Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g00730.t01
CDS Infomation

cds chromosome:12X:7:3365325:3368216:1 gene:VIT_07s0005g00730 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HZ64]
Sequence

ATGTACAACCACAGAGCAAGAGCTAAATTCTTGCTGTCTCTTCTCTCCATTTCCGCCTTT
GCTTTTCTCCTACTCACCACAGTGAAACCTCTGAAAAAGAGCCCAAAAAACACTGAAATC
CCGCAACTGCATCTCCACAAGCATGTCCAGATTGCCCATTCCCATTGCGAAGGCACTCTC
TATCCAGAGCTCTGTGTCTCAACTCTCTCCACATTCCCGGATCTTGCGTCTAAAACTGTC
CCGGAAGTCATCGCTGCTACAGTGAGCCACACAGTGGGCGAAGTTAAGTTGTCAGCCTCG
AACTGCAGCGGCATTCGGAGGAAGCTCAAGAACCTCAACACCCTTGAAGGCAGAGCTATC
AACGACTGCCTTGAGCTCCATGACTGCACCATTGCTCAGCTTCAGTCCACTATTTCTGAT
CTTTCTCACAATAACTCGCCCGCAAAGCATTACCATGACTTGCAGACGTTGTTGAGCGGT
TCGATAACGAATCTCTACACTTGTCTTGATGGGTTTGCTTACAGTAAAAAGCACATTCGG
AGTTCAATCGAAGGCCCTCTCCGCAACATCTCTCACCATGTCAGTAACTCTCTGGCAATG
CTCAAGAAAATCCCAGGAGTCCAGTCATCGAAGTCTGAGATTTTCCCGGAGTACGGTAGC
ACGAAGGATGGTTTTCCGGCGTGGCTGTCCGGGAAGGACAGGAGACTGTTGCAGGCGTCG
GCGAGTCAAATTCATTACAATCTCACCGTGGCCAAGGATGGCAGTGGAGACTTCACCACC
ATTGGGGAAGCCATTGCAGCTGCTCCCAACTCCAGCACTACCAGGTTTGTGATACATATA
AAGGCAGGTGCTTACTTTGAGTACTTAGATATTGCGAGGTCGAAGACGATGCTGATGTTG
GTGGGAGACGGGCTCGAGAATACTTACATCAAGGGCAACCGAAGTGTGGGTGGTGGGTGG
ACCACTTTCCAATCGGGCACTGTCGCCGTGGTGGCAAACAATTTCATAGCCAAAGGCATC
TCCTTCGAGAACTACGCAGGGCCGAGCAATCACCAAGCAGTGGCCCTGAGGAGTGGAGCC
GACCTCTCCGTCTTCTACCTGTGCCGCTTCATCGGTTACCAAGACACCCTCTACGTCCAC
TCTCTCCGCCAATTCTACCGTGAATGCGACGTCTACGGAACCATAGATTTCATCTTCGGA
AACGCTGCAGTCGTTCTCCAAAACTGCAACTTATACGCCCGCAGACCTAACGCAAACCAG
AAAAATGTCTTCACCGCCCAAGGGAGAGATGACCCCAACGAAAACACCGGAATCTCAATA
CAAAATTGCAAAGTCGCTGCGGCTGCGGACTTGATTCCGGTCCTATCTTCATTCAAATCG
TACCTAGGAAGGCCATGGAAGGAGTATTCGAGGACGGTTTATATGCAGTCTAACATTGGC
AATTTGATTGACCCAGCTGGGTGGCTGGAGTGGGATGGAGATTTTGCATTGAGTACTCTT
TATTATGGTGAGTATAAGAACCGGGGTCCAGGTTCCAACACCAGCGGCAGGGTGACATGG
CCGGGTTATAGAGTTATTAATAGTTCGAGTGTGGCGAGTCAGTTCACTGTTGGGGCCTTC
ATTCAGGGAGATGAATGGCTTCCAGCTACTGGGATTCCTTATTATTCCAATTTGACCATC
GTTTAG

Peptide Sequence

PEP ID

VIT_07s0005g00730.t01
PEP Infomation

pep chromosome:12X:7:3365325:3368216:1 gene:VIT_07s0005g00730 transcript:VIT_07s0005g00730.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HZ64]
Sequence

MYNHRARAKFLLSLLSISAFAFLLLTTVKPLKKSPKNTEIPQLHLHKHVQIAHSHCEGTL
YPELCVSTLSTFPDLASKTVPEVIAATVSHTVGEVKLSASNCSGIRRKLKNLNTLEGRAI
NDCLELHDCTIAQLQSTISDLSHNNSPAKHYHDLQTLLSGSITNLYTCLDGFAYSKKHIR
SSIEGPLRNISHHVSNSLAMLKKIPGVQSSKSEIFPEYGSTKDGFPAWLSGKDRRLLQAS
ASQIHYNLTVAKDGSGDFTTIGEAIAAAPNSSTTRFVIHIKAGAYFEYLDIARSKTMLML
VGDGLENTYIKGNRSVGGGWTTFQSGTVAVVANNFIAKGISFENYAGPSNHQAVALRSGA
DLSVFYLCRFIGYQDTLYVHSLRQFYRECDVYGTIDFIFGNAAVVLQNCNLYARRPNANQ
KNVFTAQGRDDPNENTGISIQNCKVAAAADLIPVLSSFKSYLGRPWKEYSRTVYMQSNIG
NLIDPAGWLEWDGDFALSTLYYGEYKNRGPGSNTSGRVTWPGYRVINSSSVASQFTVGAF
IQGDEWLPATGIPYYSNLTIV

Transcript Sequence

Transcript ID

VIT_07s0005g00730.t01
Transcript Infomation

cdna chromosome:12X:7:3365325:3368216:1 gene:VIT_07s0005g00730 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HZ64]
Sequence

TCACATTGAGGTTGTGAAATCCAAACACCAATCCCCATGACTCATCAGCTGCCCTATATA
TGATATATCCTTCTTCTTCTTCTCGCTTACCTTCTCCTTCAATTTCAACCTTTATCTCTT
CCTCTCAACACACCATTTCACCATGTACAACCACAGAGCAAGAGCTAAATTCTTGCTGTC
TCTTCTCTCCATTTCCGCCTTTGCTTTTCTCCTACTCACCACAGTGAAACCTCTGAAAAA
GAGCCCAAAAAACACTGAAATCCCGCAACTGCATCTCCACAAGCATGTCCAGATTGCCCA
TTCCCATTGCGAAGGCACTCTCTATCCAGAGCTCTGTGTCTCAACTCTCTCCACATTCCC
GGATCTTGCGTCTAAAACTGTCCCGGAAGTCATCGCTGCTACAGTGAGCCACACAGTGGG
CGAAGTTAAGTTGTCAGCCTCGAACTGCAGCGGCATTCGGAGGAAGCTCAAGAACCTCAA
CACCCTTGAAGGCAGAGCTATCAACGACTGCCTTGAGCTCCATGACTGCACCATTGCTCA
GCTTCAGTCCACTATTTCTGATCTTTCTCACAATAACTCGCCCGCAAAGCATTACCATGA
CTTGCAGACGTTGTTGAGCGGTTCGATAACGAATCTCTACACTTGTCTTGATGGGTTTGC
TTACAGTAAAAAGCACATTCGGAGTTCAATCGAAGGCCCTCTCCGCAACATCTCTCACCA
TGTCAGTAACTCTCTGGCAATGCTCAAGAAAATCCCAGGAGTCCAGTCATCGAAGTCTGA
GATTTTCCCGGAGTACGGTAGCACGAAGGATGGTTTTCCGGCGTGGCTGTCCGGGAAGGA
CAGGAGACTGTTGCAGGCGTCGGCGAGTCAAATTCATTACAATCTCACCGTGGCCAAGGA
TGGCAGTGGAGACTTCACCACCATTGGGGAAGCCATTGCAGCTGCTCCCAACTCCAGCAC
TACCAGGTTTGTGATACATATAAAGGCAGGTGCTTACTTTGAGTACTTAGATATTGCGAG
GTCGAAGACGATGCTGATGTTGGTGGGAGACGGGCTCGAGAATACTTACATCAAGGGCAA
CCGAAGTGTGGGTGGTGGGTGGACCACTTTCCAATCGGGCACTGTCGCCGTGGTGGCAAA
CAATTTCATAGCCAAAGGCATCTCCTTCGAGAACTACGCAGGGCCGAGCAATCACCAAGC
AGTGGCCCTGAGGAGTGGAGCCGACCTCTCCGTCTTCTACCTGTGCCGCTTCATCGGTTA
CCAAGACACCCTCTACGTCCACTCTCTCCGCCAATTCTACCGTGAATGCGACGTCTACGG
AACCATAGATTTCATCTTCGGAAACGCTGCAGTCGTTCTCCAAAACTGCAACTTATACGC
CCGCAGACCTAACGCAAACCAGAAAAATGTCTTCACCGCCCAAGGGAGAGATGACCCCAA
CGAAAACACCGGAATCTCAATACAAAATTGCAAAGTCGCTGCGGCTGCGGACTTGATTCC
GGTCCTATCTTCATTCAAATCGTACCTAGGAAGGCCATGGAAGGAGTATTCGAGGACGGT
TTATATGCAGTCTAACATTGGCAATTTGATTGACCCAGCTGGGTGGCTGGAGTGGGATGG
AGATTTTGCATTGAGTACTCTTTATTATGGTGAGTATAAGAACCGGGGTCCAGGTTCCAA
CACCAGCGGCAGGGTGACATGGCCGGGTTATAGAGTTATTAATAGTTCGAGTGTGGCGAG
TCAGTTCACTGTTGGGGCCTTCATTCAGGGAGATGAATGGCTTCCAGCTACTGGGATTCC
TTATTATTCCAATTTGACCATCGTTTAGTAATTTGTATTTTTATGTGGCGTGGTTTCAAG
TCTTGGGCAGAGATTGCTCCAAACGATTGAGAATAAGTTCTTCAAGTAAAATGTCACGTT
ATTTGATTGCACCTTTGAATC