGGGCGCCGGACAAGAATTCTAGGCAGGGAA
CTTGGTCCATTAGGGATGATTTGCAAATCCCATCTTCGGCCTACTTCCCTACATATGCAC
AAGGAGGGCAAGGGCCGCCTCCAATGGTGCAGGAGCGTTTTCAGAGTGTCGTCAGTCAGC
TTTTTCAACATAGAATAATCCGATGTGGTGGAGCTGTTGATGATGATATGGCAAACATCA
TAGTGGCTCAGCTTCTCTATCTTGATGCTGTTGATCCTGACAAGGATATTGTCATGTATG
TGAACTCTCCAGGAGGATCAGTTACAGCTGGCATGGCTATATTCGACACAATGAGGCATA
TCCGACCTGATGTTTCCACTGTGTGTGTTGGACTAGCAGCCAGCATGGGAGCATTCCTGC
TTAGCTGTGGCACCAAGGGAAAAAGATATAGCTTGCCAAACTCAAGGATCATGATCCATC
AGCCTCTCGGTGGAGCTCAAGGTGGGCAAACTGACATAGATATTCAGGCAAATGAAATGC
TGCATCACAAGGCTAATCTGAATGGGTATCTCTCCTACCACACCGGTCAGAGCCTTGAGA
AGATCAACCAAGACACTGATCGTGATTTCTTCATGAGCGCAAAAGAAGCCAAGGAGTATG
GACTTATAGATGGCGTTATCTTGAATCCTCTAAAGGCTCTCAAGCCTCTGGTGGCTACTG
CAGATCAGTGAAGTCTTGTTTGGCATGAAACTTGCCATAGTGATTGCTGCAATGAATTTT
GTAGAGTTAATGGGACTGATATTTAATTGCTGAATCATATTTATTTCTATGGGCCACAGG
AAATTAATCTCTGGTACTGATTTCCTGGAACTAAAGCTTGAGAAATGGGTTGACTCTGAA
CAAATGTTGACTTTGTGCTTTAAGGGAAGGGTTTGTGGGAGGTTCCAGGCTCAAGTCTGG
GAACAAAAATTTGCTTATCAAAAAAACAAAAGGCACCCATCATGCTGATATAGTAATACA