Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g01290.t01
CDS Infomation

cds chromosome:12X:7:3832985:3835753:-1 gene:VIT_07s0005g01290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTACTTCTCCATCTGTTGCCGGTGGGGAAAAGAAGCACTGGTGGCTCAGGAACAAA
AAGATCGTGGACAAGTATGTGAAAGACGCTCGATGCCTGATTGCGACTCAAGAACAGAGC
GAGATCGCAACAGCTCTCAATCTCCTGGACGCGGCTCTGGGTTTGTCGCCGCGCTTCGAA
GTGGCTCTGGAGCTCAAAGCTCGGTCTCTTCTCTATCTCCGGCGATTCAAGGACGTCGCG
GATATGCTTCAGGACTACATTCCCAGTCTCAAAATGGTGTCCGATGATTCTTCCTCCGAC
AACTCGTCTCAACAGCTCTCCAGGGAGCGAGTCAAGCTTCTGTCCTCTTCCAACAACTCA
TCCTCCGACTCACCGATTCGTGACCCATCTTTCAAGTGCTTTTCGGTTTCGGACCTGAAG
AAGAAGGTCATGGCTGGGCTCTGTAAAAACTGCGAAAAAGAAGGGCAATGGAGGTACTTG
GTTCTTGGCCAAGCTTGTTGCCACCTTGGCCTAATGGAGGACGCCATGGTTCTTCTCCAG
ACCGGAAAACGCCTTGCCATGGCCGCGCTCCGGCGAGAGAGCATATGCTGGTCGGACGAC
AGCTTCTCATTGTCCAATTTTCCGATCACCAACGACATAACCACCAACAACGCCCCAGCG
ACGCCGCCCAGAACAGAGTTCGAGAGCATCACACAGCTTCTCAGCCACATTAAGCTCCTC
CTCCGCCGCAAGACCGCCGCTCTGGCTGCCCTCGACGCTGGCCTCTACTCCGAGGCCATC
CGCCACTTCTCAAAGATCCTTGATGGTCGCCGCGGCGCCCCACAAGGGTTCCTTTCCGAA
TGCTTCATGCACCGAGCCACCGCCTATCGATCGGCGGGTCGAATTGCAGAGTCTATAGCT
GATTGTAATCGAACTTTGGCTCTGGACCCGACTTGTATTCAGGCTCTCAGCACCAGAGCT
TCTCTTCTTGAATCGATCAGATGCTTACCTGATTGTCTTCACGATCTGGAGCACCTGAAG
CTTCTGTACAATTCGATTTTGCGGGATCGAAAGCTTCCAGGGCCTGCTTGGAAGAGGCAC
AATGTGCAGTATAGGGAGATTCCAGGAAAGCTTTGCGCATTGTCCACGAAAATTCAGGAG
CTGAAACAGAGGGTTGTTTCTGGGGAGACTGGGAACGTTGATTACTACGCTTTGATTGGG
CTGAGACGTGGGTGTTCGAGGTCTGAATTGGAGAGAGCCCATTTGCTGCTTTGTCTAAGG
CACAAGCCTGATAAAGCTACAAACTTTGTGGAGCGGTGCGAGTTTTCGGATGATCGTGAT
CTGGATTCAGTCAAGGACAGGGCCAAGATGTCTGCTTTGTTGCTCTACAGATTGCTGCAG
AAGGGGTATTCAAGCGTAATGGCCACAATCATGGACGAAGAAGCAGCGGAGAAACAAAGG
AAAAAGGCAGCAGCAGCTCTACAAGCGACAGCAATACAAGCCCAACAGACCCAAGAGCAA
CCCAAGAAGGAATCAGAACTCGAAAACCAAGCCACAGCGGCGCCCCAACAGCAAACTTCA
ACTGCATCAGTTTTTCAAGGTGTGTTCTGCAGAGACCTTGCTGTAGTTGGAAATCTACTG
TCACAAGCTGGGTTCAATCGTCAAATTCCGGTGAAGTACGAGGCACTGAGCTGCTGA

Peptide Sequence

PEP ID

VIT_07s0005g01290.t01
PEP Infomation

pep chromosome:12X:7:3832985:3835753:-1 gene:VIT_07s0005g01290 transcript:VIT_07s0005g01290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATSPSVAGGEKKHWWLRNKKIVDKYVKDARCLIATQEQSEIATALNLLDAALGLSPRFE
VALELKARSLLYLRRFKDVADMLQDYIPSLKMVSDDSSSDNSSQQLSRERVKLLSSSNNS
SSDSPIRDPSFKCFSVSDLKKKVMAGLCKNCEKEGQWRYLVLGQACCHLGLMEDAMVLLQ
TGKRLAMAALRRESICWSDDSFSLSNFPITNDITTNNAPATPPRTEFESITQLLSHIKLL
LRRKTAALAALDAGLYSEAIRHFSKILDGRRGAPQGFLSECFMHRATAYRSAGRIAESIA
DCNRTLALDPTCIQALSTRASLLESIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRH
NVQYREIPGKLCALSTKIQELKQRVVSGETGNVDYYALIGLRRGCSRSELERAHLLLCLR
HKPDKATNFVERCEFSDDRDLDSVKDRAKMSALLLYRLLQKGYSSVMATIMDEEAAEKQR
KKAAAALQATAIQAQQTQEQPKKESELENQATAAPQQQTSTASVFQGVFCRDLAVVGNLL
SQAGFNRQIPVKYEALSC

Transcript Sequence

Transcript ID

VIT_07s0005g01290.t01
Transcript Infomation

cdna chromosome:12X:7:3832985:3835753:-1 gene:VIT_07s0005g01290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCAGGCCACGAAGCTTGTGAGACAAGAGAGAGAATTGTGAGAGAGAATATGTGGTGATGC
CAGCGATGAAGTTGAAGGATCAAAGCTTTCCCTGAGGTCAAAGCTGGCATTTCTTCTAGG
GTTTTTGTTTAAATCTCTCTCCATTCCTCTTTTCTCTCTTCTATAATGCTCCTATTCTCT
CTCCTTCCATGGACTCCAAAATGTGAATGCGAATGCCAATGAATTTGAAGGAGTAGTTGA
TGCTTGCTACTTGATCCTTGGGCTGAAACTATGGCTACTTCTCCATCTGTTGCCGGTGGG
GAAAAGAAGCACTGGTGGCTCAGGAACAAAAAGATCGTGGACAAGTATGTGAAAGACGCT
CGATGCCTGATTGCGACTCAAGAACAGAGCGAGATCGCAACAGCTCTCAATCTCCTGGAC
GCGGCTCTGGGTTTGTCGCCGCGCTTCGAAGTGGCTCTGGAGCTCAAAGCTCGGTCTCTT
CTCTATCTCCGGCGATTCAAGGACGTCGCGGATATGCTTCAGGACTACATTCCCAGTCTC
AAAATGGTGTCCGATGATTCTTCCTCCGACAACTCGTCTCAACAGCTCTCCAGGGAGCGA
GTCAAGCTTCTGTCCTCTTCCAACAACTCATCCTCCGACTCACCGATTCGTGACCCATCT
TTCAAGTGCTTTTCGGTTTCGGACCTGAAGAAGAAGGTCATGGCTGGGCTCTGTAAAAAC
TGCGAAAAAGAAGGGCAATGGAGGTACTTGGTTCTTGGCCAAGCTTGTTGCCACCTTGGC
CTAATGGAGGACGCCATGGTTCTTCTCCAGACCGGAAAACGCCTTGCCATGGCCGCGCTC
CGGCGAGAGAGCATATGCTGGTCGGACGACAGCTTCTCATTGTCCAATTTTCCGATCACC
AACGACATAACCACCAACAACGCCCCAGCGACGCCGCCCAGAACAGAGTTCGAGAGCATC
ACACAGCTTCTCAGCCACATTAAGCTCCTCCTCCGCCGCAAGACCGCCGCTCTGGCTGCC
CTCGACGCTGGCCTCTACTCCGAGGCCATCCGCCACTTCTCAAAGATCCTTGATGGTCGC
CGCGGCGCCCCACAAGGGTTCCTTTCCGAATGCTTCATGCACCGAGCCACCGCCTATCGA
TCGGCGGGTCGAATTGCAGAGTCTATAGCTGATTGTAATCGAACTTTGGCTCTGGACCCG
ACTTGTATTCAGGCTCTCAGCACCAGAGCTTCTCTTCTTGAATCGATCAGATGCTTACCT
GATTGTCTTCACGATCTGGAGCACCTGAAGCTTCTGTACAATTCGATTTTGCGGGATCGA
AAGCTTCCAGGGCCTGCTTGGAAGAGGCACAATGTGCAGTATAGGGAGATTCCAGGAAAG
CTTTGCGCATTGTCCACGAAAATTCAGGAGCTGAAACAGAGGGTTGTTTCTGGGGAGACT
GGGAACGTTGATTACTACGCTTTGATTGGGCTGAGACGTGGGTGTTCGAGGTCTGAATTG
GAGAGAGCCCATTTGCTGCTTTGTCTAAGGCACAAGCCTGATAAAGCTACAAACTTTGTG
GAGCGGTGCGAGTTTTCGGATGATCGTGATCTGGATTCAGTCAAGGACAGGGCCAAGATG
TCTGCTTTGTTGCTCTACAGATTGCTGCAGAAGGGGTATTCAAGCGTAATGGCCACAATC
ATGGACGAAGAAGCAGCGGAGAAACAAAGGAAAAAGGCAGCAGCAGCTCTACAAGCGACA
GCAATACAAGCCCAACAGACCCAAGAGCAACCCAAGAAGGAATCAGAACTCGAAAACCAA
GCCACAGCGGCGCCCCAACAGCAAACTTCAACTGCATCAGTTTTTCAAGGTGTGTTCTGC
AGAGACCTTGCTGTAGTTGGAAATCTACTGTCACAAGCTGGGTTCAATCGTCAAATTCCG
GTGAAGTACGAGGCACTGAGCTGCTGACAAAATGGCCGTGAAATCCAACTCTAGCATAGT
TTACCGGCGGGGGGAGTGAACCGGGACCCAATTTATTTTCTATTTGTACAAAAGGAAAAT
TTACAGAATGCCGGAAAATTTTGTCACCCTTTCTTTCTTTTTCCTATCCACTGTACATAC
ACCCTTCTTTTTCCCAGTATTGGATATTTCTCTTTGTTGGATTTTTCCTAGATTAAAGAC
GAAGTCATTTTCTT