Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g01410.t01
CDS Infomation

cds chromosome:12X:7:3925987:3927705:-1 gene:VIT_07s0005g01410 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA adenine N(6)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6HZ97]
Sequence

ATGGCGGGAGGGAAGATGAAGAAGGAGAAGCCATCTCATGGTGCTTCAGCTTCAAAGCAC
TACCAAGGCGGCGTGACGTTCCATAAATCCAAAGGACAGCACATACTGAAGAACCCATTG
TTGGTGGACTCCATAGTCGAGAAATCTGGAATCAAGAGCACCGATGTCATCCTCGAGATC
GGTCCTGGTACAGGTAATCTCACCAAGAAGCTTCTAGAAGCCGGAAAGTCCGTTATTGCC
GTCGAGGTCGATCCTCGTATGGTTCTCGAACTCCAGCGTCGTTTTCAAGGCACCCCTTTA
TCCAATCGGTTAAAGGTTATACAAGGAGATGTGCTCAGGTGTGATCTTCCATATTTTGAT
ATTTGTGTGGCGAATATCCCTTATCAGATATCTTCTCCTCTCACATTCAAGTTGTTGGCA
CACAGACCCGTCTTCAGATGCGCTGTTATAATGTTCCAGAGAGAATTTGCAATGAGACTG
GTTGCTCAACCTGGTGACAATCTCTACTGCCGTCTTTCTGTGAACACCCAGCTTCTAGCG
CGGGTATCCCATCTTCTCAAAGTGGGGAAGAATAATTTCAGGCCTCCACCCAAGGTGGAT
TCCTCTGTAGTTCGGATAGAGCCAAGAAAACCTCTTCCTCCTGTCAATTTCAAGGAGTGG
GATGGATTAGTCCGACTTTGTTTCAATAGGAAGAACAAAACCCTTGGCTCTATCTTCAGG
CAGAAAAGTGTGCTCTCCTTGTTGGAGAAGAACTACAAGACCGTGCAGGCACTACAACTA
TCAGGTCCATCTGGGGATGCTGAGACAGAAATGGATTTAACGGGATTTGGGGATGCTAAT
GAGGATCAAAGCATGGATTTGGATGATGGAAGAGATGATGAAATGGAGGTAGTGGATGGT
AACGCAGGAGGGGAGGCTTCTGATTTCAAAGAAAAGGTTTTGAACATCTTGAAGCAGGGA
AATTTTGAAGATAAGAGATCATCCAAGCTTACACAAGTAGATTTCTTATACTTGCTCTCT
TTGTTCAACAAGGATGGCATACACTTCTCTTGA

Peptide Sequence

PEP ID

VIT_07s0005g01410.t01
PEP Infomation

pep chromosome:12X:7:3925987:3927705:-1 gene:VIT_07s0005g01410 transcript:VIT_07s0005g01410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA adenine N(6)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6HZ97]
Sequence

MAGGKMKKEKPSHGASASKHYQGGVTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEI
GPGTGNLTKKLLEAGKSVIAVEVDPRMVLELQRRFQGTPLSNRLKVIQGDVLRCDLPYFD
ICVANIPYQISSPLTFKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRLSVNTQLLA
RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFR
QKSVLSLLEKNYKTVQALQLSGPSGDAETEMDLTGFGDANEDQSMDLDDGRDDEMEVVDG
NAGGEASDFKEKVLNILKQGNFEDKRSSKLTQVDFLYLLSLFNKDGIHFS

Transcript Sequence

Transcript ID

VIT_07s0005g01410.t01
Transcript Infomation

cdna chromosome:12X:7:3925987:3927705:-1 gene:VIT_07s0005g01410 gene_biotype:protein_coding transcript_biotype:protein_coding description:rRNA adenine N(6)-methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6HZ97]
Sequence

TCCAATCTACTCTCTCCGCCAACGTTGAGTCTTCAAAGCCCTAACCGTAACCGTAGTCCT
GGTGTCTTTGCGGAAATGGCGGGAGGGAAGATGAAGAAGGAGAAGCCATCTCATGGTGCT
TCAGCTTCAAAGCACTACCAAGGCGGCGTGACGTTCCATAAATCCAAAGGACAGCACATA
CTGAAGAACCCATTGTTGGTGGACTCCATAGTCGAGAAATCTGGAATCAAGAGCACCGAT
GTCATCCTCGAGATCGGTCCTGGTACAGGTAATCTCACCAAGAAGCTTCTAGAAGCCGGA
AAGTCCGTTATTGCCGTCGAGGTCGATCCTCGTATGGTTCTCGAACTCCAGCGTCGTTTT
CAAGGCACCCCTTTATCCAATCGGTTAAAGGTTATACAAGGAGATGTGCTCAGGTGTGAT
CTTCCATATTTTGATATTTGTGTGGCGAATATCCCTTATCAGATATCTTCTCCTCTCACA
TTCAAGTTGTTGGCACACAGACCCGTCTTCAGATGCGCTGTTATAATGTTCCAGAGAGAA
TTTGCAATGAGACTGGTTGCTCAACCTGGTGACAATCTCTACTGCCGTCTTTCTGTGAAC
ACCCAGCTTCTAGCGCGGGTATCCCATCTTCTCAAAGTGGGGAAGAATAATTTCAGGCCT
CCACCCAAGGTGGATTCCTCTGTAGTTCGGATAGAGCCAAGAAAACCTCTTCCTCCTGTC
AATTTCAAGGAGTGGGATGGATTAGTCCGACTTTGTTTCAATAGGAAGAACAAAACCCTT
GGCTCTATCTTCAGGCAGAAAAGTGTGCTCTCCTTGTTGGAGAAGAACTACAAGACCGTG
CAGGCACTACAACTATCAGGTCCATCTGGGGATGCTGAGACAGAAATGGATTTAACGGGA
TTTGGGGATGCTAATGAGGATCAAAGCATGGATTTGGATGATGGAAGAGATGATGAAATG
GAGGTAGTGGATGGTAACGCAGGAGGGGAGGCTTCTGATTTCAAAGAAAAGGTTTTGAAC
ATCTTGAAGCAGGGAAATTTTGAAGATAAGAGATCATCCAAGCTTACACAAGTAGATTTC
TTATACTTGCTCTCTTTGTTCAACAAGGATGGCATACACTTCTCTTGATCTCCACCATGA
TAACTTACTTTGAGTAATATCCAATTTTGTCTTTGCTAGCTTTGCTGAAACTGAATATTT
TTGGGGGATTTTTTGTGGGTTCTATAAAATATA